RNA–Protein interactions for RNA: ENST00000370793.5

USP33-203, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 1 (best) BASIC

Gene USP33, Length 4,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-203ENST00000370793 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.43
USP33-203ENST00000370793 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
USP33-203ENST00000370793 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
USP33-203ENST00000370793 TIMELESSQ9UNS1 1208 aa17.74■□□□□ 0.43
USP33-203ENST00000370793 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
USP33-203ENST00000370793 SETD5Q9C0A6 1442 aa17.72■□□□□ 0.43
USP33-203ENST00000370793 TSPY4P0CV99 314 aa17.71■□□□□ 0.43
USP33-203ENST00000370793 TSPY10P0CW01 314 aa17.71■□□□□ 0.43
USP33-203ENST00000370793 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
USP33-203ENST00000370793 CADPSQ9ULU8 1353 aa17.67■□□□□ 0.42
USP33-203ENST00000370793 ARHGAP35Q9NRY4 1499 aa17.66■□□□□ 0.42
USP33-203ENST00000370793 RAB3GAP2Q9H2M9 1393 aa17.65■□□□□ 0.42
USP33-203ENST00000370793 TMC1Q8TDI8 760 aa17.62■□□□□ 0.41
USP33-203ENST00000370793 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
USP33-203ENST00000370793 CFDP1Q9UEE9 299 aaPredicted RBP17.59■□□□□ 0.41
USP33-203ENST00000370793 FMN1Q68DA7 1419 aa17.59■□□□□ 0.41
USP33-203ENST00000370793 DHX57Q6P158 1386 aaKnown RBP17.58■□□□□ 0.41
USP33-203ENST00000370793 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
USP33-203ENST00000370793 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
USP33-203ENST00000370793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.55■□□□□ 0.44e-13■□□□□ 11.1
USP33-203ENST00000370793 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
USP33-203ENST00000370793 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
USP33-203ENST00000370793 KIF21BO75037 1637 aa17.53■□□□□ 0.4
USP33-203ENST00000370793 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.4
USP33-203ENST00000370793 CCER2I3L3R5 266 aa17.52■□□□□ 0.39
USP33-203ENST00000370793 IRX6P78412 446 aaPredicted RBP17.52■□□□□ 0.39
USP33-203ENST00000370793 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.39
USP33-203ENST00000370793 FHOD3Q2V2M9 1422 aa17.51■□□□□ 0.39
USP33-203ENST00000370793 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
USP33-203ENST00000370793 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
USP33-203ENST00000370793 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
USP33-203ENST00000370793 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
USP33-203ENST00000370793 PPP1R15AO75807 674 aaPredicted RBP17.47■□□□□ 0.39
USP33-203ENST00000370793 SALL2Q9Y467 1007 aaPredicted RBP17.46■□□□□ 0.39
USP33-203ENST00000370793 IGF1RP08069 1367 aa17.46■□□□□ 0.38
USP33-203ENST00000370793 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
USP33-203ENST00000370793 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
USP33-203ENST00000370793 CARD11Q9BXL7 1154 aa17.4■□□□□ 0.38
USP33-203ENST00000370793 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
USP33-203ENST00000370793 CHGAP10645 457 aaKnown RBP17.39■□□□□ 0.37
USP33-203ENST00000370793 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
USP33-203ENST00000370793 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
USP33-203ENST00000370793 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
USP33-203ENST00000370793 RGL3Q3MIN7 710 aa17.37■□□□□ 0.37
USP33-203ENST00000370793 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
USP33-203ENST00000370793 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
USP33-203ENST00000370793 KCNH8Q96L42 1107 aa17.35■□□□□ 0.37
USP33-203ENST00000370793 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
USP33-203ENST00000370793 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
USP33-203ENST00000370793 NEFMP07197 916 aa17.34■□□□□ 0.37
USP33-203ENST00000370793 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
USP33-203ENST00000370793 CFTRP13569 1480 aa17.33■□□□□ 0.36
USP33-203ENST00000370793 ARAP1Q96P48 1450 aa17.33■□□□□ 0.36
USP33-203ENST00000370793 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.32■□□□□ 0.36
USP33-203ENST00000370793 PPP4R2Q9NY27 417 aa17.32■□□□□ 0.36
USP33-203ENST00000370793 FOXD1Q16676 465 aa17.3■□□□□ 0.36
USP33-203ENST00000370793 RRBP1Q9P2E9 1410 aaKnown RBP17.28■□□□□ 0.36
USP33-203ENST00000370793 ZBTB47Q9UFB7 747 aaPredicted RBP17.28■□□□□ 0.36
USP33-203ENST00000370793 CARMIL2Q6F5E8 1435 aa17.27■□□□□ 0.36
USP33-203ENST00000370793 LRRC9Q6ZRR7 1453 aa17.27■□□□□ 0.35
USP33-203ENST00000370793 PKD2Q13563 968 aa17.26■□□□□ 0.35
USP33-203ENST00000370793 ANP32EQ9BTT0 268 aa17.26■□□□□ 0.35
USP33-203ENST00000370793 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
USP33-203ENST00000370793 PHLDB1Q86UU1 1377 aa17.25■□□□□ 0.35
USP33-203ENST00000370793 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
USP33-203ENST00000370793 L3MBTL2Q969R5 705 aa17.25■□□□□ 0.35
USP33-203ENST00000370793 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
USP33-203ENST00000370793 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
USP33-203ENST00000370793 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
USP33-203ENST00000370793 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
USP33-203ENST00000370793 CUX1P39880 1505 aa17.22■□□□□ 0.35
USP33-203ENST00000370793 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
USP33-203ENST00000370793 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
USP33-203ENST00000370793 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.35
USP33-203ENST00000370793 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
USP33-203ENST00000370793 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
USP33-203ENST00000370793 ERICH6BQ5W0A0 696 aa17.18■□□□□ 0.34
USP33-203ENST00000370793 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
USP33-203ENST00000370793 CASKIN1Q8WXD9 1431 aa17.18■□□□□ 0.34
USP33-203ENST00000370793 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
USP33-203ENST00000370793 NUP155O75694 1391 aa17.17■□□□□ 0.34
USP33-203ENST00000370793 NBR1Q14596 966 aa17.16■□□□□ 0.34
USP33-203ENST00000370793 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
USP33-203ENST00000370793 MYOM3Q5VTT5 1437 aa17.15■□□□□ 0.34
USP33-203ENST00000370793 UPF2Q9HAU5 1272 aaKnown RBP17.15■□□□□ 0.34
USP33-203ENST00000370793 TSHZ2Q9NRE2 1034 aa17.13■□□□□ 0.33
USP33-203ENST00000370793 UACAQ9BZF9 1416 aa17.13■□□□□ 0.33
USP33-203ENST00000370793 TMF1P82094 1093 aa17.12■□□□□ 0.33
USP33-203ENST00000370793 FYCO1Q9BQS8 1478 aa17.12■□□□□ 0.33
USP33-203ENST00000370793 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
USP33-203ENST00000370793 ESF1Q9H501 851 aaKnown RBP17.11■□□□□ 0.33
USP33-203ENST00000370793 CC2D1BQ5T0F9 858 aaKnown RBP17.09■□□□□ 0.33
USP33-203ENST00000370793 JPH4Q96JJ6 628 aa17.08■□□□□ 0.32
USP33-203ENST00000370793 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
USP33-203ENST00000370793 TIAM1Q13009 1591 aa17.07■□□□□ 0.32
USP33-203ENST00000370793 BCL11AQ9H165 835 aa17.06■□□□□ 0.32
USP33-203ENST00000370793 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
USP33-203ENST00000370793 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
USP33-203ENST00000370793 RALBP1Q15311 655 aa17.05■□□□□ 0.32
USP33-203ENST00000370793 ROCK2O75116 1388 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms