RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
SHC1-202ENST00000368445 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.841e-7■■■■■ 45.2
SHC1-202ENST00000368445 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
SHC1-202ENST00000368445 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
SHC1-202ENST00000368445 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
SHC1-202ENST00000368445 MTUS2Q5JR59 1369 aa20.24■□□□□ 0.83
SHC1-202ENST00000368445 NEUROD1Q13562 356 aa20.23■□□□□ 0.83
SHC1-202ENST00000368445 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
SHC1-202ENST00000368445 YTHDC1Q96MU7 727 aaKnown RBP20.2■□□□□ 0.82
SHC1-202ENST00000368445 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
SHC1-202ENST00000368445 PHLDB1Q86UU1 1377 aa20.16■□□□□ 0.82
SHC1-202ENST00000368445 FMN1Q68DA7 1419 aa20.13■□□□□ 0.81
SHC1-202ENST00000368445 LRRC9Q6ZRR7 1453 aa20.13■□□□□ 0.81
SHC1-202ENST00000368445 CHIC2Q9UKJ5 165 aa20.12■□□□□ 0.81
SHC1-202ENST00000368445 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
SHC1-202ENST00000368445 DHX57Q6P158 1386 aaKnown RBP20.1■□□□□ 0.81
SHC1-202ENST00000368445 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
SHC1-202ENST00000368445 RAB3GAP2Q9H2M9 1393 aa20.08■□□□□ 0.81
SHC1-202ENST00000368445 TIAM1Q13009 1591 aa20.08■□□□□ 0.8
SHC1-202ENST00000368445 ZNF608Q9ULD9 1512 aaPredicted RBP20.07■□□□□ 0.8
SHC1-202ENST00000368445 CUL7Q14999 1698 aa20.06■□□□□ 0.8
SHC1-202ENST00000368445 PCF11O94913 1555 aaKnown RBP20.05■□□□□ 0.8
SHC1-202ENST00000368445 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
SHC1-202ENST00000368445 CASKIN1Q8WXD9 1431 aa20.04■□□□□ 0.8
SHC1-202ENST00000368445 RRP7BPQ9NSQ0 103 aa20.02■□□□□ 0.8
SHC1-202ENST00000368445 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
SHC1-202ENST00000368445 GRIN2BQ13224 1484 aa20■□□□□ 0.79
SHC1-202ENST00000368445 SETD5Q9C0A6 1442 aa19.99■□□□□ 0.79
SHC1-202ENST00000368445 EFCAB5A4FU69 1503 aa19.98■□□□□ 0.79
SHC1-202ENST00000368445 MIER1Q8N108 512 aa19.98■□□□□ 0.79
SHC1-202ENST00000368445 FYCO1Q9BQS8 1478 aa19.97■□□□□ 0.79
SHC1-202ENST00000368445 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
SHC1-202ENST00000368445 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
SHC1-202ENST00000368445 CLSPNQ9HAW4 1339 aa19.96■□□□□ 0.79
SHC1-202ENST00000368445 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
SHC1-202ENST00000368445 IFT140Q96RY7 1462 aa19.94■□□□□ 0.78
SHC1-202ENST00000368445 CDK11AQ9UQ88 783 aaPredicted RBP19.92■□□□□ 0.78
SHC1-202ENST00000368445 TARBP1Q13395 1621 aaKnown RBP19.92■□□□□ 0.78
SHC1-202ENST00000368445 SNAPC4Q5SXM2 1469 aa19.91■□□□□ 0.78
SHC1-202ENST00000368445 HIRIP3Q9BW71 556 aaPredicted RBP19.9■□□□□ 0.78
SHC1-202ENST00000368445 CTTNBP2Q8WZ74 1663 aa19.9■□□□□ 0.78
SHC1-202ENST00000368445 MAP3K1Q13233 1512 aa19.89■□□□□ 0.77
SHC1-202ENST00000368445 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
SHC1-202ENST00000368445 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
SHC1-202ENST00000368445 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
SHC1-202ENST00000368445 NCOA2Q15596 1464 aa19.84■□□□□ 0.77
SHC1-202ENST00000368445 IQGAP2Q13576 1575 aa19.82■□□□□ 0.76
SHC1-202ENST00000368445 ACIN1Q9UKV3 1341 aaKnown RBP19.8■□□□□ 0.76
SHC1-202ENST00000368445 CDK13Q14004 1512 aaKnown RBP19.78■□□□□ 0.76
SHC1-202ENST00000368445 MYOM3Q5VTT5 1437 aa19.78■□□□□ 0.76
SHC1-202ENST00000368445 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
SHC1-202ENST00000368445 ZNF644Q9H582 1327 aaPredicted RBP19.77■□□□□ 0.76
SHC1-202ENST00000368445 CFDP1Q9UEE9 299 aaPredicted RBP19.77■□□□□ 0.76
SHC1-202ENST00000368445 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
SHC1-202ENST00000368445 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
SHC1-202ENST00000368445 TONSLQ96HA7 1378 aa19.76■□□□□ 0.75
SHC1-202ENST00000368445 WDR62O43379 1518 aa19.76■□□□□ 0.75
SHC1-202ENST00000368445 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
SHC1-202ENST00000368445 KIAA0586Q9BVV6 1533 aa19.75■□□□□ 0.75
SHC1-202ENST00000368445 PLEKHD1A6NEE1 506 aa19.75■□□□□ 0.75
SHC1-202ENST00000368445 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
SHC1-202ENST00000368445 FOXD1Q16676 465 aa19.74■□□□□ 0.75
SHC1-202ENST00000368445 CFAP43Q8NDM7 1665 aa19.73■□□□□ 0.75
SHC1-202ENST00000368445 EPRSP07814 1512 aaKnown RBP19.73■□□□□ 0.75
SHC1-202ENST00000368445 GTF3C3Q9Y5Q9 886 aa19.72■□□□□ 0.75
SHC1-202ENST00000368445 SAMD9Q5K651 1589 aa19.72■□□□□ 0.75
SHC1-202ENST00000368445 CARMIL2Q6F5E8 1435 aa19.71■□□□□ 0.75
SHC1-202ENST00000368445 PTPRKQ15262 1439 aa19.7■□□□□ 0.74
SHC1-202ENST00000368445 CCDC18Q5T9S5 1454 aa19.7■□□□□ 0.74
SHC1-202ENST00000368445 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
SHC1-202ENST00000368445 SYNJ2O15056 1496 aa19.65■□□□□ 0.74
SHC1-202ENST00000368445 EHBP1L1Q8N3D4 1523 aa19.65■□□□□ 0.74
SHC1-202ENST00000368445 KCNH8Q96L42 1107 aa19.65■□□□□ 0.74
SHC1-202ENST00000368445 PLB1Q6P1J6 1458 aa19.64■□□□□ 0.73
SHC1-202ENST00000368445 HECW1Q76N89 1606 aa19.64■□□□□ 0.73
SHC1-202ENST00000368445 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
SHC1-202ENST00000368445 PPP1R15AO75807 674 aaPredicted RBP19.63■□□□□ 0.73
SHC1-202ENST00000368445 SLC4A1APQ9BWU0 796 aaKnown RBP19.63■□□□□ 0.73
SHC1-202ENST00000368445 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
SHC1-202ENST00000368445 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
SHC1-202ENST00000368445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.62■□□□□ 0.73
SHC1-202ENST00000368445 MAGI3Q5TCQ9 1506 aa19.62■□□□□ 0.73
SHC1-202ENST00000368445 THOC2Q8NI27 1593 aaKnown RBP19.61■□□□□ 0.73
SHC1-202ENST00000368445 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
SHC1-202ENST00000368445 MAPKBP1O60336 1514 aa19.6■□□□□ 0.73
SHC1-202ENST00000368445 MPHOSPH9Q99550 1183 aa19.6■□□□□ 0.73
SHC1-202ENST00000368445 DISP1Q96F81 1524 aa19.6■□□□□ 0.73
SHC1-202ENST00000368445 NAIPQ13075 1403 aa19.59■□□□□ 0.73
SHC1-202ENST00000368445 UGGT2Q9NYU1 1516 aa19.59■□□□□ 0.73
SHC1-202ENST00000368445 HFM1A2PYH4 1435 aa19.58■□□□□ 0.73
SHC1-202ENST00000368445 TSPY4P0CV99 314 aa19.56■□□□□ 0.72
SHC1-202ENST00000368445 TSPY10P0CW01 314 aa19.56■□□□□ 0.72
SHC1-202ENST00000368445 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
SHC1-202ENST00000368445 PTPRGP23470 1445 aa19.55■□□□□ 0.72
SHC1-202ENST00000368445 NUP153P49790 1475 aaKnown RBP19.55■□□□□ 0.72
SHC1-202ENST00000368445 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
SHC1-202ENST00000368445 UACAQ9BZF9 1416 aa19.55■□□□□ 0.72
SHC1-202ENST00000368445 TIMELESSQ9UNS1 1208 aa19.54■□□□□ 0.72
SHC1-202ENST00000368445 POLR3GLQ9BT43 218 aa19.53■□□□□ 0.72
SHC1-202ENST00000368445 KIAA0556O60303 1618 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms