RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 NESP48681 1621 aa25.38■■□□□ 1.65
RTCA-203ENST00000370128 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
RTCA-203ENST00000370128 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
RTCA-203ENST00000370128 TIAM1Q13009 1591 aa25.37■■□□□ 1.65
RTCA-203ENST00000370128 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
RTCA-203ENST00000370128 FHAD1B1AJZ9 1412 aa25.27■■□□□ 1.64
RTCA-203ENST00000370128 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
RTCA-203ENST00000370128 LAMC3Q9Y6N6 1575 aa25.23■■□□□ 1.63
RTCA-203ENST00000370128 TSHZ2Q9NRE2 1034 aa25.23■■□□□ 1.63
RTCA-203ENST00000370128 CUL7Q14999 1698 aa25.22■■□□□ 1.63
RTCA-203ENST00000370128 PCF11O94913 1555 aaKnown RBP25.22■■□□□ 1.63
RTCA-203ENST00000370128 MIER1Q8N108 512 aa25.21■■□□□ 1.63
RTCA-203ENST00000370128 ITGAEP38570 1179 aa25.21■■□□□ 1.63
RTCA-203ENST00000370128 P3H3Q8IVL6 736 aa25.2■■□□□ 1.62
RTCA-203ENST00000370128 YTHDC1Q96MU7 727 aaKnown RBP25.2■■□□□ 1.62
RTCA-203ENST00000370128 CFAP43Q8NDM7 1665 aa25.2■■□□□ 1.62
RTCA-203ENST00000370128 URB2Q14146 1524 aaKnown RBP25.19■■□□□ 1.62
RTCA-203ENST00000370128 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
RTCA-203ENST00000370128 EFCAB5A4FU69 1503 aa25.17■■□□□ 1.62
RTCA-203ENST00000370128 FHOD3Q2V2M9 1422 aa25.17■■□□□ 1.62
RTCA-203ENST00000370128 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
RTCA-203ENST00000370128 RAB3GAP2Q9H2M9 1393 aa25.13■■□□□ 1.61
RTCA-203ENST00000370128 CTTNBP2Q8WZ74 1663 aa25.13■■□□□ 1.61
RTCA-203ENST00000370128 FYCO1Q9BQS8 1478 aa25.12■■□□□ 1.61
RTCA-203ENST00000370128 CASKIN1Q8WXD9 1431 aa25.09■■□□□ 1.61
RTCA-203ENST00000370128 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.612e-11■■■■■ 27.9
RTCA-203ENST00000370128 ATP1B4Q9UN42 357 aaPredicted RBP25.07■■□□□ 1.6
RTCA-203ENST00000370128 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
RTCA-203ENST00000370128 SETD5Q9C0A6 1442 aa25.06■■□□□ 1.6
RTCA-203ENST00000370128 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
RTCA-203ENST00000370128 TDRD9Q8NDG6 1382 aaKnown RBP25.05■■□□□ 1.6
RTCA-203ENST00000370128 MAPKBP1O60336 1514 aa25.04■■□□□ 1.6
RTCA-203ENST00000370128 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
RTCA-203ENST00000370128 FAM50AQ14320 339 aaKnown RBP25.02■■□□□ 1.6
RTCA-203ENST00000370128 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
RTCA-203ENST00000370128 SUPT16HQ9Y5B9 1047 aaKnown RBP25.01■■□□□ 1.59
RTCA-203ENST00000370128 FMN1Q68DA7 1419 aa25■■□□□ 1.59
RTCA-203ENST00000370128 SNAPC4Q5SXM2 1469 aa24.98■■□□□ 1.59
RTCA-203ENST00000370128 KIF21AQ7Z4S6 1674 aa24.96■■□□□ 1.59
RTCA-203ENST00000370128 SAMD9Q5K651 1589 aa24.95■■□□□ 1.58
RTCA-203ENST00000370128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.93■■□□□ 1.58
RTCA-203ENST00000370128 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.57
RTCA-203ENST00000370128 FGD6Q6ZV73 1430 aa24.86■■□□□ 1.57
RTCA-203ENST00000370128 LRRIQ1Q96JM4 1722 aa24.84■■□□□ 1.57
RTCA-203ENST00000370128 MTUS2Q5JR59 1369 aa24.83■■□□□ 1.57
RTCA-203ENST00000370128 GRIN2BQ13224 1484 aa24.83■■□□□ 1.57
RTCA-203ENST00000370128 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
RTCA-203ENST00000370128 SIN3AQ96ST3 1273 aa24.79■■□□□ 1.56
RTCA-203ENST00000370128 ANO8Q9HCE9 1232 aaPredicted RBP24.78■■□□□ 1.56
RTCA-203ENST00000370128 NCOA2Q15596 1464 aa24.75■■□□□ 1.55
RTCA-203ENST00000370128 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
RTCA-203ENST00000370128 PTPRKQ15262 1439 aa24.72■■□□□ 1.55
RTCA-203ENST00000370128 MYOM3Q5VTT5 1437 aa24.71■■□□□ 1.55
RTCA-203ENST00000370128 TIMELESSQ9UNS1 1208 aa24.71■■□□□ 1.55
RTCA-203ENST00000370128 EHBP1L1Q8N3D4 1523 aa24.71■■□□□ 1.55
RTCA-203ENST00000370128 SUPT6HQ7KZ85 1726 aaKnown RBP24.7■■□□□ 1.54
RTCA-203ENST00000370128 HFM1A2PYH4 1435 aa24.69■■□□□ 1.54
RTCA-203ENST00000370128 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
RTCA-203ENST00000370128 CCDC18Q5T9S5 1454 aa24.67■■□□□ 1.54
RTCA-203ENST00000370128 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
RTCA-203ENST00000370128 MAGI3Q5TCQ9 1506 aa24.65■■□□□ 1.54
RTCA-203ENST00000370128 IQGAP2Q13576 1575 aa24.65■■□□□ 1.54
RTCA-203ENST00000370128 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
RTCA-203ENST00000370128 UGGT2Q9NYU1 1516 aa24.65■■□□□ 1.54
RTCA-203ENST00000370128 PTPN23Q9H3S7 1636 aa24.64■■□□□ 1.54
RTCA-203ENST00000370128 NAIPQ13075 1403 aa24.61■■□□□ 1.53
RTCA-203ENST00000370128 UACAQ9BZF9 1416 aa24.61■■□□□ 1.53
RTCA-203ENST00000370128 HECW1Q76N89 1606 aa24.6■■□□□ 1.53
RTCA-203ENST00000370128 PPP1R15AO75807 674 aaPredicted RBP24.6■■□□□ 1.53
RTCA-203ENST00000370128 EPRSP07814 1512 aaKnown RBP24.56■■□□□ 1.52
RTCA-203ENST00000370128 UBE2Q2Q8WVN8 375 aa24.55■■□□□ 1.52
RTCA-203ENST00000370128 TCOF1Q13428 1488 aaKnown RBP24.53■■□□□ 1.52
RTCA-203ENST00000370128 ZNF608Q9ULD9 1512 aaPredicted RBP24.52■■□□□ 1.52
RTCA-203ENST00000370128 IFT140Q96RY7 1462 aa24.52■■□□□ 1.52
RTCA-203ENST00000370128 WDR62O43379 1518 aa24.51■■□□□ 1.51
RTCA-203ENST00000370128 RBM19Q9Y4C8 960 aaKnown RBP24.51■■□□□ 1.51
RTCA-203ENST00000370128 CDK13Q14004 1512 aaKnown RBP24.5■■□□□ 1.51
RTCA-203ENST00000370128 DDX10Q13206 875 aaKnown RBP24.49■■□□□ 1.51
RTCA-203ENST00000370128 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
RTCA-203ENST00000370128 MYT1LQ9UL68 1186 aa24.49■■□□□ 1.51
RTCA-203ENST00000370128 KCNH8Q96L42 1107 aa24.45■■□□□ 1.5
RTCA-203ENST00000370128 MIA2Q96PC5 1412 aa24.43■■□□□ 1.5
RTCA-203ENST00000370128 KIAA0586Q9BVV6 1533 aa24.43■■□□□ 1.5
RTCA-203ENST00000370128 HIRIP3Q9BW71 556 aaPredicted RBP24.42■■□□□ 1.5
RTCA-203ENST00000370128 RRP7BPQ9NSQ0 103 aa24.42■■□□□ 1.5
RTCA-203ENST00000370128 GCC2Q8IWJ2 1684 aa24.42■■□□□ 1.5
RTCA-203ENST00000370128 MSH5O43196 834 aa24.41■■□□□ 1.5
RTCA-203ENST00000370128 CHIC2Q9UKJ5 165 aa24.41■■□□□ 1.5
RTCA-203ENST00000370128 AKNAQ7Z591 1439 aa24.41■■□□□ 1.5
RTCA-203ENST00000370128 DISP1Q96F81 1524 aa24.41■■□□□ 1.5
RTCA-203ENST00000370128 ARID3CA6NKF2 412 aa24.39■■□□□ 1.5
RTCA-203ENST00000370128 KIAA0556O60303 1618 aa24.39■■□□□ 1.5
RTCA-203ENST00000370128 SALL2Q9Y467 1007 aaPredicted RBP24.38■■□□□ 1.49
RTCA-203ENST00000370128 KDM5BQ9UGL1 1544 aa24.37■■□□□ 1.49
RTCA-203ENST00000370128 GRIN2AQ12879 1464 aa24.36■■□□□ 1.49
RTCA-203ENST00000370128 EIF4G3O43432 1585 aaKnown RBP24.36■■□□□ 1.49
RTCA-203ENST00000370128 DENND4BO75064 1496 aaPredicted RBP24.36■■□□□ 1.49
RTCA-203ENST00000370128 ERICH6BQ5W0A0 696 aa24.35■■□□□ 1.49
RTCA-203ENST00000370128 KDM6BO15054 1643 aa24.35■■□□□ 1.49
RTCA-203ENST00000370128 NUP153P49790 1475 aaKnown RBP24.33■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms