RNA–Protein interactions for RNA: ENST00000371088.4

EFCAB7-201, Transcript of EF-hand calcium binding domain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFCAB7, Length 2,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB7-201ENST00000371088 TIAM1Q13009 1591 aa12.24□□□□□ -0.45
EFCAB7-201ENST00000371088 FHOD3Q2V2M9 1422 aa12.24□□□□□ -0.45
EFCAB7-201ENST00000371088 PHLDB1Q86UU1 1377 aa12.24□□□□□ -0.45
EFCAB7-201ENST00000371088 PCF11O94913 1555 aaKnown RBP12.23□□□□□ -0.45
EFCAB7-201ENST00000371088 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
EFCAB7-201ENST00000371088 TOPBP1Q92547 1522 aa12.22□□□□□ -0.45
EFCAB7-201ENST00000371088 RAB3GAP2Q9H2M9 1393 aa12.21□□□□□ -0.45
EFCAB7-201ENST00000371088 FAM50AQ14320 339 aaKnown RBP12.2□□□□□ -0.46
EFCAB7-201ENST00000371088 LRRC9Q6ZRR7 1453 aa12.2□□□□□ -0.46
EFCAB7-201ENST00000371088 DNMBPQ6XZF7 1577 aa12.19□□□□□ -0.46
EFCAB7-201ENST00000371088 MAPKBP1O60336 1514 aa12.17□□□□□ -0.46
EFCAB7-201ENST00000371088 TDRD9Q8NDG6 1382 aaKnown RBP12.17□□□□□ -0.46
EFCAB7-201ENST00000371088 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
EFCAB7-201ENST00000371088 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
EFCAB7-201ENST00000371088 SIN3AQ96ST3 1273 aa12.15□□□□□ -0.46
EFCAB7-201ENST00000371088 SENP3Q9H4L4 574 aaPredicted RBP12.14□□□□□ -0.47
EFCAB7-201ENST00000371088 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
EFCAB7-201ENST00000371088 CFAP43Q8NDM7 1665 aa12.13□□□□□ -0.47
EFCAB7-201ENST00000371088 KCNH8Q96L42 1107 aa12.1□□□□□ -0.47
EFCAB7-201ENST00000371088 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
EFCAB7-201ENST00000371088 SETD5Q9C0A6 1442 aa12.1□□□□□ -0.47
EFCAB7-201ENST00000371088 MAP3K1Q13233 1512 aa12.1□□□□□ -0.47
EFCAB7-201ENST00000371088 HIRIP3Q9BW71 556 aaPredicted RBP12.09□□□□□ -0.47
EFCAB7-201ENST00000371088 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
EFCAB7-201ENST00000371088 CTTNBP2Q8WZ74 1663 aa12.07□□□□□ -0.48
EFCAB7-201ENST00000371088 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
EFCAB7-201ENST00000371088 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
EFCAB7-201ENST00000371088 FYCO1Q9BQS8 1478 aa12.06□□□□□ -0.48
EFCAB7-201ENST00000371088 LRRIQ1Q96JM4 1722 aa12.06□□□□□ -0.48
EFCAB7-201ENST00000371088 CUL7Q14999 1698 aa12.05□□□□□ -0.48
EFCAB7-201ENST00000371088 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
EFCAB7-201ENST00000371088 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
EFCAB7-201ENST00000371088 PTPRKQ15262 1439 aa12.04□□□□□ -0.48
EFCAB7-201ENST00000371088 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
EFCAB7-201ENST00000371088 GAPVD1Q14C86 1478 aa12.04□□□□□ -0.48
EFCAB7-201ENST00000371088 EFCAB5A4FU69 1503 aa12.03□□□□□ -0.48
EFCAB7-201ENST00000371088 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
EFCAB7-201ENST00000371088 FGD6Q6ZV73 1430 aa12.01□□□□□ -0.49
EFCAB7-201ENST00000371088 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
EFCAB7-201ENST00000371088 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
EFCAB7-201ENST00000371088 SAMD9Q5K651 1589 aa11.99□□□□□ -0.49
EFCAB7-201ENST00000371088 MAGI3Q5TCQ9 1506 aa11.98□□□□□ -0.49
EFCAB7-201ENST00000371088 AQRO60306 1485 aaKnown RBP eCLIP11.98□□□□□ -0.49
EFCAB7-201ENST00000371088 DDX10Q13206 875 aaKnown RBP11.98□□□□□ -0.49
EFCAB7-201ENST00000371088 FMN1Q68DA7 1419 aa11.98□□□□□ -0.49
EFCAB7-201ENST00000371088 GRIN2BQ13224 1484 aa11.96□□□□□ -0.49
EFCAB7-201ENST00000371088 PDS5BQ9NTI5 1447 aa11.96□□□□□ -0.49
EFCAB7-201ENST00000371088 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.49
EFCAB7-201ENST00000371088 NCOA2Q15596 1464 aa11.96□□□□□ -0.49
EFCAB7-201ENST00000371088 CHIC2Q9UKJ5 165 aa11.95□□□□□ -0.5
EFCAB7-201ENST00000371088 CCDC18Q5T9S5 1454 aa11.95□□□□□ -0.5
EFCAB7-201ENST00000371088 RRP7BPQ9NSQ0 103 aa11.93□□□□□ -0.5
EFCAB7-201ENST00000371088 CDK13Q14004 1512 aaKnown RBP11.92□□□□□ -0.5
EFCAB7-201ENST00000371088 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
EFCAB7-201ENST00000371088 MYOM3Q5VTT5 1437 aa11.91□□□□□ -0.5
EFCAB7-201ENST00000371088 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
EFCAB7-201ENST00000371088 PPP1R15AO75807 674 aaPredicted RBP11.91□□□□□ -0.5
EFCAB7-201ENST00000371088 NAIPQ13075 1403 aa11.9□□□□□ -0.5
EFCAB7-201ENST00000371088 PBRM1Q86U86 1689 aa11.9□□□□□ -0.5
EFCAB7-201ENST00000371088 HFM1A2PYH4 1435 aa11.89□□□□□ -0.51
EFCAB7-201ENST00000371088 KDM6BO15054 1643 aa11.89□□□□□ -0.51
EFCAB7-201ENST00000371088 SUPT16HQ9Y5B9 1047 aaKnown RBP11.89□□□□□ -0.51
EFCAB7-201ENST00000371088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.88□□□□□ -0.51
EFCAB7-201ENST00000371088 UGGT2Q9NYU1 1516 aa11.87□□□□□ -0.51
EFCAB7-201ENST00000371088 SUPT6HQ7KZ85 1726 aaKnown RBP11.87□□□□□ -0.51
EFCAB7-201ENST00000371088 FOXD1Q16676 465 aa11.87□□□□□ -0.51
EFCAB7-201ENST00000371088 ADAMTS12P58397 1594 aa11.86□□□□□ -0.51
EFCAB7-201ENST00000371088 EHBP1L1Q8N3D4 1523 aa11.86□□□□□ -0.51
EFCAB7-201ENST00000371088 TONSLQ96HA7 1378 aa11.86□□□□□ -0.51
EFCAB7-201ENST00000371088 DENND4BO75064 1496 aaPredicted RBP11.86□□□□□ -0.51
EFCAB7-201ENST00000371088 UACAQ9BZF9 1416 aa11.85□□□□□ -0.51
EFCAB7-201ENST00000371088 IQGAP2Q13576 1575 aa11.85□□□□□ -0.51
EFCAB7-201ENST00000371088 THOC2Q8NI27 1593 aaKnown RBP11.85□□□□□ -0.51
EFCAB7-201ENST00000371088 ARHGEF11O15085 1522 aa11.84□□□□□ -0.51
EFCAB7-201ENST00000371088 EPRSP07814 1512 aaKnown RBP11.84□□□□□ -0.51
EFCAB7-201ENST00000371088 KDM5BQ9UGL1 1544 aa11.84□□□□□ -0.51
EFCAB7-201ENST00000371088 ZNF644Q9H582 1327 aaPredicted RBP11.83□□□□□ -0.52
EFCAB7-201ENST00000371088 BCANQ96GW7 911 aa11.82□□□□□ -0.52
EFCAB7-201ENST00000371088 MRC2Q9UBG0 1479 aa11.82□□□□□ -0.52
EFCAB7-201ENST00000371088 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
EFCAB7-201ENST00000371088 WDR62O43379 1518 aa11.81□□□□□ -0.52
EFCAB7-201ENST00000371088 HECW1Q76N89 1606 aa11.81□□□□□ -0.52
EFCAB7-201ENST00000371088 TCOF1Q13428 1488 aaKnown RBP11.77□□□□□ -0.52
EFCAB7-201ENST00000371088 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
EFCAB7-201ENST00000371088 TIMELESSQ9UNS1 1208 aa11.77□□□□□ -0.53
EFCAB7-201ENST00000371088 NUP153P49790 1475 aaKnown RBP11.75□□□□□ -0.53
EFCAB7-201ENST00000371088 GCC2Q8IWJ2 1684 aa11.75□□□□□ -0.53
EFCAB7-201ENST00000371088 KIAA0556O60303 1618 aa11.74□□□□□ -0.53
EFCAB7-201ENST00000371088 EIF4G3O43432 1585 aaKnown RBP11.74□□□□□ -0.53
EFCAB7-201ENST00000371088 FBLN2P98095 1184 aa11.74□□□□□ -0.53
EFCAB7-201ENST00000371088 HSPA5P11021 654 aaKnown RBP11.74□□□□□ -0.53
EFCAB7-201ENST00000371088 MPHOSPH9Q99550 1183 aa11.74□□□□□ -0.53
EFCAB7-201ENST00000371088 ANP32CO43423 234 aa11.73□□□□□ -0.53
EFCAB7-201ENST00000371088 WASHC2AQ641Q2 1341 aa11.73□□□□□ -0.53
EFCAB7-201ENST00000371088 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
EFCAB7-201ENST00000371088 PRG4Q92954 1404 aaPredicted RBP11.72□□□□□ -0.53
EFCAB7-201ENST00000371088 FKBP8Q14318 412 aa11.72□□□□□ -0.53
EFCAB7-201ENST00000371088 L3MBTL2Q969R5 705 aa11.72□□□□□ -0.53
EFCAB7-201ENST00000371088 PLB1Q6P1J6 1458 aa11.72□□□□□ -0.53
EFCAB7-201ENST00000371088 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms