RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 IGF1RP08069 1367 aa27.89■■■□□ 2.06
C1orf43-203ENST00000368516 PRG4Q92954 1404 aaPredicted RBP27.89■■■□□ 2.06
C1orf43-203ENST00000368516 JPH4Q96JJ6 628 aa27.88■■■□□ 2.05
C1orf43-203ENST00000368516 KIAA0586Q9BVV6 1533 aa27.78■■■□□ 2.04
C1orf43-203ENST00000368516 CARMIL1Q5VZK9 1371 aa27.73■■■□□ 2.03
C1orf43-203ENST00000368516 ADCY10Q96PN6 1610 aa27.58■■■□□ 2.01
C1orf43-203ENST00000368516 KIF13AQ9H1H9 1805 aa27.57■■■□□ 2
C1orf43-203ENST00000368516 IQGAP2Q13576 1575 aa27.56■■■□□ 2
C1orf43-203ENST00000368516 NPM1P06748 294 aaKnown RBP eCLIP27.55■■■□□ 2
C1orf43-203ENST00000368516 MAPKBP1O60336 1514 aa27.53■■■□□ 2
C1orf43-203ENST00000368516 CARMIL2Q6F5E8 1435 aa27.52■■■□□ 2
C1orf43-203ENST00000368516 RAPGEF2Q9Y4G8 1499 aa27.51■■■□□ 2
C1orf43-203ENST00000368516 PTPRGP23470 1445 aa27.48■■□□□ 1.99
C1orf43-203ENST00000368516 ABCC10Q5T3U5 1492 aa27.46■■□□□ 1.99
C1orf43-203ENST00000368516 TNIKQ9UKE5 1360 aa27.46■■□□□ 1.99
C1orf43-203ENST00000368516 DIP2BQ9P265 1576 aa27.41■■□□□ 1.98
C1orf43-203ENST00000368516 FAM69CQ0P6D2 419 aa27.4■■□□□ 1.98
C1orf43-203ENST00000368516 DISP1Q96F81 1524 aa27.38■■□□□ 1.97
C1orf43-203ENST00000368516 UGGT2Q9NYU1 1516 aa27.38■■□□□ 1.97
C1orf43-203ENST00000368516 TTBK1Q5TCY1 1321 aaPredicted RBP27.37■■□□□ 1.97
C1orf43-203ENST00000368516 CTTNBP2Q8WZ74 1663 aa27.33■■□□□ 1.97
C1orf43-203ENST00000368516 ABCC2Q92887 1545 aa27.33■■□□□ 1.97
C1orf43-203ENST00000368516 UHRF1BP1LA0JNW5 1464 aa27.32■■□□□ 1.96
C1orf43-203ENST00000368516 KIAA0556O60303 1618 aa27.3■■□□□ 1.96
C1orf43-203ENST00000368516 UACAQ9BZF9 1416 aa27.29■■□□□ 1.96
C1orf43-203ENST00000368516 PRXQ9BXM0 1461 aa27.26■■□□□ 1.95
C1orf43-203ENST00000368516 PLB1Q6P1J6 1458 aa27.22■■□□□ 1.95
C1orf43-203ENST00000368516 ASXL2Q76L83 1435 aa27.21■■□□□ 1.95
C1orf43-203ENST00000368516 TSPOAP1O95153 1857 aa27.21■■□□□ 1.95
C1orf43-203ENST00000368516 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
C1orf43-203ENST00000368516 KDM5BQ9UGL1 1544 aa27.17■■□□□ 1.94
C1orf43-203ENST00000368516 GLI2P10070 1586 aa27.15■■□□□ 1.94
C1orf43-203ENST00000368516 CHIC1Q5VXU3 224 aa27.15■■□□□ 1.94
C1orf43-203ENST00000368516 KDM6BO15054 1643 aa27.14■■□□□ 1.94
C1orf43-203ENST00000368516 ZCCHC11Q5TAX3 1644 aaKnown RBP27.14■■□□□ 1.94
C1orf43-203ENST00000368516 CSRNP3Q8WYN3 585 aa27.06■■□□□ 1.92
C1orf43-203ENST00000368516 EPRSP07814 1512 aaKnown RBP27.06■■□□□ 1.92
C1orf43-203ENST00000368516 EEA1Q15075 1411 aa27.05■■□□□ 1.92
C1orf43-203ENST00000368516 PPRC1Q5VV67 1664 aaKnown RBP27.05■■□□□ 1.92
C1orf43-203ENST00000368516 ABCA8O94911 1581 aa27.04■■□□□ 1.92
C1orf43-203ENST00000368516 MAP3K4Q9Y6R4 1608 aa27.01■■□□□ 1.91
C1orf43-203ENST00000368516 WDR7Q9Y4E6 1490 aa26.99■■□□□ 1.91
C1orf43-203ENST00000368516 FAM9AQ8IZU1 332 aaPredicted RBP26.95■■□□□ 1.9
C1orf43-203ENST00000368516 TEX14Q8IWB6 1497 aa26.93■■□□□ 1.9
C1orf43-203ENST00000368516 SAMD9Q5K651 1589 aa26.92■■□□□ 1.9
C1orf43-203ENST00000368516 P3H3Q8IVL6 736 aa26.87■■□□□ 1.89
C1orf43-203ENST00000368516 CFAP43Q8NDM7 1665 aa26.85■■□□□ 1.89
C1orf43-203ENST00000368516 KIF21BO75037 1637 aa26.82■■□□□ 1.88
C1orf43-203ENST00000368516 KCNH8Q96L42 1107 aa26.8■■□□□ 1.88
C1orf43-203ENST00000368516 RAPGEF6Q8TEU7 1601 aa26.79■■□□□ 1.88
C1orf43-203ENST00000368516 CD109Q6YHK3 1445 aa26.79■■□□□ 1.88
C1orf43-203ENST00000368516 COL17A1Q9UMD9 1497 aaPredicted RBP26.79■■□□□ 1.88
C1orf43-203ENST00000368516 MAGI3Q5TCQ9 1506 aa26.79■■□□□ 1.88
C1orf43-203ENST00000368516 ATP10BO94823 1461 aa26.78■■□□□ 1.88
C1orf43-203ENST00000368516 ARID3CA6NKF2 412 aa26.74■■□□□ 1.87
C1orf43-203ENST00000368516 KDM4FA0A1W2PPD8 638 aa26.71■■□□□ 1.87
C1orf43-203ENST00000368516 RANGAP1P46060 587 aaPredicted RBP26.71■■□□□ 1.87
C1orf43-203ENST00000368516 EFCAB5A4FU69 1503 aa26.7■■□□□ 1.87
C1orf43-203ENST00000368516 FHOD3Q2V2M9 1422 aa26.7■■□□□ 1.86
C1orf43-203ENST00000368516 ABCA9Q8IUA7 1624 aa26.66■■□□□ 1.86
C1orf43-203ENST00000368516 NUP153P49790 1475 aaKnown RBP26.66■■□□□ 1.86
C1orf43-203ENST00000368516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.62■■□□□ 1.85
C1orf43-203ENST00000368516 HNRNPUL2Q1KMD3 747 aaKnown RBP26.62■■□□□ 1.85
C1orf43-203ENST00000368516 ADGRL1O94910 1474 aa26.61■■□□□ 1.85
C1orf43-203ENST00000368516 ARAP3Q8WWN8 1544 aa26.57■■□□□ 1.84
C1orf43-203ENST00000368516 UBTFP17480 764 aaKnown RBP26.55■■□□□ 1.84
C1orf43-203ENST00000368516 PHLDB1Q86UU1 1377 aa26.55■■□□□ 1.84
C1orf43-203ENST00000368516 EHMT2Q96KQ7 1210 aa26.51■■□□□ 1.83
C1orf43-203ENST00000368516 NEO1Q92859 1461 aa26.5■■□□□ 1.83
C1orf43-203ENST00000368516 PLEKHD1A6NEE1 506 aa26.5■■□□□ 1.83
C1orf43-203ENST00000368516 FMN1Q68DA7 1419 aa26.45■■□□□ 1.82
C1orf43-203ENST00000368516 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
C1orf43-203ENST00000368516 HECW1Q76N89 1606 aa26.42■■□□□ 1.82
C1orf43-203ENST00000368516 CDK13Q14004 1512 aaKnown RBP26.41■■□□□ 1.82
C1orf43-203ENST00000368516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.39■■□□□ 1.825e-8■■■□□ 14.8
C1orf43-203ENST00000368516 CFAP74Q9C0B2 1584 aa26.39■■□□□ 1.82
C1orf43-203ENST00000368516 TTC37Q6PGP7 1564 aa26.37■■□□□ 1.81
C1orf43-203ENST00000368516 FRMPD1Q5SYB0 1578 aa26.36■■□□□ 1.81
C1orf43-203ENST00000368516 RAPGEF3O95398 923 aa26.35■■□□□ 1.81
C1orf43-203ENST00000368516 FANCAO15360 1455 aa26.34■■□□□ 1.81
C1orf43-203ENST00000368516 ATP1B4Q9UN42 357 aaPredicted RBP26.32■■□□□ 1.8
C1orf43-203ENST00000368516 AKNAQ7Z591 1439 aa26.31■■□□□ 1.8
C1orf43-203ENST00000368516 DENND4BO75064 1496 aaPredicted RBP26.3■■□□□ 1.8
C1orf43-203ENST00000368516 RICTORQ6R327 1708 aa26.29■■□□□ 1.8
C1orf43-203ENST00000368516 CDK11AQ9UQ88 783 aaPredicted RBP26.28■■□□□ 1.8
C1orf43-203ENST00000368516 ARHGEF40Q8TER5 1519 aa26.24■■□□□ 1.79
C1orf43-203ENST00000368516 PLCH2O75038 1416 aa26.23■■□□□ 1.79
C1orf43-203ENST00000368516 MYO5CQ9NQX4 1742 aa26.22■■□□□ 1.79
C1orf43-203ENST00000368516 KIF14Q15058 1648 aa26.22■■□□□ 1.79
C1orf43-203ENST00000368516 LRRIQ1Q96JM4 1722 aa26.22■■□□□ 1.79
C1orf43-203ENST00000368516 ZMYM4Q5VZL5 1548 aa26.2■■□□□ 1.79
C1orf43-203ENST00000368516 ADAMTSL3P82987 1691 aa26.2■■□□□ 1.78
C1orf43-203ENST00000368516 TROQ12816 1431 aaPredicted RBP26.2■■□□□ 1.78
C1orf43-203ENST00000368516 HECW2Q9P2P5 1572 aa26.2■■□□□ 1.78
C1orf43-203ENST00000368516 CLIP1P30622 1438 aa26.19■■□□□ 1.78
C1orf43-203ENST00000368516 BCORL1Q5H9F3 1711 aa26.17■■□□□ 1.78
C1orf43-203ENST00000368516 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
C1orf43-203ENST00000368516 CASKIN1Q8WXD9 1431 aa26.16■■□□□ 1.78
C1orf43-203ENST00000368516 CCDC18Q5T9S5 1454 aa26.15■■□□□ 1.78
C1orf43-203ENST00000368516 ARID4BQ4LE39 1312 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 278.7 ms