RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 RUSC2Q8N2Y8 1516 aa30.63■■■□□ 2.49
C1orf43-204ENST00000368518 CUL7Q14999 1698 aa30.57■■■□□ 2.48
C1orf43-204ENST00000368518 KIAA0586Q9BVV6 1533 aa30.48■■■□□ 2.47
C1orf43-204ENST00000368518 CARMIL1Q5VZK9 1371 aa30.47■■■□□ 2.47
C1orf43-204ENST00000368518 NPM1P06748 294 aaKnown RBP eCLIP30.32■■■□□ 2.44
C1orf43-204ENST00000368518 TTBK1Q5TCY1 1321 aaPredicted RBP30.29■■■□□ 2.44
C1orf43-204ENST00000368518 ADCY10Q96PN6 1610 aa30.29■■■□□ 2.44
C1orf43-204ENST00000368518 KIF13AQ9H1H9 1805 aa30.26■■■□□ 2.44
C1orf43-204ENST00000368518 IQGAP2Q13576 1575 aa30.23■■■□□ 2.43
C1orf43-204ENST00000368518 PTPRGP23470 1445 aa30.21■■■□□ 2.43
C1orf43-204ENST00000368518 RAPGEF2Q9Y4G8 1499 aa30.19■■■□□ 2.42
C1orf43-204ENST00000368518 FAM69CQ0P6D2 419 aa30.19■■■□□ 2.42
C1orf43-204ENST00000368518 CARMIL2Q6F5E8 1435 aa30.19■■■□□ 2.42
C1orf43-204ENST00000368518 MAPKBP1O60336 1514 aa30.17■■■□□ 2.42
C1orf43-204ENST00000368518 ABCC10Q5T3U5 1492 aa30.15■■■□□ 2.42
C1orf43-204ENST00000368518 TNIKQ9UKE5 1360 aa30.15■■■□□ 2.42
C1orf43-204ENST00000368518 DIP2BQ9P265 1576 aa30.08■■■□□ 2.41
C1orf43-204ENST00000368518 DISP1Q96F81 1524 aa30.07■■■□□ 2.4
C1orf43-204ENST00000368518 UGGT2Q9NYU1 1516 aa30.01■■■□□ 2.4
C1orf43-204ENST00000368518 ABCC2Q92887 1545 aa30■■■□□ 2.39
C1orf43-204ENST00000368518 AEBP2Q6ZN18 517 aaPredicted RBP29.98■■■□□ 2.39
C1orf43-204ENST00000368518 UACAQ9BZF9 1416 aa29.96■■■□□ 2.39
C1orf43-204ENST00000368518 KIAA0556O60303 1618 aa29.95■■■□□ 2.38
C1orf43-204ENST00000368518 CTTNBP2Q8WZ74 1663 aa29.95■■■□□ 2.38
C1orf43-204ENST00000368518 TSPOAP1O95153 1857 aa29.94■■■□□ 2.38
C1orf43-204ENST00000368518 UHRF1BP1LA0JNW5 1464 aa29.93■■■□□ 2.38
C1orf43-204ENST00000368518 ASXL2Q76L83 1435 aa29.91■■■□□ 2.38
C1orf43-204ENST00000368518 PRXQ9BXM0 1461 aa29.9■■■□□ 2.38
C1orf43-204ENST00000368518 PLB1Q6P1J6 1458 aa29.86■■■□□ 2.37
C1orf43-204ENST00000368518 KDM6BO15054 1643 aa29.81■■■□□ 2.36
C1orf43-204ENST00000368518 KDM5BQ9UGL1 1544 aa29.81■■■□□ 2.36
C1orf43-204ENST00000368518 GOLGA3Q08378 1498 aa29.8■■■□□ 2.36
C1orf43-204ENST00000368518 ZCCHC11Q5TAX3 1644 aaKnown RBP29.79■■■□□ 2.36
C1orf43-204ENST00000368518 CSRNP3Q8WYN3 585 aa29.76■■■□□ 2.35
C1orf43-204ENST00000368518 GLI2P10070 1586 aa29.75■■■□□ 2.35
C1orf43-204ENST00000368518 EPRSP07814 1512 aaKnown RBP29.71■■■□□ 2.35
C1orf43-204ENST00000368518 P3H3Q8IVL6 736 aa29.69■■■□□ 2.34
C1orf43-204ENST00000368518 PPRC1Q5VV67 1664 aaKnown RBP29.69■■■□□ 2.34
C1orf43-204ENST00000368518 ABCA8O94911 1581 aa29.66■■■□□ 2.34
C1orf43-204ENST00000368518 FAM9AQ8IZU1 332 aaPredicted RBP29.65■■■□□ 2.34
C1orf43-204ENST00000368518 WDR7Q9Y4E6 1490 aa29.62■■■□□ 2.33
C1orf43-204ENST00000368518 MAP3K4Q9Y6R4 1608 aa29.62■■■□□ 2.33
C1orf43-204ENST00000368518 EEA1Q15075 1411 aa29.59■■■□□ 2.33
C1orf43-204ENST00000368518 ARID3CA6NKF2 412 aa29.58■■■□□ 2.33
C1orf43-204ENST00000368518 KCNH8Q96L42 1107 aa29.58■■■□□ 2.33
C1orf43-204ENST00000368518 RANGAP1P46060 587 aaPredicted RBP29.57■■■□□ 2.32
C1orf43-204ENST00000368518 TEX14Q8IWB6 1497 aa29.52■■■□□ 2.32
C1orf43-204ENST00000368518 SAMD9Q5K651 1589 aa29.51■■■□□ 2.31
C1orf43-204ENST00000368518 COL17A1Q9UMD9 1497 aaPredicted RBP29.5■■■□□ 2.31
C1orf43-204ENST00000368518 KDM4FA0A1W2PPD8 638 aa29.46■■■□□ 2.31
C1orf43-204ENST00000368518 CD109Q6YHK3 1445 aa29.45■■■□□ 2.3
C1orf43-204ENST00000368518 ATP10BO94823 1461 aa29.44■■■□□ 2.3
C1orf43-204ENST00000368518 CFAP43Q8NDM7 1665 aa29.42■■■□□ 2.3
C1orf43-204ENST00000368518 EHMT2Q96KQ7 1210 aa29.4■■■□□ 2.3
C1orf43-204ENST00000368518 RAPGEF6Q8TEU7 1601 aa29.39■■■□□ 2.3
C1orf43-204ENST00000368518 FHOD3Q2V2M9 1422 aa29.38■■■□□ 2.29
C1orf43-204ENST00000368518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.37■■■□□ 2.29
C1orf43-204ENST00000368518 HNRNPUL2Q1KMD3 747 aaKnown RBP29.37■■■□□ 2.29
C1orf43-204ENST00000368518 CHIC1Q5VXU3 224 aa29.37■■■□□ 2.29
C1orf43-204ENST00000368518 KIF21BO75037 1637 aa29.37■■■□□ 2.29
C1orf43-204ENST00000368518 MAGI3Q5TCQ9 1506 aa29.36■■■□□ 2.29
C1orf43-204ENST00000368518 NUP153P49790 1475 aaKnown RBP29.28■■■□□ 2.28
C1orf43-204ENST00000368518 ADGRL1O94910 1474 aa29.26■■■□□ 2.27
C1orf43-204ENST00000368518 UBTFP17480 764 aaKnown RBP29.26■■■□□ 2.27
C1orf43-204ENST00000368518 EFCAB5A4FU69 1503 aa29.23■■■□□ 2.27
C1orf43-204ENST00000368518 ABCA9Q8IUA7 1624 aa29.22■■■□□ 2.27
C1orf43-204ENST00000368518 PLEKHD1A6NEE1 506 aa29.14■■■□□ 2.26
C1orf43-204ENST00000368518 ARAP3Q8WWN8 1544 aa29.14■■■□□ 2.25
C1orf43-204ENST00000368518 ATP1B4Q9UN42 357 aaPredicted RBP29.08■■■□□ 2.25
C1orf43-204ENST00000368518 RAPGEF3O95398 923 aa29.07■■■□□ 2.24
C1orf43-204ENST00000368518 PHLDB1Q86UU1 1377 aa29.06■■■□□ 2.24
C1orf43-204ENST00000368518 CDK13Q14004 1512 aaKnown RBP29.05■■■□□ 2.24
C1orf43-204ENST00000368518 NEO1Q92859 1461 aa29.05■■■□□ 2.24
C1orf43-204ENST00000368518 ARHGAP35Q9NRY4 1499 aa29.04■■■□□ 2.24
C1orf43-204ENST00000368518 FMN1Q68DA7 1419 aa28.99■■■□□ 2.23
C1orf43-204ENST00000368518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.99■■■□□ 2.235e-8■■■□□ 14.8
C1orf43-204ENST00000368518 TTC37Q6PGP7 1564 aa28.96■■■□□ 2.23
C1orf43-204ENST00000368518 HECW1Q76N89 1606 aa28.94■■■□□ 2.22
C1orf43-204ENST00000368518 FRMPD1Q5SYB0 1578 aa28.94■■■□□ 2.22
C1orf43-204ENST00000368518 FANCAO15360 1455 aa28.92■■■□□ 2.22
C1orf43-204ENST00000368518 AKNAQ7Z591 1439 aa28.92■■■□□ 2.22
C1orf43-204ENST00000368518 CFAP74Q9C0B2 1584 aa28.88■■■□□ 2.21
C1orf43-204ENST00000368518 DENND4BO75064 1496 aaPredicted RBP28.88■■■□□ 2.21
C1orf43-204ENST00000368518 CDK11AQ9UQ88 783 aaPredicted RBP28.84■■■□□ 2.21
C1orf43-204ENST00000368518 RICTORQ6R327 1708 aa28.83■■■□□ 2.21
C1orf43-204ENST00000368518 ARID4BQ4LE39 1312 aaPredicted RBP28.83■■■□□ 2.21
C1orf43-204ENST00000368518 HECW2Q9P2P5 1572 aa28.8■■■□□ 2.2
C1orf43-204ENST00000368518 LRRIQ1Q96JM4 1722 aa28.8■■■□□ 2.2
C1orf43-204ENST00000368518 PLCH2O75038 1416 aa28.79■■■□□ 2.2
C1orf43-204ENST00000368518 KIF14Q15058 1648 aa28.78■■■□□ 2.2
C1orf43-204ENST00000368518 ARHGEF40Q8TER5 1519 aa28.77■■■□□ 2.2
C1orf43-204ENST00000368518 ADAMTSL3P82987 1691 aa28.75■■■□□ 2.19
C1orf43-204ENST00000368518 TROQ12816 1431 aaPredicted RBP28.75■■■□□ 2.19
C1orf43-204ENST00000368518 MYO5CQ9NQX4 1742 aa28.74■■■□□ 2.19
C1orf43-204ENST00000368518 SCAPERQ9BY12 1400 aa28.74■■■□□ 2.19
C1orf43-204ENST00000368518 BCORL1Q5H9F3 1711 aa28.72■■■□□ 2.19
C1orf43-204ENST00000368518 PCF11O94913 1555 aaKnown RBP28.72■■■□□ 2.19
C1orf43-204ENST00000368518 EFCAB2Q5VUJ9 269 aa28.72■■■□□ 2.19
C1orf43-204ENST00000368518 CLIP1P30622 1438 aa28.71■■■□□ 2.19
C1orf43-204ENST00000368518 CASKIN1Q8WXD9 1431 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms