RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 PTPRGP23470 1445 aa11.78□□□□□ -0.52
SSR2-202ENST00000368311 PEG3Q9GZU2 1588 aa11.77□□□□□ -0.52
SSR2-202ENST00000368311 NEFMP07197 916 aa11.76□□□□□ -0.53
SSR2-202ENST00000368311 CCNB3Q8WWL7 1395 aa11.76□□□□□ -0.53
SSR2-202ENST00000368311 JPH4Q96JJ6 628 aa11.76□□□□□ -0.53
SSR2-202ENST00000368311 SYNJ1O43426 1573 aa11.76□□□□□ -0.53
SSR2-202ENST00000368311 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
SSR2-202ENST00000368311 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
SSR2-202ENST00000368311 ARID3CA6NKF2 412 aa11.75□□□□□ -0.53
SSR2-202ENST00000368311 FOXD1Q16676 465 aa11.73□□□□□ -0.53
SSR2-202ENST00000368311 MAGI1Q96QZ7 1491 aaPredicted RBP11.73□□□□□ -0.53
SSR2-202ENST00000368311 SLC24A1O60721 1099 aa11.73□□□□□ -0.53
SSR2-202ENST00000368311 CYB5RLQ6IPT4 315 aa11.73□□□□□ -0.53
SSR2-202ENST00000368311 TNIKQ9UKE5 1360 aa11.72□□□□□ -0.53
SSR2-202ENST00000368311 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
SSR2-202ENST00000368311 POGZQ7Z3K3 1410 aa11.7□□□□□ -0.54
SSR2-202ENST00000368311 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
SSR2-202ENST00000368311 TRIM26Q12899 539 aaPredicted RBP11.69□□□□□ -0.54
SSR2-202ENST00000368311 C14orf37Q86TY3 774 aa11.68□□□□□ -0.54
SSR2-202ENST00000368311 CCDC18Q5T9S5 1454 aa11.68□□□□□ -0.54
SSR2-202ENST00000368311 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
SSR2-202ENST00000368311 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
SSR2-202ENST00000368311 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
SSR2-202ENST00000368311 PLPPR3Q6T4P5 718 aa11.67□□□□□ -0.54
SSR2-202ENST00000368311 PCGF6Q9BYE7 350 aa11.66□□□□□ -0.54
SSR2-202ENST00000368311 SYNJ2O15056 1496 aa11.64□□□□□ -0.55
SSR2-202ENST00000368311 ZNF326Q5BKZ1 582 aaKnown RBP11.62□□□□□ -0.55
SSR2-202ENST00000368311 DNAJC5BQ9UF47 199 aa11.62□□□□□ -0.55
SSR2-202ENST00000368311 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
SSR2-202ENST00000368311 FAM69CQ0P6D2 419 aa11.61□□□□□ -0.55
SSR2-202ENST00000368311 HAP1P54257 671 aaPredicted RBP11.59□□□□□ -0.55
SSR2-202ENST00000368311 SNAPC4Q5SXM2 1469 aa11.58□□□□□ -0.56
SSR2-202ENST00000368311 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.565e-8■□□□□ 8.5
SSR2-202ENST00000368311 NESP48681 1621 aa11.57□□□□□ -0.56
SSR2-202ENST00000368311 PLEKHH2Q8IVE3 1493 aa11.57□□□□□ -0.56
SSR2-202ENST00000368311 PHLDB1Q86UU1 1377 aa11.56□□□□□ -0.56
SSR2-202ENST00000368311 TEX14Q8IWB6 1497 aa11.56□□□□□ -0.56
SSR2-202ENST00000368311 PRG4Q92954 1404 aaPredicted RBP11.56□□□□□ -0.56
SSR2-202ENST00000368311 CUL7Q14999 1698 aa11.55□□□□□ -0.56
SSR2-202ENST00000368311 CDCA8Q53HL2 280 aa11.55□□□□□ -0.56
SSR2-202ENST00000368311 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
SSR2-202ENST00000368311 AQRO60306 1485 aaKnown RBP eCLIP11.55□□□□□ -0.56
SSR2-202ENST00000368311 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
SSR2-202ENST00000368311 POLR3GLQ9BT43 218 aa11.53□□□□□ -0.56
SSR2-202ENST00000368311 SPAG9O60271 1321 aaKnown RBP11.52□□□□□ -0.56
SSR2-202ENST00000368311 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.57
SSR2-202ENST00000368311 ANKRD30AQ9BXX3 1397 aa11.51□□□□□ -0.57
SSR2-202ENST00000368311 KIAA0586Q9BVV6 1533 aa11.51□□□□□ -0.57
SSR2-202ENST00000368311 DMRT2Q9Y5R5 561 aa11.51□□□□□ -0.57
SSR2-202ENST00000368311 EFCAB5A4FU69 1503 aa11.51□□□□□ -0.57
SSR2-202ENST00000368311 ARHGAP35Q9NRY4 1499 aa11.5□□□□□ -0.57
SSR2-202ENST00000368311 WDR62O43379 1518 aa11.5□□□□□ -0.57
SSR2-202ENST00000368311 RAD54L2Q9Y4B4 1467 aa11.5□□□□□ -0.57
SSR2-202ENST00000368311 PLB1Q6P1J6 1458 aa11.49□□□□□ -0.57
SSR2-202ENST00000368311 HMGB2P26583 209 aaKnown RBP11.49□□□□□ -0.57
SSR2-202ENST00000368311 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
SSR2-202ENST00000368311 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.47□□□□□ -0.57
SSR2-202ENST00000368311 NPM2Q86SE8 214 aaKnown RBP11.46□□□□□ -0.57
SSR2-202ENST00000368311 UACAQ9BZF9 1416 aa11.46□□□□□ -0.58
SSR2-202ENST00000368311 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
SSR2-202ENST00000368311 TONSLQ96HA7 1378 aa11.45□□□□□ -0.58
SSR2-202ENST00000368311 MLECQ14165 292 aa11.44□□□□□ -0.58
SSR2-202ENST00000368311 GRIN2AQ12879 1464 aa11.43□□□□□ -0.58
SSR2-202ENST00000368311 IGF1RP08069 1367 aa11.42□□□□□ -0.58
SSR2-202ENST00000368311 SCAF1Q9H7N4 1312 aaKnown RBP11.42□□□□□ -0.58
SSR2-202ENST00000368311 PPP6R1Q9UPN7 881 aa11.42□□□□□ -0.58
SSR2-202ENST00000368311 CUX1P39880 1505 aa11.42□□□□□ -0.58
SSR2-202ENST00000368311 WASHC2CQ9Y4E1 1318 aa11.39□□□□□ -0.59
SSR2-202ENST00000368311 POGKQ9P215 609 aa11.38□□□□□ -0.59
SSR2-202ENST00000368311 NEFLP07196 543 aa11.38□□□□□ -0.59
SSR2-202ENST00000368311 GGT6Q6P531 493 aa11.38□□□□□ -0.59
SSR2-202ENST00000368311 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
SSR2-202ENST00000368311 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
SSR2-202ENST00000368311 URB2Q14146 1524 aaKnown RBP11.37□□□□□ -0.59
SSR2-202ENST00000368311 HECW1Q76N89 1606 aa11.37□□□□□ -0.59
SSR2-202ENST00000368311 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
SSR2-202ENST00000368311 IQGAP2Q13576 1575 aa11.36□□□□□ -0.59
SSR2-202ENST00000368311 AKNAQ7Z591 1439 aa11.36□□□□□ -0.59
SSR2-202ENST00000368311 VPS8Q8N3P4 1428 aa11.36□□□□□ -0.59
SSR2-202ENST00000368311 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
SSR2-202ENST00000368311 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
SSR2-202ENST00000368311 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
SSR2-202ENST00000368311 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
SSR2-202ENST00000368311 KIF21BO75037 1637 aa11.33□□□□□ -0.6
SSR2-202ENST00000368311 EIF3AQ14152 1382 aaKnown RBP11.33□□□□□ -0.6
SSR2-202ENST00000368311 EIF4G2P78344 907 aaKnown RBP eCLIP11.32□□□□□ -0.6
SSR2-202ENST00000368311 KIF3BO15066 747 aa11.31□□□□□ -0.6
SSR2-202ENST00000368311 ARHGAP5Q13017 1502 aa11.31□□□□□ -0.6
SSR2-202ENST00000368311 CENPBP07199 599 aaPredicted RBP11.31□□□□□ -0.6
SSR2-202ENST00000368311 FHOD3Q2V2M9 1422 aa11.3□□□□□ -0.6
SSR2-202ENST00000368311 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
SSR2-202ENST00000368311 THEMISQ8N1K5 641 aaPredicted RBP11.29□□□□□ -0.6
SSR2-202ENST00000368311 MYOM3Q5VTT5 1437 aa11.29□□□□□ -0.6
SSR2-202ENST00000368311 CD109Q6YHK3 1445 aa11.28□□□□□ -0.6
SSR2-202ENST00000368311 FYCO1Q9BQS8 1478 aa11.28□□□□□ -0.6
SSR2-202ENST00000368311 MEX3CQ5U5Q3 659 aaKnown RBP11.28□□□□□ -0.6
SSR2-202ENST00000368311 CHMP4AQ9BY43 222 aa11.28□□□□□ -0.6
SSR2-202ENST00000368311 CASKIN1Q8WXD9 1431 aa11.27□□□□□ -0.6
SSR2-202ENST00000368311 BIVM-ERCC5R4GMW8 1640 aa11.27□□□□□ -0.6
SSR2-202ENST00000368311 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms