RNA–Protein interactions for RNA: ENST00000368640.8

LAMA4-204, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-204ENST00000368640 SNAPC4Q5SXM2 1469 aa19.28■□□□□ 0.68
LAMA4-204ENST00000368640 FHAD1B1AJZ9 1412 aa19.27■□□□□ 0.68
LAMA4-204ENST00000368640 IGF1RP08069 1367 aa19.26■□□□□ 0.67
LAMA4-204ENST00000368640 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
LAMA4-204ENST00000368640 CHMP7Q8WUX9 453 aaPredicted RBP19.24■□□□□ 0.67
LAMA4-204ENST00000368640 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
LAMA4-204ENST00000368640 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
LAMA4-204ENST00000368640 FAM9AQ8IZU1 332 aaPredicted RBP19.23■□□□□ 0.67
LAMA4-204ENST00000368640 RUSC2Q8N2Y8 1516 aa19.23■□□□□ 0.67
LAMA4-204ENST00000368640 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
LAMA4-204ENST00000368640 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
LAMA4-204ENST00000368640 KIF21BO75037 1637 aa19.15■□□□□ 0.66
LAMA4-204ENST00000368640 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
LAMA4-204ENST00000368640 PRXQ9BXM0 1461 aa19.14■□□□□ 0.65
LAMA4-204ENST00000368640 GOLGA3Q08378 1498 aa19.09■□□□□ 0.65
LAMA4-204ENST00000368640 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.64
LAMA4-204ENST00000368640 CTTNBP2Q8WZ74 1663 aa19.01■□□□□ 0.63
LAMA4-204ENST00000368640 NUP160Q12769 1436 aa19■□□□□ 0.63
LAMA4-204ENST00000368640 KIAA0586Q9BVV6 1533 aa18.98■□□□□ 0.63
LAMA4-204ENST00000368640 MAPK8IP2Q13387 824 aaPredicted RBP18.97■□□□□ 0.63
LAMA4-204ENST00000368640 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
LAMA4-204ENST00000368640 IQGAP2Q13576 1575 aa18.95■□□□□ 0.62
LAMA4-204ENST00000368640 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
LAMA4-204ENST00000368640 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.61
LAMA4-204ENST00000368640 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
LAMA4-204ENST00000368640 JPH4Q96JJ6 628 aa18.85■□□□□ 0.61
LAMA4-204ENST00000368640 DMRT2Q9Y5R5 561 aa18.84■□□□□ 0.61
LAMA4-204ENST00000368640 ERCC6L2Q5T890 1561 aa18.84■□□□□ 0.61
LAMA4-204ENST00000368640 SHROOM2Q13796 1616 aa18.82■□□□□ 0.6
LAMA4-204ENST00000368640 UGGT2Q9NYU1 1516 aa18.82■□□□□ 0.6
LAMA4-204ENST00000368640 EFCAB5A4FU69 1503 aa18.81■□□□□ 0.6
LAMA4-204ENST00000368640 LOC105371045A0A1W2PR82 267 aa18.78■□□□□ 0.6
LAMA4-204ENST00000368640 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
LAMA4-204ENST00000368640 FAM69CQ0P6D2 419 aa18.75■□□□□ 0.59
LAMA4-204ENST00000368640 ILDR1Q86SU0 546 aaPredicted RBP18.75■□□□□ 0.59
LAMA4-204ENST00000368640 RANGAP1P46060 587 aaPredicted RBP18.73■□□□□ 0.59
LAMA4-204ENST00000368640 KIAA0556O60303 1618 aa18.73■□□□□ 0.59
LAMA4-204ENST00000368640 CLIP1P30622 1438 aa18.73■□□□□ 0.59
LAMA4-204ENST00000368640 SAMD9Q5K651 1589 aa18.72■□□□□ 0.59
LAMA4-204ENST00000368640 CEP162Q5TB80 1403 aa18.71■□□□□ 0.59
LAMA4-204ENST00000368640 KDM4FA0A1W2PPD8 638 aa18.7■□□□□ 0.58
LAMA4-204ENST00000368640 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
LAMA4-204ENST00000368640 DISP1Q96F81 1524 aa18.68■□□□□ 0.58
LAMA4-204ENST00000368640 KIF13AQ9H1H9 1805 aa18.67■□□□□ 0.58
LAMA4-204ENST00000368640 FMN1Q68DA7 1419 aa18.65■□□□□ 0.58
LAMA4-204ENST00000368640 ABCC10Q5T3U5 1492 aa18.65■□□□□ 0.58
LAMA4-204ENST00000368640 PTPRGP23470 1445 aa18.64■□□□□ 0.57
LAMA4-204ENST00000368640 ARHGAP35Q9NRY4 1499 aa18.63■□□□□ 0.57
LAMA4-204ENST00000368640 P3H3Q8IVL6 736 aa18.61■□□□□ 0.57
LAMA4-204ENST00000368640 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
LAMA4-204ENST00000368640 FHOD3Q2V2M9 1422 aa18.58■□□□□ 0.57
LAMA4-204ENST00000368640 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
LAMA4-204ENST00000368640 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
LAMA4-204ENST00000368640 UACAQ9BZF9 1416 aa18.52■□□□□ 0.56
LAMA4-204ENST00000368640 KDM6BO15054 1643 aa18.51■□□□□ 0.55
LAMA4-204ENST00000368640 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
LAMA4-204ENST00000368640 RAPGEF6Q8TEU7 1601 aa18.5■□□□□ 0.55
LAMA4-204ENST00000368640 DIP2BQ9P265 1576 aa18.5■□□□□ 0.55
LAMA4-204ENST00000368640 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
LAMA4-204ENST00000368640 UHRF1BP1LA0JNW5 1464 aa18.48■□□□□ 0.55
LAMA4-204ENST00000368640 ABCC2Q92887 1545 aa18.48■□□□□ 0.55
LAMA4-204ENST00000368640 FYCO1Q9BQS8 1478 aa18.47■□□□□ 0.55
LAMA4-204ENST00000368640 APLP2Q06481 763 aa18.47■□□□□ 0.55
LAMA4-204ENST00000368640 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
LAMA4-204ENST00000368640 CASKIN1Q8WXD9 1431 aa18.46■□□□□ 0.55
LAMA4-204ENST00000368640 ABCA8O94911 1581 aa18.46■□□□□ 0.55
LAMA4-204ENST00000368640 PLB1Q6P1J6 1458 aa18.44■□□□□ 0.54
LAMA4-204ENST00000368640 CCDC18Q5T9S5 1454 aa18.43■□□□□ 0.54
LAMA4-204ENST00000368640 ADCY10Q96PN6 1610 aa18.42■□□□□ 0.54
LAMA4-204ENST00000368640 CDK11AQ9UQ88 783 aaPredicted RBP18.42■□□□□ 0.54
LAMA4-204ENST00000368640 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
LAMA4-204ENST00000368640 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
LAMA4-204ENST00000368640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.4■□□□□ 0.54
LAMA4-204ENST00000368640 HNRNPUL2Q1KMD3 747 aaKnown RBP18.4■□□□□ 0.54
LAMA4-204ENST00000368640 TSPOAP1O95153 1857 aa18.37■□□□□ 0.53
LAMA4-204ENST00000368640 KDM5BQ9UGL1 1544 aa18.36■□□□□ 0.53
LAMA4-204ENST00000368640 NUP153P49790 1475 aaKnown RBP18.35■□□□□ 0.53
LAMA4-204ENST00000368640 EPRSP07814 1512 aaKnown RBP18.34■□□□□ 0.53
LAMA4-204ENST00000368640 ADGRL1O94910 1474 aa18.34■□□□□ 0.53
LAMA4-204ENST00000368640 ZCCHC11Q5TAX3 1644 aaKnown RBP18.33■□□□□ 0.52
LAMA4-204ENST00000368640 PLEKHD1A6NEE1 506 aa18.32■□□□□ 0.52
LAMA4-204ENST00000368640 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
LAMA4-204ENST00000368640 ATP10BO94823 1461 aa18.29■□□□□ 0.52
LAMA4-204ENST00000368640 CFAP43Q8NDM7 1665 aa18.28■□□□□ 0.52
LAMA4-204ENST00000368640 TIAM1Q13009 1591 aa18.26■□□□□ 0.51
LAMA4-204ENST00000368640 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
LAMA4-204ENST00000368640 MTUS2Q5JR59 1369 aa18.26■□□□□ 0.51
LAMA4-204ENST00000368640 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
LAMA4-204ENST00000368640 CDK13Q14004 1512 aaKnown RBP18.25■□□□□ 0.51
LAMA4-204ENST00000368640 HECW2Q9P2P5 1572 aa18.24■□□□□ 0.51
LAMA4-204ENST00000368640 LRRIQ1Q96JM4 1722 aa18.23■□□□□ 0.51
LAMA4-204ENST00000368640 WDR7Q9Y4E6 1490 aa18.23■□□□□ 0.51
LAMA4-204ENST00000368640 EHBP1L1Q8N3D4 1523 aa18.23■□□□□ 0.51
LAMA4-204ENST00000368640 COL17A1Q9UMD9 1497 aaPredicted RBP18.21■□□□□ 0.51
LAMA4-204ENST00000368640 TROQ12816 1431 aaPredicted RBP18.21■□□□□ 0.51
LAMA4-204ENST00000368640 GLI2P10070 1586 aa18.21■□□□□ 0.51
LAMA4-204ENST00000368640 KIF14Q15058 1648 aa18.19■□□□□ 0.5
LAMA4-204ENST00000368640 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
LAMA4-204ENST00000368640 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
LAMA4-204ENST00000368640 SUPT6HQ7KZ85 1726 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms