RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 JPH4Q96JJ6 628 aa23.73■■□□□ 1.39
PMF1-202ENST00000368277 KIF27Q86VH2 1401 aa23.72■■□□□ 1.39
PMF1-202ENST00000368277 IGF1RP08069 1367 aa23.7■■□□□ 1.38
PMF1-202ENST00000368277 ADCY10Q96PN6 1610 aa23.64■■□□□ 1.38
PMF1-202ENST00000368277 KIAA0586Q9BVV6 1533 aa23.62■■□□□ 1.37
PMF1-202ENST00000368277 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
PMF1-202ENST00000368277 DIP2BQ9P265 1576 aa23.51■■□□□ 1.35
PMF1-202ENST00000368277 TSPOAP1O95153 1857 aa23.5■■□□□ 1.35
PMF1-202ENST00000368277 IQGAP2Q13576 1575 aa23.5■■□□□ 1.35
PMF1-202ENST00000368277 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
PMF1-202ENST00000368277 MAPKBP1O60336 1514 aa23.49■■□□□ 1.35
PMF1-202ENST00000368277 ABCC10Q5T3U5 1492 aa23.46■■□□□ 1.35
PMF1-202ENST00000368277 NPM1P06748 294 aaKnown RBP eCLIP23.42■■□□□ 1.34
PMF1-202ENST00000368277 FAM69CQ0P6D2 419 aa23.42■■□□□ 1.34
PMF1-202ENST00000368277 PTPRGP23470 1445 aa23.39■■□□□ 1.33
PMF1-202ENST00000368277 CTTNBP2Q8WZ74 1663 aa23.38■■□□□ 1.33
PMF1-202ENST00000368277 DISP1Q96F81 1524 aa23.37■■□□□ 1.33
PMF1-202ENST00000368277 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
PMF1-202ENST00000368277 TNIKQ9UKE5 1360 aa23.36■■□□□ 1.33
PMF1-202ENST00000368277 CARMIL2Q6F5E8 1435 aa23.35■■□□□ 1.33
PMF1-202ENST00000368277 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
PMF1-202ENST00000368277 KIAA0556O60303 1618 aa23.32■■□□□ 1.32
PMF1-202ENST00000368277 ABCC2Q92887 1545 aa23.3■■□□□ 1.32
PMF1-202ENST00000368277 KDM6BO15054 1643 aa23.3■■□□□ 1.32
PMF1-202ENST00000368277 UGGT2Q9NYU1 1516 aa23.29■■□□□ 1.32
PMF1-202ENST00000368277 PPRC1Q5VV67 1664 aaKnown RBP23.27■■□□□ 1.32
PMF1-202ENST00000368277 ZCCHC11Q5TAX3 1644 aaKnown RBP23.25■■□□□ 1.31
PMF1-202ENST00000368277 ASXL2Q76L83 1435 aa23.24■■□□□ 1.31
PMF1-202ENST00000368277 UACAQ9BZF9 1416 aa23.24■■□□□ 1.31
PMF1-202ENST00000368277 UHRF1BP1LA0JNW5 1464 aa23.23■■□□□ 1.31
PMF1-202ENST00000368277 GLI2P10070 1586 aa23.16■■□□□ 1.3
PMF1-202ENST00000368277 PLB1Q6P1J6 1458 aa23.16■■□□□ 1.3
PMF1-202ENST00000368277 KDM5BQ9UGL1 1544 aa23.15■■□□□ 1.3
PMF1-202ENST00000368277 PRXQ9BXM0 1461 aa23.13■■□□□ 1.29
PMF1-202ENST00000368277 MAP3K4Q9Y6R4 1608 aa23.13■■□□□ 1.29
PMF1-202ENST00000368277 EPRSP07814 1512 aaKnown RBP23.1■■□□□ 1.29
PMF1-202ENST00000368277 ABCA8O94911 1581 aa23.07■■□□□ 1.28
PMF1-202ENST00000368277 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
PMF1-202ENST00000368277 WDR7Q9Y4E6 1490 aa23■■□□□ 1.27
PMF1-202ENST00000368277 COL17A1Q9UMD9 1497 aaPredicted RBP22.99■■□□□ 1.27
PMF1-202ENST00000368277 P3H3Q8IVL6 736 aa22.97■■□□□ 1.27
PMF1-202ENST00000368277 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
PMF1-202ENST00000368277 CFAP43Q8NDM7 1665 aa22.95■■□□□ 1.26
PMF1-202ENST00000368277 SAMD9Q5K651 1589 aa22.94■■□□□ 1.26
PMF1-202ENST00000368277 ARID3CA6NKF2 412 aa22.94■■□□□ 1.26
PMF1-202ENST00000368277 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
PMF1-202ENST00000368277 CSRNP3Q8WYN3 585 aa22.9■■□□□ 1.26
PMF1-202ENST00000368277 KCNH8Q96L42 1107 aa22.89■■□□□ 1.25
PMF1-202ENST00000368277 RAPGEF6Q8TEU7 1601 aa22.86■■□□□ 1.25
PMF1-202ENST00000368277 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
PMF1-202ENST00000368277 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
PMF1-202ENST00000368277 ADGRL1O94910 1474 aa22.85■■□□□ 1.25
PMF1-202ENST00000368277 CD109Q6YHK3 1445 aa22.83■■□□□ 1.25
PMF1-202ENST00000368277 ATP10BO94823 1461 aa22.83■■□□□ 1.25
PMF1-202ENST00000368277 MAGI3Q5TCQ9 1506 aa22.81■■□□□ 1.24
PMF1-202ENST00000368277 EEA1Q15075 1411 aa22.79■■□□□ 1.24
PMF1-202ENST00000368277 FHOD3Q2V2M9 1422 aa22.79■■□□□ 1.24
PMF1-202ENST00000368277 KIF21BO75037 1637 aa22.77■■□□□ 1.24
PMF1-202ENST00000368277 ABCA9Q8IUA7 1624 aa22.76■■□□□ 1.23
PMF1-202ENST00000368277 NUP153P49790 1475 aaKnown RBP22.73■■□□□ 1.23
PMF1-202ENST00000368277 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
PMF1-202ENST00000368277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.67■■□□□ 1.22
PMF1-202ENST00000368277 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
PMF1-202ENST00000368277 EFCAB5A4FU69 1503 aa22.65■■□□□ 1.22
PMF1-202ENST00000368277 ARAP3Q8WWN8 1544 aa22.62■■□□□ 1.21
PMF1-202ENST00000368277 FRMPD1Q5SYB0 1578 aa22.61■■□□□ 1.21
PMF1-202ENST00000368277 CDK13Q14004 1512 aaKnown RBP22.59■■□□□ 1.21
PMF1-202ENST00000368277 TTC37Q6PGP7 1564 aa22.58■■□□□ 1.2
PMF1-202ENST00000368277 HECW2Q9P2P5 1572 aa22.57■■□□□ 1.2
PMF1-202ENST00000368277 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
PMF1-202ENST00000368277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.54■■□□□ 1.2
PMF1-202ENST00000368277 RICTORQ6R327 1708 aa22.54■■□□□ 1.2
PMF1-202ENST00000368277 NEO1Q92859 1461 aa22.54■■□□□ 1.2
PMF1-202ENST00000368277 RAPGEF3O95398 923 aa22.53■■□□□ 1.2
PMF1-202ENST00000368277 LRRIQ1Q96JM4 1722 aa22.52■■□□□ 1.2
PMF1-202ENST00000368277 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
PMF1-202ENST00000368277 ARHGAP35Q9NRY4 1499 aa22.49■■□□□ 1.19
PMF1-202ENST00000368277 ADAMTSL3P82987 1691 aa22.48■■□□□ 1.19
PMF1-202ENST00000368277 CFAP74Q9C0B2 1584 aa22.47■■□□□ 1.19
PMF1-202ENST00000368277 HECW1Q76N89 1606 aa22.47■■□□□ 1.19
PMF1-202ENST00000368277 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
PMF1-202ENST00000368277 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
PMF1-202ENST00000368277 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.19
PMF1-202ENST00000368277 FANCAO15360 1455 aa22.44■■□□□ 1.18
PMF1-202ENST00000368277 ARHGEF40Q8TER5 1519 aa22.44■■□□□ 1.18
PMF1-202ENST00000368277 SIGLEC1Q9BZZ2 1709 aa22.44■■□□□ 1.18
PMF1-202ENST00000368277 KIF14Q15058 1648 aa22.43■■□□□ 1.18
PMF1-202ENST00000368277 MADDQ8WXG6 1647 aa22.43■■□□□ 1.18
PMF1-202ENST00000368277 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
PMF1-202ENST00000368277 MYO5CQ9NQX4 1742 aa22.43■■□□□ 1.18
PMF1-202ENST00000368277 AKNAQ7Z591 1439 aa22.42■■□□□ 1.18
PMF1-202ENST00000368277 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
PMF1-202ENST00000368277 RIMS1Q86UR5 1692 aaKnown RBP22.39■■□□□ 1.17
PMF1-202ENST00000368277 FMN1Q68DA7 1419 aa22.37■■□□□ 1.17
PMF1-202ENST00000368277 PTPRMP28827 1452 aa22.35■■□□□ 1.17
PMF1-202ENST00000368277 PCF11O94913 1555 aaKnown RBP22.35■■□□□ 1.17
PMF1-202ENST00000368277 ZMYM4Q5VZL5 1548 aa22.34■■□□□ 1.17
PMF1-202ENST00000368277 ARID4BQ4LE39 1312 aaPredicted RBP22.33■■□□□ 1.17
PMF1-202ENST00000368277 YEATS2Q9ULM3 1422 aa22.32■■□□□ 1.16
PMF1-202ENST00000368277 ZFYVE16Q7Z3T8 1539 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms