RNA–Protein interactions for RNA: ENST00000370396.6

MTM1-203, Transcript of myotubularin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTM1, Length 3,593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTM1-203ENST00000370396 GRIN2BQ13224 1484 aa9.69□□□□□ -0.86
MTM1-203ENST00000370396 SPATA31D1Q6ZQQ2 1576 aa9.67□□□□□ -0.86
MTM1-203ENST00000370396 POLA1P09884 1462 aaPredicted RBP9.66□□□□□ -0.86
MTM1-203ENST00000370396 WIZO95785 1651 aa9.64□□□□□ -0.87
MTM1-203ENST00000370396 SHROOM2Q13796 1616 aa9.64□□□□□ -0.87
MTM1-203ENST00000370396 CEP170Q5SW79 1584 aa9.63□□□□□ -0.87
MTM1-203ENST00000370396 NPM1P06748 294 aaKnown RBP eCLIP9.63□□□□□ -0.87
MTM1-203ENST00000370396 SOGA1O94964 1423 aa9.61□□□□□ -0.87
MTM1-203ENST00000370396 TOP2AP11388 1531 aaKnown RBP9.61□□□□□ -0.87
MTM1-203ENST00000370396 ZBTB22O15209 634 aa9.6□□□□□ -0.87
MTM1-203ENST00000370396 TDRD9Q8NDG6 1382 aaKnown RBP9.6□□□□□ -0.87
MTM1-203ENST00000370396 PPP4R3CPQ6ZMV5 832 aa9.58□□□□□ -0.88
MTM1-203ENST00000370396 NUP160Q12769 1436 aa9.57□□□□□ -0.88
MTM1-203ENST00000370396 CERKQ8TCT0 537 aa9.55□□□□□ -0.88
MTM1-203ENST00000370396 GLI2P10070 1586 aa9.55□□□□□ -0.88
MTM1-203ENST00000370396 RAD54L2Q9Y4B4 1467 aa9.54□□□□□ -0.88
MTM1-203ENST00000370396 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
MTM1-203ENST00000370396 PBRM1Q86U86 1689 aa9.53□□□□□ -0.88
MTM1-203ENST00000370396 TSPOAP1O95153 1857 aa9.53□□□□□ -0.88
MTM1-203ENST00000370396 GRIN2AQ12879 1464 aa9.52□□□□□ -0.88
MTM1-203ENST00000370396 RTN4Q9NQC3 1192 aaKnown RBP9.5□□□□□ -0.89
MTM1-203ENST00000370396 TEX14Q8IWB6 1497 aa9.49□□□□□ -0.89
MTM1-203ENST00000370396 PPRC1Q5VV67 1664 aaKnown RBP9.49□□□□□ -0.89
MTM1-203ENST00000370396 PCF11O94913 1555 aaKnown RBP9.48□□□□□ -0.89
MTM1-203ENST00000370396 ADCY10Q96PN6 1610 aa9.47□□□□□ -0.89
MTM1-203ENST00000370396 FGD5Q6ZNL6 1462 aa9.46□□□□□ -0.89
MTM1-203ENST00000370396 NPM3O75607 178 aaKnown RBP9.46□□□□□ -0.9
MTM1-203ENST00000370396 PRG4Q92954 1404 aaPredicted RBP9.45□□□□□ -0.9
MTM1-203ENST00000370396 PLB1Q6P1J6 1458 aa9.44□□□□□ -0.9
MTM1-203ENST00000370396 KIAA0586Q9BVV6 1533 aa9.44□□□□□ -0.9
MTM1-203ENST00000370396 ABCA5Q8WWZ7 1642 aa9.43□□□□□ -0.9
MTM1-203ENST00000370396 ADAMTS12P58397 1594 aa9.42□□□□□ -0.9
MTM1-203ENST00000370396 CCDC88BA6NC98 1476 aa9.42□□□□□ -0.9
MTM1-203ENST00000370396 PTPRMP28827 1452 aa9.41□□□□□ -0.9
MTM1-203ENST00000370396 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
MTM1-203ENST00000370396 IQSEC2Q5JU85 1478 aa9.41□□□□□ -0.9
MTM1-203ENST00000370396 ABCA10Q8WWZ4 1543 aa9.4□□□□□ -0.91
MTM1-203ENST00000370396 FHAD1B1AJZ9 1412 aa9.39□□□□□ -0.91
MTM1-203ENST00000370396 ADAMTSL3P82987 1691 aa9.39□□□□□ -0.91
MTM1-203ENST00000370396 JPH4Q96JJ6 628 aa9.38□□□□□ -0.91
MTM1-203ENST00000370396 MAP3K4Q9Y6R4 1608 aa9.38□□□□□ -0.91
MTM1-203ENST00000370396 ABCC2Q92887 1545 aa9.33□□□□□ -0.92
MTM1-203ENST00000370396 PIAS4Q8N2W9 510 aaPredicted RBP9.33□□□□□ -0.92
MTM1-203ENST00000370396 ASXL2Q76L83 1435 aa9.32□□□□□ -0.92
MTM1-203ENST00000370396 DMRT2Q9Y5R5 561 aa9.32□□□□□ -0.92
MTM1-203ENST00000370396 CUX1P39880 1505 aa9.31□□□□□ -0.92
MTM1-203ENST00000370396 UHRF1BP1LA0JNW5 1464 aa9.3□□□□□ -0.92
MTM1-203ENST00000370396 EPRSP07814 1512 aaKnown RBP9.3□□□□□ -0.92
MTM1-203ENST00000370396 KIF21BO75037 1637 aa9.3□□□□□ -0.92
MTM1-203ENST00000370396 ERICH3Q5RHP9 1530 aa9.29□□□□□ -0.92
MTM1-203ENST00000370396 RUSC2Q8N2Y8 1516 aa9.29□□□□□ -0.92
MTM1-203ENST00000370396 NCBP3Q53F19 620 aaKnown RBP9.29□□□□□ -0.92
MTM1-203ENST00000370396 MAGI3Q5TCQ9 1506 aa9.28□□□□□ -0.92
MTM1-203ENST00000370396 BCORL1Q5H9F3 1711 aa9.26□□□□□ -0.93
MTM1-203ENST00000370396 PHLDB1Q86UU1 1377 aa9.23□□□□□ -0.93
MTM1-203ENST00000370396 ARAP3Q8WWN8 1544 aa9.23□□□□□ -0.93
MTM1-203ENST00000370396 PTPRGP23470 1445 aa9.23□□□□□ -0.93
MTM1-203ENST00000370396 PTPRTO14522 1441 aa9.23□□□□□ -0.93
MTM1-203ENST00000370396 YEATS2Q9ULM3 1422 aa9.22□□□□□ -0.93
MTM1-203ENST00000370396 CFAP43Q8NDM7 1665 aa9.21□□□□□ -0.93
MTM1-203ENST00000370396 MADDQ8WXG6 1647 aa9.21□□□□□ -0.93
MTM1-203ENST00000370396 MED1Q15648 1581 aaPredicted RBP9.2□□□□□ -0.94
MTM1-203ENST00000370396 CUL7Q14999 1698 aa9.2□□□□□ -0.94
MTM1-203ENST00000370396 KDM5BQ9UGL1 1544 aa9.2□□□□□ -0.94
MTM1-203ENST00000370396 TNIKQ9UKE5 1360 aa9.18□□□□□ -0.94
MTM1-203ENST00000370396 HSPA2P54652 639 aa9.18□□□□□ -0.94
MTM1-203ENST00000370396 WRNQ14191 1432 aaPredicted RBP eCLIP9.17□□□□□ -0.94
MTM1-203ENST00000370396 LTBP4Q8N2S1 1624 aa9.16□□□□□ -0.94
MTM1-203ENST00000370396 CARMIL2Q6F5E8 1435 aa9.16□□□□□ -0.94
MTM1-203ENST00000370396 RIMS1Q86UR5 1692 aaKnown RBP9.16□□□□□ -0.94
MTM1-203ENST00000370396 UACAQ9BZF9 1416 aa9.15□□□□□ -0.94
MTM1-203ENST00000370396 AMER1Q5JTC6 1135 aaPredicted RBP9.15□□□□□ -0.94
MTM1-203ENST00000370396 CD109Q6YHK3 1445 aa9.15□□□□□ -0.95
MTM1-203ENST00000370396 PREX1Q8TCU6 1659 aa9.14□□□□□ -0.95
MTM1-203ENST00000370396 WDR7Q9Y4E6 1490 aa9.14□□□□□ -0.95
MTM1-203ENST00000370396 POGZQ7Z3K3 1410 aa9.14□□□□□ -0.95
MTM1-203ENST00000370396 STRCQ7RTU9 1775 aa9.12□□□□□ -0.95
MTM1-203ENST00000370396 ZCCHC11Q5TAX3 1644 aaKnown RBP9.1□□□□□ -0.95
MTM1-203ENST00000370396 TTC37Q6PGP7 1564 aa9.09□□□□□ -0.95
MTM1-203ENST00000370396 FANCAO15360 1455 aa9.07□□□□□ -0.96
MTM1-203ENST00000370396 FOXD4L1Q9NU39 408 aa9.07□□□□□ -0.96
MTM1-203ENST00000370396 ARHGEF40Q8TER5 1519 aa9.06□□□□□ -0.96
MTM1-203ENST00000370396 ARID4BQ4LE39 1312 aaPredicted RBP9.06□□□□□ -0.96
MTM1-203ENST00000370396 NEO1Q92859 1461 aa9.05□□□□□ -0.96
MTM1-203ENST00000370396 UBAP1LF5GYI3 381 aa9.04□□□□□ -0.96
MTM1-203ENST00000370396 CNKSR2Q8WXI2 1034 aa9.04□□□□□ -0.96
MTM1-203ENST00000370396 SETD1BQ9UPS6 1966 aaKnown RBP9.04□□□□□ -0.96
MTM1-203ENST00000370396 BIVM-ERCC5R4GMW8 1640 aa9.03□□□□□ -0.96
MTM1-203ENST00000370396 UHRF1BP1Q6BDS2 1440 aa9.03□□□□□ -0.96
MTM1-203ENST00000370396 AKNAQ7Z591 1439 aa9.01□□□□□ -0.97
MTM1-203ENST00000370396 FER1L4A9Z1Z3 1794 aa9□□□□□ -0.97
MTM1-203ENST00000370396 MAPK8IP2Q13387 824 aaPredicted RBP8.99□□□□□ -0.97
MTM1-203ENST00000370396 FRMPD1Q5SYB0 1578 aa8.98□□□□□ -0.97
MTM1-203ENST00000370396 MAGI2Q86UL8 1455 aa8.97□□□□□ -0.97
MTM1-203ENST00000370396 HSPA1LP34931 641 aa8.97□□□□□ -0.97
MTM1-203ENST00000370396 ARHGEF12Q9NZN5 1544 aa8.97□□□□□ -0.97
MTM1-203ENST00000370396 NCOA1Q15788 1441 aa8.96□□□□□ -0.97
MTM1-203ENST00000370396 EFCAB5A4FU69 1503 aa8.96□□□□□ -0.98
MTM1-203ENST00000370396 ABCA9Q8IUA7 1624 aa8.95□□□□□ -0.98
MTM1-203ENST00000370396 ZMYM4Q5VZL5 1548 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms