RNA–Protein interactions for RNA: ENST00000368393.7

MUC1-208, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-208ENST00000368393 SHROOM2Q13796 1616 aa21.96■■□□□ 1.11
MUC1-208ENST00000368393 FAM9AQ8IZU1 332 aaPredicted RBP21.95■■□□□ 1.1
MUC1-208ENST00000368393 RIMBP3CA6NJZ7 1639 aa21.93■■□□□ 1.1
MUC1-208ENST00000368393 RIMBP3BA6NNM3 1639 aa21.93■■□□□ 1.1
MUC1-208ENST00000368393 JPH4Q96JJ6 628 aa21.93■■□□□ 1.1
MUC1-208ENST00000368393 RIMBP3Q9UFD9 1639 aa21.93■■□□□ 1.1
MUC1-208ENST00000368393 ERCC6L2Q5T890 1561 aa21.92■■□□□ 1.1
MUC1-208ENST00000368393 ARAP1Q96P48 1450 aa21.88■■□□□ 1.09
MUC1-208ENST00000368393 KIF21BO75037 1637 aa21.84■■□□□ 1.09
MUC1-208ENST00000368393 PRG4Q92954 1404 aaPredicted RBP21.84■■□□□ 1.09
MUC1-208ENST00000368393 IQGAP2Q13576 1575 aa21.8■■□□□ 1.08
MUC1-208ENST00000368393 UGGT2Q9NYU1 1516 aa21.8■■□□□ 1.08
MUC1-208ENST00000368393 DISP1Q96F81 1524 aa21.78■■□□□ 1.08
MUC1-208ENST00000368393 CYB5RLQ6IPT4 315 aa21.74■■□□□ 1.07
MUC1-208ENST00000368393 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
MUC1-208ENST00000368393 CTTNBP2Q8WZ74 1663 aa21.69■■□□□ 1.06
MUC1-208ENST00000368393 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
MUC1-208ENST00000368393 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
MUC1-208ENST00000368393 KIAA0556O60303 1618 aa21.62■■□□□ 1.05
MUC1-208ENST00000368393 EHMT2Q96KQ7 1210 aa21.6■■□□□ 1.05
MUC1-208ENST00000368393 PTPRGP23470 1445 aa21.59■■□□□ 1.05
MUC1-208ENST00000368393 SAMD9Q5K651 1589 aa21.59■■□□□ 1.05
MUC1-208ENST00000368393 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
MUC1-208ENST00000368393 LOC105371045A0A1W2PR82 267 aa21.51■■□□□ 1.03
MUC1-208ENST00000368393 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
MUC1-208ENST00000368393 ADCY10Q96PN6 1610 aa21.49■■□□□ 1.03
MUC1-208ENST00000368393 P3H3Q8IVL6 736 aa21.49■■□□□ 1.03
MUC1-208ENST00000368393 UHRF1BP1LA0JNW5 1464 aa21.49■■□□□ 1.03
MUC1-208ENST00000368393 FHOD3Q2V2M9 1422 aa21.46■■□□□ 1.03
MUC1-208ENST00000368393 UACAQ9BZF9 1416 aa21.46■■□□□ 1.03
MUC1-208ENST00000368393 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.03
MUC1-208ENST00000368393 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
MUC1-208ENST00000368393 ABCA8O94911 1581 aa21.44■■□□□ 1.02
MUC1-208ENST00000368393 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
MUC1-208ENST00000368393 ABCC2Q92887 1545 aa21.41■■□□□ 1.02
MUC1-208ENST00000368393 TTBK1Q5TCY1 1321 aaPredicted RBP21.41■■□□□ 1.02
MUC1-208ENST00000368393 KDM5BQ9UGL1 1544 aa21.39■■□□□ 1.01
MUC1-208ENST00000368393 CLIP1P30622 1438 aa21.34■■□□□ 1.01
MUC1-208ENST00000368393 MAPKBP1O60336 1514 aa21.33■■□□□ 1
MUC1-208ENST00000368393 NUP153P49790 1475 aaKnown RBP21.31■■□□□ 1
MUC1-208ENST00000368393 CEP162Q5TB80 1403 aa21.3■■□□□ 1
MUC1-208ENST00000368393 ATP10BO94823 1461 aa21.3■■□□□ 1
MUC1-208ENST00000368393 RAPGEF6Q8TEU7 1601 aa21.26■□□□□ 0.99
MUC1-208ENST00000368393 FMN1Q68DA7 1419 aa21.25■□□□□ 0.99
MUC1-208ENST00000368393 ASXL2Q76L83 1435 aa21.24■□□□□ 0.99
MUC1-208ENST00000368393 ZCCHC11Q5TAX3 1644 aaKnown RBP21.23■□□□□ 0.99
MUC1-208ENST00000368393 NPM1P06748 294 aaKnown RBP eCLIP21.23■□□□□ 0.99
MUC1-208ENST00000368393 ABCC10Q5T3U5 1492 aa21.22■□□□□ 0.99
MUC1-208ENST00000368393 CASKIN1Q8WXD9 1431 aa21.19■□□□□ 0.98
MUC1-208ENST00000368393 ARID3CA6NKF2 412 aa21.16■□□□□ 0.98
MUC1-208ENST00000368393 DIP2BQ9P265 1576 aa21.14■□□□□ 0.98
MUC1-208ENST00000368393 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.98
MUC1-208ENST00000368393 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
MUC1-208ENST00000368393 PCF11O94913 1555 aaKnown RBP21.12■□□□□ 0.97
MUC1-208ENST00000368393 CDK13Q14004 1512 aaKnown RBP21.12■□□□□ 0.97
MUC1-208ENST00000368393 GLI2P10070 1586 aa21.1■□□□□ 0.97
MUC1-208ENST00000368393 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
MUC1-208ENST00000368393 FAM69CQ0P6D2 419 aa21.1■□□□□ 0.97
MUC1-208ENST00000368393 KIF13AQ9H1H9 1805 aa21.09■□□□□ 0.97
MUC1-208ENST00000368393 FYCO1Q9BQS8 1478 aa21.09■□□□□ 0.97
MUC1-208ENST00000368393 HECW1Q76N89 1606 aa21.08■□□□□ 0.97
MUC1-208ENST00000368393 LRRIQ1Q96JM4 1722 aa21.08■□□□□ 0.97
MUC1-208ENST00000368393 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
MUC1-208ENST00000368393 MAGI3Q5TCQ9 1506 aa21.03■□□□□ 0.96
MUC1-208ENST00000368393 PLEKHD1A6NEE1 506 aa20.99■□□□□ 0.95
MUC1-208ENST00000368393 KCNH8Q96L42 1107 aa20.99■□□□□ 0.95
MUC1-208ENST00000368393 ATP1B4Q9UN42 357 aaPredicted RBP20.98■□□□□ 0.95
MUC1-208ENST00000368393 CCDC18Q5T9S5 1454 aa20.98■□□□□ 0.95
MUC1-208ENST00000368393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.97■□□□□ 0.95
MUC1-208ENST00000368393 HNRNPUL2Q1KMD3 747 aaKnown RBP20.97■□□□□ 0.95
MUC1-208ENST00000368393 MAP3K4Q9Y6R4 1608 aa20.96■□□□□ 0.95
MUC1-208ENST00000368393 TROQ12816 1431 aaPredicted RBP20.96■□□□□ 0.95
MUC1-208ENST00000368393 PPRC1Q5VV67 1664 aaKnown RBP20.96■□□□□ 0.95
MUC1-208ENST00000368393 ABCA9Q8IUA7 1624 aa20.93■□□□□ 0.94
MUC1-208ENST00000368393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.93■□□□□ 0.94
MUC1-208ENST00000368393 CD109Q6YHK3 1445 aa20.92■□□□□ 0.94
MUC1-208ENST00000368393 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.93
MUC1-208ENST00000368393 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
MUC1-208ENST00000368393 COL17A1Q9UMD9 1497 aaPredicted RBP20.88■□□□□ 0.93
MUC1-208ENST00000368393 KIF14Q15058 1648 aa20.87■□□□□ 0.93
MUC1-208ENST00000368393 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
MUC1-208ENST00000368393 TTC37Q6PGP7 1564 aa20.86■□□□□ 0.93
MUC1-208ENST00000368393 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
MUC1-208ENST00000368393 TIAM1Q13009 1591 aa20.84■□□□□ 0.93
MUC1-208ENST00000368393 PLCH2O75038 1416 aa20.82■□□□□ 0.92
MUC1-208ENST00000368393 LRRC9Q6ZRR7 1453 aa20.8■□□□□ 0.92
MUC1-208ENST00000368393 TEX14Q8IWB6 1497 aa20.78■□□□□ 0.92
MUC1-208ENST00000368393 TSPOAP1O95153 1857 aa20.77■□□□□ 0.92
MUC1-208ENST00000368393 MTUS2Q5JR59 1369 aa20.76■□□□□ 0.91
MUC1-208ENST00000368393 EHBP1L1Q8N3D4 1523 aa20.76■□□□□ 0.91
MUC1-208ENST00000368393 ARAP3Q8WWN8 1544 aa20.76■□□□□ 0.91
MUC1-208ENST00000368393 GPATCH8Q9UKJ3 1502 aaKnown RBP20.76■□□□□ 0.91
MUC1-208ENST00000368393 NEO1Q92859 1461 aa20.75■□□□□ 0.91
MUC1-208ENST00000368393 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
MUC1-208ENST00000368393 FANCAO15360 1455 aa20.71■□□□□ 0.91
MUC1-208ENST00000368393 AKNAQ7Z591 1439 aa20.7■□□□□ 0.9
MUC1-208ENST00000368393 NCOA2Q15596 1464 aa20.7■□□□□ 0.9
MUC1-208ENST00000368393 EFCAB2Q5VUJ9 269 aa20.66■□□□□ 0.9
MUC1-208ENST00000368393 KDM6BO15054 1643 aa20.66■□□□□ 0.9
MUC1-208ENST00000368393 PREX2Q70Z35 1606 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms