RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 IGF1RP08069 1367 aa12.33□□□□□ -0.44
CSDE1-204ENST00000369530 MAPKBP1O60336 1514 aa12.3□□□□□ -0.44
CSDE1-204ENST00000369530 KDM5BQ9UGL1 1544 aa12.29□□□□□ -0.44
CSDE1-204ENST00000369530 KIAA0556O60303 1618 aa12.29□□□□□ -0.44
CSDE1-204ENST00000369530 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
CSDE1-204ENST00000369530 ABCA8O94911 1581 aa12.26□□□□□ -0.45
CSDE1-204ENST00000369530 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
CSDE1-204ENST00000369530 TDRD9Q8NDG6 1382 aaKnown RBP12.25□□□□□ -0.45
CSDE1-204ENST00000369530 KIAA0586Q9BVV6 1533 aa12.24□□□□□ -0.45
CSDE1-204ENST00000369530 GLI2P10070 1586 aa12.24□□□□□ -0.45
CSDE1-204ENST00000369530 IQGAP2Q13576 1575 aa12.24□□□□□ -0.45
CSDE1-204ENST00000369530 DIP2BQ9P265 1576 aa12.21□□□□□ -0.46
CSDE1-204ENST00000369530 ZCCHC11Q5TAX3 1644 aaKnown RBP12.17□□□□□ -0.46
CSDE1-204ENST00000369530 ABCC2Q92887 1545 aa12.16□□□□□ -0.46
CSDE1-204ENST00000369530 KIF27Q86VH2 1401 aa12.14□□□□□ -0.47
CSDE1-204ENST00000369530 RAPGEF2Q9Y4G8 1499 aa12.11□□□□□ -0.47
CSDE1-204ENST00000369530 CFAP43Q8NDM7 1665 aa12.06□□□□□ -0.48
CSDE1-204ENST00000369530 EEA1Q15075 1411 aa12.05□□□□□ -0.48
CSDE1-204ENST00000369530 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
CSDE1-204ENST00000369530 ABCA9Q8IUA7 1624 aa12.05□□□□□ -0.48
CSDE1-204ENST00000369530 EFCAB5A4FU69 1503 aa12.03□□□□□ -0.48
CSDE1-204ENST00000369530 SIGLEC1Q9BZZ2 1709 aa12.03□□□□□ -0.48
CSDE1-204ENST00000369530 FRMPD1Q5SYB0 1578 aa12.03□□□□□ -0.48
CSDE1-204ENST00000369530 RAPGEF6Q8TEU7 1601 aa12□□□□□ -0.49
CSDE1-204ENST00000369530 ABCC10Q5T3U5 1492 aa11.98□□□□□ -0.49
CSDE1-204ENST00000369530 CARMIL1Q5VZK9 1371 aa11.98□□□□□ -0.49
CSDE1-204ENST00000369530 RICTORQ6R327 1708 aa11.97□□□□□ -0.49
CSDE1-204ENST00000369530 PRG4Q92954 1404 aaPredicted RBP11.96□□□□□ -0.5
CSDE1-204ENST00000369530 SUPT5HO00267 1087 aaKnown RBP11.93□□□□□ -0.5
CSDE1-204ENST00000369530 BCORL1Q5H9F3 1711 aa11.92□□□□□ -0.5
CSDE1-204ENST00000369530 ARAP3Q8WWN8 1544 aa11.92□□□□□ -0.5
CSDE1-204ENST00000369530 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
CSDE1-204ENST00000369530 NUP153P49790 1475 aaKnown RBP11.9□□□□□ -0.5
CSDE1-204ENST00000369530 EPRSP07814 1512 aaKnown RBP11.89□□□□□ -0.51
CSDE1-204ENST00000369530 MAGI3Q5TCQ9 1506 aa11.88□□□□□ -0.51
CSDE1-204ENST00000369530 ARHGAP35Q9NRY4 1499 aa11.88□□□□□ -0.51
CSDE1-204ENST00000369530 CDC42BPAQ5VT25 1732 aa11.87□□□□□ -0.51
CSDE1-204ENST00000369530 ZMYM4Q5VZL5 1548 aa11.85□□□□□ -0.51
CSDE1-204ENST00000369530 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
CSDE1-204ENST00000369530 TTC37Q6PGP7 1564 aa11.84□□□□□ -0.51
CSDE1-204ENST00000369530 TNIKQ9UKE5 1360 aa11.84□□□□□ -0.51
CSDE1-204ENST00000369530 GOLGA3Q08378 1498 aa11.83□□□□□ -0.52
CSDE1-204ENST00000369530 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
CSDE1-204ENST00000369530 REREQ9P2R6 1566 aa11.82□□□□□ -0.52
CSDE1-204ENST00000369530 PCF11O94913 1555 aaKnown RBP11.82□□□□□ -0.52
CSDE1-204ENST00000369530 UACAQ9BZF9 1416 aa11.82□□□□□ -0.52
CSDE1-204ENST00000369530 ATP10BO94823 1461 aa11.81□□□□□ -0.52
CSDE1-204ENST00000369530 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
CSDE1-204ENST00000369530 PLB1Q6P1J6 1458 aa11.8□□□□□ -0.52
CSDE1-204ENST00000369530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.8□□□□□ -0.52
CSDE1-204ENST00000369530 KDM5CP41229 1560 aa11.8□□□□□ -0.52
CSDE1-204ENST00000369530 HECW1Q76N89 1606 aa11.78□□□□□ -0.52
CSDE1-204ENST00000369530 MYO5CQ9NQX4 1742 aa11.78□□□□□ -0.52
CSDE1-204ENST00000369530 KIF14Q15058 1648 aa11.78□□□□□ -0.52
CSDE1-204ENST00000369530 ADAMTSL3P82987 1691 aa11.77□□□□□ -0.52
CSDE1-204ENST00000369530 JPH4Q96JJ6 628 aa11.77□□□□□ -0.53
CSDE1-204ENST00000369530 WDR7Q9Y4E6 1490 aa11.77□□□□□ -0.53
CSDE1-204ENST00000369530 CFAP74Q9C0B2 1584 aa11.77□□□□□ -0.53
CSDE1-204ENST00000369530 COL17A1Q9UMD9 1497 aaPredicted RBP11.76□□□□□ -0.53
CSDE1-204ENST00000369530 MAP3K1Q13233 1512 aa11.76□□□□□ -0.53
CSDE1-204ENST00000369530 CROCC2H7BZ55 1655 aa11.74□□□□□ -0.53
CSDE1-204ENST00000369530 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
CSDE1-204ENST00000369530 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
CSDE1-204ENST00000369530 ASXL2Q76L83 1435 aa11.73□□□□□ -0.53
CSDE1-204ENST00000369530 PLXNC1O60486 1568 aa11.72□□□□□ -0.53
CSDE1-204ENST00000369530 ADGBQ8N7X0 1667 aa11.7□□□□□ -0.54
CSDE1-204ENST00000369530 INO80Q9ULG1 1556 aaPredicted RBP11.7□□□□□ -0.54
CSDE1-204ENST00000369530 FYCO1Q9BQS8 1478 aa11.7□□□□□ -0.54
CSDE1-204ENST00000369530 TSPOAP1O95153 1857 aa11.69□□□□□ -0.54
CSDE1-204ENST00000369530 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
CSDE1-204ENST00000369530 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
CSDE1-204ENST00000369530 ARHGEF40Q8TER5 1519 aa11.67□□□□□ -0.54
CSDE1-204ENST00000369530 CASKIN1Q8WXD9 1431 aa11.66□□□□□ -0.54
CSDE1-204ENST00000369530 TIAM1Q13009 1591 aa11.66□□□□□ -0.54
CSDE1-204ENST00000369530 SAMD9LQ8IVG5 1584 aa11.65□□□□□ -0.54
CSDE1-204ENST00000369530 KDM6BO15054 1643 aa11.65□□□□□ -0.54
CSDE1-204ENST00000369530 PTPRGP23470 1445 aa11.64□□□□□ -0.55
CSDE1-204ENST00000369530 ABCC1P33527 1531 aa11.64□□□□□ -0.55
CSDE1-204ENST00000369530 MAST1Q9Y2H9 1570 aa11.64□□□□□ -0.55
CSDE1-204ENST00000369530 MYT1Q01538 1121 aa11.64□□□□□ -0.55
CSDE1-204ENST00000369530 MROH2AA6NES4 1674 aa11.63□□□□□ -0.55
CSDE1-204ENST00000369530 NEO1Q92859 1461 aa11.63□□□□□ -0.55
CSDE1-204ENST00000369530 ABCA6Q8N139 1617 aa11.62□□□□□ -0.55
CSDE1-204ENST00000369530 CDK13Q14004 1512 aaKnown RBP11.62□□□□□ -0.55
CSDE1-204ENST00000369530 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
CSDE1-204ENST00000369530 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
CSDE1-204ENST00000369530 ARHGEF12Q9NZN5 1544 aa11.59□□□□□ -0.55
CSDE1-204ENST00000369530 CCDC18Q5T9S5 1454 aa11.58□□□□□ -0.56
CSDE1-204ENST00000369530 MROH1Q8NDA8 1641 aa11.58□□□□□ -0.56
CSDE1-204ENST00000369530 DIP2CQ9Y2E4 1556 aa11.57□□□□□ -0.56
CSDE1-204ENST00000369530 FHOD3Q2V2M9 1422 aa11.57□□□□□ -0.56
CSDE1-204ENST00000369530 ARHGEF5Q12774 1597 aa11.57□□□□□ -0.56
CSDE1-204ENST00000369530 FER1L4A9Z1Z3 1794 aa11.56□□□□□ -0.56
CSDE1-204ENST00000369530 RNF17Q9BXT8 1623 aaKnown RBP11.56□□□□□ -0.56
CSDE1-204ENST00000369530 ZNF142P52746 1687 aaPredicted RBP11.54□□□□□ -0.56
CSDE1-204ENST00000369530 AGLP35573 1532 aa11.52□□□□□ -0.56
CSDE1-204ENST00000369530 FMN1Q68DA7 1419 aa11.51□□□□□ -0.57
CSDE1-204ENST00000369530 EHBP1L1Q8N3D4 1523 aa11.51□□□□□ -0.57
CSDE1-204ENST00000369530 EIF2AK4Q9P2K8 1649 aaKnown RBP11.51□□□□□ -0.57
CSDE1-204ENST00000369530 HECW2Q9P2P5 1572 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms