RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 IGF1RP08069 1367 aa26.4■■□□□ 1.82
SS18L1-202ENST00000370848 JPH4Q96JJ6 628 aa26.39■■□□□ 1.82
SS18L1-202ENST00000370848 KIAA0586Q9BVV6 1533 aa26.37■■□□□ 1.81
SS18L1-202ENST00000370848 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
SS18L1-202ENST00000370848 MAPKBP1O60336 1514 aa26.26■■□□□ 1.79
SS18L1-202ENST00000370848 ADCY10Q96PN6 1610 aa26.22■■□□□ 1.79
SS18L1-202ENST00000370848 CARMIL1Q5VZK9 1371 aa26.19■■□□□ 1.78
SS18L1-202ENST00000370848 ABCC10Q5T3U5 1492 aa26.17■■□□□ 1.78
SS18L1-202ENST00000370848 DIP2BQ9P265 1576 aa26.12■■□□□ 1.77
SS18L1-202ENST00000370848 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
SS18L1-202ENST00000370848 CARMIL2Q6F5E8 1435 aa26.03■■□□□ 1.76
SS18L1-202ENST00000370848 NPM1P06748 294 aaKnown RBP eCLIP26.01■■□□□ 1.75
SS18L1-202ENST00000370848 PTPRGP23470 1445 aa26.01■■□□□ 1.75
SS18L1-202ENST00000370848 TNIKQ9UKE5 1360 aa26.01■■□□□ 1.75
SS18L1-202ENST00000370848 DISP1Q96F81 1524 aa25.99■■□□□ 1.75
SS18L1-202ENST00000370848 UGGT2Q9NYU1 1516 aa25.99■■□□□ 1.75
SS18L1-202ENST00000370848 UHRF1BP1LA0JNW5 1464 aa25.99■■□□□ 1.75
SS18L1-202ENST00000370848 RAPGEF2Q9Y4G8 1499 aa25.99■■□□□ 1.75
SS18L1-202ENST00000370848 ABCC2Q92887 1545 aa25.98■■□□□ 1.75
SS18L1-202ENST00000370848 FAM69CQ0P6D2 419 aa25.95■■□□□ 1.74
SS18L1-202ENST00000370848 KIAA0556O60303 1618 aa25.88■■□□□ 1.73
SS18L1-202ENST00000370848 GLI2P10070 1586 aa25.88■■□□□ 1.73
SS18L1-202ENST00000370848 UACAQ9BZF9 1416 aa25.87■■□□□ 1.73
SS18L1-202ENST00000370848 PLB1Q6P1J6 1458 aa25.85■■□□□ 1.73
SS18L1-202ENST00000370848 KDM5BQ9UGL1 1544 aa25.85■■□□□ 1.73
SS18L1-202ENST00000370848 CTTNBP2Q8WZ74 1663 aa25.84■■□□□ 1.73
SS18L1-202ENST00000370848 ASXL2Q76L83 1435 aa25.82■■□□□ 1.72
SS18L1-202ENST00000370848 KDM6BO15054 1643 aa25.82■■□□□ 1.72
SS18L1-202ENST00000370848 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
SS18L1-202ENST00000370848 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
SS18L1-202ENST00000370848 PPRC1Q5VV67 1664 aaKnown RBP25.8■■□□□ 1.72
SS18L1-202ENST00000370848 TSPOAP1O95153 1857 aa25.76■■□□□ 1.71
SS18L1-202ENST00000370848 ZCCHC11Q5TAX3 1644 aaKnown RBP25.74■■□□□ 1.71
SS18L1-202ENST00000370848 MAP3K4Q9Y6R4 1608 aa25.72■■□□□ 1.71
SS18L1-202ENST00000370848 GOLGA3Q08378 1498 aa25.72■■□□□ 1.71
SS18L1-202ENST00000370848 EPRSP07814 1512 aaKnown RBP25.71■■□□□ 1.71
SS18L1-202ENST00000370848 ABCA8O94911 1581 aa25.67■■□□□ 1.7
SS18L1-202ENST00000370848 TTBK1Q5TCY1 1321 aaPredicted RBP25.64■■□□□ 1.7
SS18L1-202ENST00000370848 WDR7Q9Y4E6 1490 aa25.61■■□□□ 1.69
SS18L1-202ENST00000370848 TEX14Q8IWB6 1497 aa25.58■■□□□ 1.69
SS18L1-202ENST00000370848 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
SS18L1-202ENST00000370848 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
SS18L1-202ENST00000370848 SAMD9Q5K651 1589 aa25.52■■□□□ 1.68
SS18L1-202ENST00000370848 CFAP43Q8NDM7 1665 aa25.52■■□□□ 1.68
SS18L1-202ENST00000370848 KDM4FA0A1W2PPD8 638 aa25.5■■□□□ 1.67
SS18L1-202ENST00000370848 MAGI3Q5TCQ9 1506 aa25.5■■□□□ 1.67
SS18L1-202ENST00000370848 EEA1Q15075 1411 aa25.49■■□□□ 1.67
SS18L1-202ENST00000370848 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
SS18L1-202ENST00000370848 CD109Q6YHK3 1445 aa25.38■■□□□ 1.65
SS18L1-202ENST00000370848 ATP10BO94823 1461 aa25.38■■□□□ 1.65
SS18L1-202ENST00000370848 FAM9AQ8IZU1 332 aaPredicted RBP25.35■■□□□ 1.65
SS18L1-202ENST00000370848 ADGRL1O94910 1474 aa25.34■■□□□ 1.65
SS18L1-202ENST00000370848 RAPGEF6Q8TEU7 1601 aa25.34■■□□□ 1.65
SS18L1-202ENST00000370848 ABCA9Q8IUA7 1624 aa25.34■■□□□ 1.65
SS18L1-202ENST00000370848 KIF21BO75037 1637 aa25.31■■□□□ 1.64
SS18L1-202ENST00000370848 ARAP3Q8WWN8 1544 aa25.3■■□□□ 1.64
SS18L1-202ENST00000370848 NUP153P49790 1475 aaKnown RBP25.26■■□□□ 1.63
SS18L1-202ENST00000370848 EFCAB5A4FU69 1503 aa25.25■■□□□ 1.63
SS18L1-202ENST00000370848 PHLDB1Q86UU1 1377 aa25.24■■□□□ 1.63
SS18L1-202ENST00000370848 KCNH8Q96L42 1107 aa25.23■■□□□ 1.63
SS18L1-202ENST00000370848 P3H3Q8IVL6 736 aa25.21■■□□□ 1.63
SS18L1-202ENST00000370848 NEO1Q92859 1461 aa25.18■■□□□ 1.62
SS18L1-202ENST00000370848 FHOD3Q2V2M9 1422 aa25.17■■□□□ 1.62
SS18L1-202ENST00000370848 FRMPD1Q5SYB0 1578 aa25.1■■□□□ 1.61
SS18L1-202ENST00000370848 ARID3CA6NKF2 412 aa25.08■■□□□ 1.61
SS18L1-202ENST00000370848 EHMT2Q96KQ7 1210 aa25.08■■□□□ 1.61
SS18L1-202ENST00000370848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.02■■□□□ 1.6
SS18L1-202ENST00000370848 CFAP74Q9C0B2 1584 aa25.02■■□□□ 1.6
SS18L1-202ENST00000370848 HECW2Q9P2P5 1572 aa25.01■■□□□ 1.59
SS18L1-202ENST00000370848 ADAMTSL3P82987 1691 aa25■■□□□ 1.59
SS18L1-202ENST00000370848 RICTORQ6R327 1708 aa25■■□□□ 1.59
SS18L1-202ENST00000370848 TTC37Q6PGP7 1564 aa24.98■■□□□ 1.59
SS18L1-202ENST00000370848 PLEKHD1A6NEE1 506 aa24.97■■□□□ 1.59
SS18L1-202ENST00000370848 ARHGEF40Q8TER5 1519 aa24.96■■□□□ 1.59
SS18L1-202ENST00000370848 ARHGAP35Q9NRY4 1499 aa24.96■■□□□ 1.59
SS18L1-202ENST00000370848 FMN1Q68DA7 1419 aa24.95■■□□□ 1.59
SS18L1-202ENST00000370848 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
SS18L1-202ENST00000370848 ZMYM4Q5VZL5 1548 aa24.95■■□□□ 1.58
SS18L1-202ENST00000370848 HECW1Q76N89 1606 aa24.94■■□□□ 1.58
SS18L1-202ENST00000370848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.94■■□□□ 1.58
SS18L1-202ENST00000370848 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
SS18L1-202ENST00000370848 CDK13Q14004 1512 aaKnown RBP24.94■■□□□ 1.58
SS18L1-202ENST00000370848 FANCAO15360 1455 aa24.94■■□□□ 1.58
SS18L1-202ENST00000370848 RAPGEF3O95398 923 aa24.93■■□□□ 1.58
SS18L1-202ENST00000370848 DENND4BO75064 1496 aaPredicted RBP24.92■■□□□ 1.58
SS18L1-202ENST00000370848 AKNAQ7Z591 1439 aa24.92■■□□□ 1.58
SS18L1-202ENST00000370848 BCORL1Q5H9F3 1711 aa24.92■■□□□ 1.58
SS18L1-202ENST00000370848 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
SS18L1-202ENST00000370848 PTPRMP28827 1452 aa24.86■■□□□ 1.57
SS18L1-202ENST00000370848 PLCH2O75038 1416 aa24.86■■□□□ 1.57
SS18L1-202ENST00000370848 MAGI2Q86UL8 1455 aa24.85■■□□□ 1.57
SS18L1-202ENST00000370848 MADDQ8WXG6 1647 aa24.81■■□□□ 1.56
SS18L1-202ENST00000370848 LRRIQ1Q96JM4 1722 aa24.81■■□□□ 1.56
SS18L1-202ENST00000370848 MYO5CQ9NQX4 1742 aa24.81■■□□□ 1.56
SS18L1-202ENST00000370848 POGZQ7Z3K3 1410 aa24.78■■□□□ 1.56
SS18L1-202ENST00000370848 ZFYVE16Q7Z3T8 1539 aa24.78■■□□□ 1.56
SS18L1-202ENST00000370848 KIF14Q15058 1648 aa24.77■■□□□ 1.56
SS18L1-202ENST00000370848 SIGLEC1Q9BZZ2 1709 aa24.77■■□□□ 1.56
SS18L1-202ENST00000370848 TROQ12816 1431 aaPredicted RBP24.77■■□□□ 1.56
SS18L1-202ENST00000370848 YEATS2Q9ULM3 1422 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms