RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 ZEB1P37275 1124 aaPredicted RBP41.59■■■■■ 4.25
EFNA1-202ENST00000368407 GRIN2AQ12879 1464 aa41.58■■■■■ 4.25
EFNA1-202ENST00000368407 CHD1O14646 1710 aa41.45■■■■■ 4.23
EFNA1-202ENST00000368407 TNIKQ9UKE5 1360 aa41.41■■■■■ 4.22
EFNA1-202ENST00000368407 CEP170Q5SW79 1584 aa41.34■■■■■ 4.21
EFNA1-202ENST00000368407 NUP160Q12769 1436 aa41.33■■■■■ 4.21
EFNA1-202ENST00000368407 CTTNBP2Q8WZ74 1663 aa41.25■■■■■ 4.19
EFNA1-202ENST00000368407 RANGAP1P46060 587 aaPredicted RBP41.24■■■■■ 4.19
EFNA1-202ENST00000368407 KIAA0586Q9BVV6 1533 aa41.21■■■■■ 4.19
EFNA1-202ENST00000368407 CEP162Q5TB80 1403 aa41.14■■■■■ 4.18
EFNA1-202ENST00000368407 IQGAP2Q13576 1575 aa41.14■■■■■ 4.18
EFNA1-202ENST00000368407 OSCARQ8IYS5 282 aa41.08■■■■■ 4.17
EFNA1-202ENST00000368407 CLIP1P30622 1438 aa41.03■■■■■ 4.16
EFNA1-202ENST00000368407 CLASP1Q7Z460 1538 aa41.03■■■■■ 4.16
EFNA1-202ENST00000368407 JPH4Q96JJ6 628 aa40.99■■■■■ 4.15
EFNA1-202ENST00000368407 UGGT2Q9NYU1 1516 aa40.94■■■■■ 4.14
EFNA1-202ENST00000368407 ARHGAP35Q9NRY4 1499 aa40.92■■■■■ 4.14
EFNA1-202ENST00000368407 P3H3Q8IVL6 736 aa40.89■■■■■ 4.14
EFNA1-202ENST00000368407 SHROOM2Q13796 1616 aa40.83■■■■■ 4.13
EFNA1-202ENST00000368407 SAMD9Q5K651 1589 aa40.83■■■■■ 4.13
EFNA1-202ENST00000368407 DISP1Q96F81 1524 aa40.83■■■■■ 4.13
EFNA1-202ENST00000368407 EFCAB5A4FU69 1503 aa40.82■■■■■ 4.12
EFNA1-202ENST00000368407 PRG4Q92954 1404 aaPredicted RBP40.8■■■■■ 4.12
EFNA1-202ENST00000368407 ARAP1Q96P48 1450 aa40.79■■■■■ 4.12
EFNA1-202ENST00000368407 FHOD3Q2V2M9 1422 aa40.77■■■■■ 4.12
EFNA1-202ENST00000368407 KIAA0556O60303 1618 aa40.74■■■■■ 4.11
EFNA1-202ENST00000368407 CARMIL2Q6F5E8 1435 aa40.71■■■■■ 4.11
EFNA1-202ENST00000368407 ERCC6L2Q5T890 1561 aa40.7■■■■■ 4.11
EFNA1-202ENST00000368407 TTBK1Q5TCY1 1321 aaPredicted RBP40.61■■■■■ 4.09
EFNA1-202ENST00000368407 PELP1Q8IZL8 1130 aaKnown RBP40.56■■■■■ 4.08
EFNA1-202ENST00000368407 VPS8Q8N3P4 1428 aa40.53■■■■■ 4.08
EFNA1-202ENST00000368407 FMN1Q68DA7 1419 aa40.47■■■■■ 4.07
EFNA1-202ENST00000368407 PTPRGP23470 1445 aa40.44■■■■■ 4.06
EFNA1-202ENST00000368407 ARHGEF11O15085 1522 aa40.41■■■■■ 4.06
EFNA1-202ENST00000368407 PCF11O94913 1555 aaKnown RBP40.34■■■■■ 4.05
EFNA1-202ENST00000368407 PLB1Q6P1J6 1458 aa40.33■■■■■ 4.05
EFNA1-202ENST00000368407 CASKIN1Q8WXD9 1431 aa40.3■■■■■ 4.04
EFNA1-202ENST00000368407 ATP1B4Q9UN42 357 aaPredicted RBP40.3■■■■■ 4.04
EFNA1-202ENST00000368407 RIMBP3CA6NJZ7 1639 aa40.27■■■■■ 4.04
EFNA1-202ENST00000368407 RIMBP3BA6NNM3 1639 aa40.27■■■■■ 4.04
EFNA1-202ENST00000368407 RIMBP3Q9UFD9 1639 aa40.27■■■■■ 4.04
EFNA1-202ENST00000368407 FYCO1Q9BQS8 1478 aa40.24■■■■■ 4.03
EFNA1-202ENST00000368407 ABCA8O94911 1581 aa40.22■■■■■ 4.03
EFNA1-202ENST00000368407 RAPGEF6Q8TEU7 1601 aa40.21■■■■■ 4.03
EFNA1-202ENST00000368407 UACAQ9BZF9 1416 aa40.19■■■■■ 4.02
EFNA1-202ENST00000368407 ARID3CA6NKF2 412 aa40.16■■■■■ 4.02
EFNA1-202ENST00000368407 NUP153P49790 1475 aaKnown RBP40.15■■■■■ 4.02
EFNA1-202ENST00000368407 HECW1Q76N89 1606 aa40.13■■■■■ 4.01
EFNA1-202ENST00000368407 CYB5RLQ6IPT4 315 aa40.08■■■■■ 4.01
EFNA1-202ENST00000368407 ABCC2Q92887 1545 aa40.08■■■■■ 4.01
EFNA1-202ENST00000368407 APLP2Q06481 763 aa40.06■■■■■ 4
EFNA1-202ENST00000368407 LRRIQ1Q96JM4 1722 aa40.06■■■■■ 4
EFNA1-202ENST00000368407 EPRSP07814 1512 aaKnown RBP40.05■■■■■ 4
EFNA1-202ENST00000368407 SCAF1Q9H7N4 1312 aaKnown RBP40.04■■■■■ 4
EFNA1-202ENST00000368407 CDK13Q14004 1512 aaKnown RBP40.03■■■■■ 4
EFNA1-202ENST00000368407 UHRF1BP1LA0JNW5 1464 aa40.03■■■■■ 4
EFNA1-202ENST00000368407 DNAJC5Q9H3Z4 198 aa40.01■■■■□ 3.99
EFNA1-202ENST00000368407 ADCY10Q96PN6 1610 aa40■■■■□ 3.99
EFNA1-202ENST00000368407 TIAM1Q13009 1591 aa39.97■■■■□ 3.99
EFNA1-202ENST00000368407 CCDC18Q5T9S5 1454 aa39.97■■■■□ 3.99
EFNA1-202ENST00000368407 ATP10BO94823 1461 aa39.96■■■■□ 3.99
EFNA1-202ENST00000368407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.94■■■■□ 3.98
EFNA1-202ENST00000368407 HNRNPUL2Q1KMD3 747 aaKnown RBP39.94■■■■□ 3.98
EFNA1-202ENST00000368407 KANK4Q5T7N3 995 aaPredicted RBP39.93■■■■□ 3.98
EFNA1-202ENST00000368407 MAP3K1Q13233 1512 aa39.93■■■■□ 3.98
EFNA1-202ENST00000368407 CFAP43Q8NDM7 1665 aa39.91■■■■□ 3.98
EFNA1-202ENST00000368407 KDM5BQ9UGL1 1544 aa39.87■■■■□ 3.97
EFNA1-202ENST00000368407 CCER1Q8TC90 406 aaPredicted RBP39.86■■■■□ 3.97
EFNA1-202ENST00000368407 LRRC9Q6ZRR7 1453 aa39.81■■■■□ 3.96
EFNA1-202ENST00000368407 MAGI3Q5TCQ9 1506 aa39.8■■■■□ 3.96
EFNA1-202ENST00000368407 ZCCHC11Q5TAX3 1644 aaKnown RBP39.8■■■■□ 3.96
EFNA1-202ENST00000368407 MTUS2Q5JR59 1369 aa39.76■■■■□ 3.95
EFNA1-202ENST00000368407 CDK11AQ9UQ88 783 aaPredicted RBP39.74■■■■□ 3.95
EFNA1-202ENST00000368407 NPM1P06748 294 aaKnown RBP eCLIP39.71■■■■□ 3.95
EFNA1-202ENST00000368407 PLEKHD1A6NEE1 506 aa39.7■■■■□ 3.95
EFNA1-202ENST00000368407 ACIN1Q9UKV3 1341 aaKnown RBP39.67■■■■□ 3.94
EFNA1-202ENST00000368407 EHBP1L1Q8N3D4 1523 aa39.65■■■■□ 3.94
EFNA1-202ENST00000368407 TROQ12816 1431 aaPredicted RBP39.65■■■■□ 3.94
EFNA1-202ENST00000368407 ASXL2Q76L83 1435 aa39.58■■■■□ 3.93
EFNA1-202ENST00000368407 WDR7Q9Y4E6 1490 aa39.53■■■■□ 3.92
EFNA1-202ENST00000368407 KCNH8Q96L42 1107 aa39.52■■■■□ 3.92
EFNA1-202ENST00000368407 NCOA2Q15596 1464 aa39.5■■■■□ 3.91
EFNA1-202ENST00000368407 KIF14Q15058 1648 aa39.5■■■■□ 3.91
EFNA1-202ENST00000368407 DIEXFQ68CQ4 756 aaKnown RBP39.5■■■■□ 3.91
EFNA1-202ENST00000368407 SUPT6HQ7KZ85 1726 aaKnown RBP39.48■■■■□ 3.91
EFNA1-202ENST00000368407 CENPBP07199 599 aaPredicted RBP39.47■■■■□ 3.91
EFNA1-202ENST00000368407 MAPKBP1O60336 1514 aa39.46■■■■□ 3.91
EFNA1-202ENST00000368407 PHLDB1Q86UU1 1377 aa39.44■■■■□ 3.9
EFNA1-202ENST00000368407 ABCC10Q5T3U5 1492 aa39.36■■■■□ 3.89
EFNA1-202ENST00000368407 NEUROD1Q13562 356 aa39.34■■■■□ 3.89
EFNA1-202ENST00000368407 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.34■■■■□ 3.89
EFNA1-202ENST00000368407 CCNB3Q8WWL7 1395 aa39.31■■■■□ 3.88
EFNA1-202ENST00000368407 TTC37Q6PGP7 1564 aa39.3■■■■□ 3.88
EFNA1-202ENST00000368407 MYOM3Q5VTT5 1437 aa39.27■■■■□ 3.88
EFNA1-202ENST00000368407 GPATCH8Q9UKJ3 1502 aaKnown RBP39.25■■■■□ 3.87
EFNA1-202ENST00000368407 ZNF316A6NFI3 1004 aaPredicted RBP39.18■■■■□ 3.86
EFNA1-202ENST00000368407 FGD6Q6ZV73 1430 aa39.18■■■■□ 3.86
EFNA1-202ENST00000368407 ABCA9Q8IUA7 1624 aa39.18■■■■□ 3.86
EFNA1-202ENST00000368407 RRBP1Q9P2E9 1410 aaKnown RBP39.16■■■■□ 3.86
EFNA1-202ENST00000368407 CDC42BPAQ5VT25 1732 aa39.16■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms