RNA–Protein interactions for RNA: ENST00000371655.3

RAB3B-201, Transcript of RAB3B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3B, Length 12,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3B-201ENST00000371655 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
RAB3B-201ENST00000371655 CNGB1Q14028 1251 aaPredicted RBP8.76□□□□□ -1.01
RAB3B-201ENST00000371655 NEFMP07197 916 aa8.73□□□□□ -1.01
RAB3B-201ENST00000371655 RRP7BPQ9NSQ0 103 aa8.73□□□□□ -1.01
RAB3B-201ENST00000371655 FANCD2Q9BXW9 1451 aa8.72□□□□□ -1.01
RAB3B-201ENST00000371655 TDRD9Q8NDG6 1382 aaKnown RBP8.72□□□□□ -1.01
RAB3B-201ENST00000371655 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.01
RAB3B-201ENST00000371655 ARHGAP35Q9NRY4 1499 aa8.71□□□□□ -1.02
RAB3B-201ENST00000371655 EIF4G2P78344 907 aaKnown RBP eCLIP8.71□□□□□ -1.02
RAB3B-201ENST00000371655 EIF4G1Q04637 1599 aaKnown RBP8.71□□□□□ -1.02
RAB3B-201ENST00000371655 STAG3Q9UJ98 1225 aa8.69□□□□□ -1.02
RAB3B-201ENST00000371655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.69□□□□□ -1.02
RAB3B-201ENST00000371655 HMGXB3Q12766 1538 aa8.69□□□□□ -1.02
RAB3B-201ENST00000371655 DDX10Q13206 875 aaKnown RBP8.68□□□□□ -1.02
RAB3B-201ENST00000371655 SETD5Q9C0A6 1442 aa8.68□□□□□ -1.02
RAB3B-201ENST00000371655 CDCA8Q53HL2 280 aa8.67□□□□□ -1.02
RAB3B-201ENST00000371655 CHGAP10645 457 aaKnown RBP8.67□□□□□ -1.02
RAB3B-201ENST00000371655 KCNH8Q96L42 1107 aa8.66□□□□□ -1.02
RAB3B-201ENST00000371655 CFTRP13569 1480 aa8.66□□□□□ -1.02
RAB3B-201ENST00000371655 BCANQ96GW7 911 aa8.65□□□□□ -1.02
RAB3B-201ENST00000371655 SLC24A1O60721 1099 aa8.64□□□□□ -1.03
RAB3B-201ENST00000371655 KANK4Q5T7N3 995 aaPredicted RBP8.64□□□□□ -1.03
RAB3B-201ENST00000371655 FGD5Q6ZNL6 1462 aa8.63□□□□□ -1.03
RAB3B-201ENST00000371655 IGF1RP08069 1367 aa8.63□□□□□ -1.03
RAB3B-201ENST00000371655 RSPH4AQ5TD94 716 aa8.63□□□□□ -1.03
RAB3B-201ENST00000371655 MRS2Q9HD23 443 aa8.62□□□□□ -1.03
RAB3B-201ENST00000371655 CANXP27824 592 aaKnown RBP8.62□□□□□ -1.03
RAB3B-201ENST00000371655 HNRNPUQ00839 825 aaKnown RBP eCLIP8.61□□□□□ -1.03
RAB3B-201ENST00000371655 RTL5Q5HYW3 569 aaPredicted RBP8.61□□□□□ -1.03
RAB3B-201ENST00000371655 FHOD3Q2V2M9 1422 aa8.61□□□□□ -1.03
RAB3B-201ENST00000371655 ERICH3Q5RHP9 1530 aa8.61□□□□□ -1.03
RAB3B-201ENST00000371655 ANKRD30AQ9BXX3 1397 aa8.6□□□□□ -1.03
RAB3B-201ENST00000371655 CCDC18Q5T9S5 1454 aa8.6□□□□□ -1.03
RAB3B-201ENST00000371655 GAPVD1Q14C86 1478 aa8.6□□□□□ -1.03
RAB3B-201ENST00000371655 TMC1Q8TDI8 760 aa8.6□□□□□ -1.03
RAB3B-201ENST00000371655 ZBTB47Q9UFB7 747 aaPredicted RBP8.6□□□□□ -1.03
RAB3B-201ENST00000371655 KANK1Q14678 1352 aa8.6□□□□□ -1.03
RAB3B-201ENST00000371655 KDM2AQ9Y2K7 1162 aa8.6□□□□□ -1.03
RAB3B-201ENST00000371655 MIER1Q8N108 512 aa8.59□□□□□ -1.03
RAB3B-201ENST00000371655 RUSC2Q8N2Y8 1516 aa8.59□□□□□ -1.03
RAB3B-201ENST00000371655 JPH4Q96JJ6 628 aa8.58□□□□□ -1.04
RAB3B-201ENST00000371655 RAB3GAP2Q9H2M9 1393 aa8.58□□□□□ -1.04
RAB3B-201ENST00000371655 KIF21BO75037 1637 aa8.58□□□□□ -1.04
RAB3B-201ENST00000371655 EFCAB2Q5VUJ9 269 aa8.57□□□□□ -1.04
RAB3B-201ENST00000371655 WDR43Q15061 677 aaKnown RBP eCLIP8.56□□□□□ -1.04
RAB3B-201ENST00000371655 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.56□□□□□ -1.04
RAB3B-201ENST00000371655 CARD11Q9BXL7 1154 aa8.56□□□□□ -1.04
RAB3B-201ENST00000371655 SIN3AQ96ST3 1273 aa8.55□□□□□ -1.04
RAB3B-201ENST00000371655 FAM9BQ8IZU0 186 aa8.55□□□□□ -1.04
RAB3B-201ENST00000371655 PEG3Q9GZU2 1588 aa8.55□□□□□ -1.04
RAB3B-201ENST00000371655 TOP2BQ02880 1626 aa8.54□□□□□ -1.04
RAB3B-201ENST00000371655 BICRAQ9NZM4 1560 aa8.54□□□□□ -1.04
RAB3B-201ENST00000371655 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
RAB3B-201ENST00000371655 PRXQ9BXM0 1461 aa8.53□□□□□ -1.04
RAB3B-201ENST00000371655 CCER2I3L3R5 266 aa8.53□□□□□ -1.04
RAB3B-201ENST00000371655 PTPRGP23470 1445 aa8.53□□□□□ -1.04
RAB3B-201ENST00000371655 RAD54L2Q9Y4B4 1467 aa8.52□□□□□ -1.05
RAB3B-201ENST00000371655 SYNJ1O43426 1573 aa8.52□□□□□ -1.05
RAB3B-201ENST00000371655 RGL3Q3MIN7 710 aa8.52□□□□□ -1.05
RAB3B-201ENST00000371655 IFT140Q96RY7 1462 aa8.52□□□□□ -1.05
RAB3B-201ENST00000371655 CASKIN1Q8WXD9 1431 aa8.51□□□□□ -1.05
RAB3B-201ENST00000371655 GRIN2BQ13224 1484 aa8.51□□□□□ -1.05
RAB3B-201ENST00000371655 MPHOSPH9Q99550 1183 aa8.51□□□□□ -1.05
RAB3B-201ENST00000371655 KNSTRNQ9Y448 316 aa8.51□□□□□ -1.05
RAB3B-201ENST00000371655 EFCAB5A4FU69 1503 aa8.5□□□□□ -1.05
RAB3B-201ENST00000371655 CUX1P39880 1505 aa8.5□□□□□ -1.05
RAB3B-201ENST00000371655 FKBP8Q14318 412 aa8.5□□□□□ -1.05
RAB3B-201ENST00000371655 PKD2Q13563 968 aa8.5□□□□□ -1.05
RAB3B-201ENST00000371655 MRC2Q9UBG0 1479 aa8.5□□□□□ -1.05
RAB3B-201ENST00000371655 CFAP53Q96M91 514 aa8.5□□□□□ -1.05
RAB3B-201ENST00000371655 ANP32AP39687 249 aaKnown RBP8.5□□□□□ -1.05
RAB3B-201ENST00000371655 TMF1P82094 1093 aa8.49□□□□□ -1.05
RAB3B-201ENST00000371655 CC2D2AQ9P2K1 1620 aa8.49□□□□□ -1.05
RAB3B-201ENST00000371655 NUP155O75694 1391 aa8.49□□□□□ -1.05
RAB3B-201ENST00000371655 TOPBP1Q92547 1522 aa8.49□□□□□ -1.05
RAB3B-201ENST00000371655 HIRIP3Q9BW71 556 aaPredicted RBP8.49□□□□□ -1.05
RAB3B-201ENST00000371655 MYOM3Q5VTT5 1437 aa8.48□□□□□ -1.05
RAB3B-201ENST00000371655 HDGFP51858 240 aaKnown RBP8.48□□□□□ -1.05
RAB3B-201ENST00000371655 CCDC136Q96JN2 1154 aa8.47□□□□□ -1.05
RAB3B-201ENST00000371655 DHX57Q6P158 1386 aaKnown RBP8.47□□□□□ -1.05
RAB3B-201ENST00000371655 DNMBPQ6XZF7 1577 aa8.46□□□□□ -1.05
RAB3B-201ENST00000371655 DCAF11Q8TEB1 546 aa8.46□□□□□ -1.06
RAB3B-201ENST00000371655 SPAG9O60271 1321 aaKnown RBP8.46□□□□□ -1.06
RAB3B-201ENST00000371655 FGD6Q6ZV73 1430 aa8.46□□□□□ -1.06
RAB3B-201ENST00000371655 AQRO60306 1485 aaKnown RBP eCLIP8.46□□□□□ -1.06
RAB3B-201ENST00000371655 FYCO1Q9BQS8 1478 aa8.46□□□□□ -1.06
RAB3B-201ENST00000371655 ABCA10Q8WWZ4 1543 aa8.45□□□□□ -1.06
RAB3B-201ENST00000371655 ROCK2O75116 1388 aaKnown RBP8.45□□□□□ -1.06
RAB3B-201ENST00000371655 ARID4BQ4LE39 1312 aaPredicted RBP8.45□□□□□ -1.06
RAB3B-201ENST00000371655 POLA1P09884 1462 aaPredicted RBP8.44□□□□□ -1.06
RAB3B-201ENST00000371655 HSPA5P11021 654 aaKnown RBP8.44□□□□□ -1.06
RAB3B-201ENST00000371655 LAMC3Q9Y6N6 1575 aa8.43□□□□□ -1.06
RAB3B-201ENST00000371655 EIF3AQ14152 1382 aaKnown RBP8.43□□□□□ -1.06
RAB3B-201ENST00000371655 NUDCQ9Y266 331 aa8.43□□□□□ -1.06
RAB3B-201ENST00000371655 ARAP1Q96P48 1450 aa8.43□□□□□ -1.06
RAB3B-201ENST00000371655 LRRC9Q6ZRR7 1453 aa8.43□□□□□ -1.06
RAB3B-201ENST00000371655 RALBP1Q15311 655 aa8.42□□□□□ -1.06
RAB3B-201ENST00000371655 UPF2Q9HAU5 1272 aaKnown RBP8.42□□□□□ -1.06
RAB3B-201ENST00000371655 RRBP1Q9P2E9 1410 aaKnown RBP8.42□□□□□ -1.06
RAB3B-201ENST00000371655 POGKQ9P215 609 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms