RNA–Protein interactions for RNA: ENST00000368261.7

CCT3-205, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 5

Gene CCT3, Length 863 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-205ENST00000368261 CLIP1P30622 1438 aa17.58■□□□□ 0.41
CCT3-205ENST00000368261 ARHGAP35Q9NRY4 1499 aa17.56■□□□□ 0.4
CCT3-205ENST00000368261 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
CCT3-205ENST00000368261 NUP160Q12769 1436 aa17.54■□□□□ 0.4
CCT3-205ENST00000368261 SAMD9Q5K651 1589 aa17.53■□□□□ 0.4
CCT3-205ENST00000368261 IQGAP2Q13576 1575 aa17.53■□□□□ 0.4
CCT3-205ENST00000368261 EFCAB5A4FU69 1503 aa17.49■□□□□ 0.39
CCT3-205ENST00000368261 KIAA0586Q9BVV6 1533 aa17.48■□□□□ 0.39
CCT3-205ENST00000368261 UGGT2Q9NYU1 1516 aa17.47■□□□□ 0.39
CCT3-205ENST00000368261 CHMP7Q8WUX9 453 aaPredicted RBP17.43■□□□□ 0.38
CCT3-205ENST00000368261 VPS8Q8N3P4 1428 aa17.43■□□□□ 0.38
CCT3-205ENST00000368261 SHROOM2Q13796 1616 aa17.41■□□□□ 0.38
CCT3-205ENST00000368261 CLASP1Q7Z460 1538 aa17.41■□□□□ 0.38
CCT3-205ENST00000368261 KIAA0556O60303 1618 aa17.39■□□□□ 0.38
CCT3-205ENST00000368261 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
CCT3-205ENST00000368261 RANGAP1P46060 587 aaPredicted RBP17.38■□□□□ 0.37
CCT3-205ENST00000368261 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
CCT3-205ENST00000368261 FBLN2P98095 1184 aa17.35■□□□□ 0.37
CCT3-205ENST00000368261 PCF11O94913 1555 aaKnown RBP17.35■□□□□ 0.37
CCT3-205ENST00000368261 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.37
CCT3-205ENST00000368261 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.36
CCT3-205ENST00000368261 P3H3Q8IVL6 736 aa17.27■□□□□ 0.36
CCT3-205ENST00000368261 ERCC6L2Q5T890 1561 aa17.26■□□□□ 0.35
CCT3-205ENST00000368261 FYCO1Q9BQS8 1478 aa17.24■□□□□ 0.35
CCT3-205ENST00000368261 CASKIN1Q8WXD9 1431 aa17.24■□□□□ 0.35
CCT3-205ENST00000368261 JPH4Q96JJ6 628 aa17.24■□□□□ 0.35
CCT3-205ENST00000368261 FMN1Q68DA7 1419 aa17.23■□□□□ 0.35
CCT3-205ENST00000368261 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
CCT3-205ENST00000368261 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
CCT3-205ENST00000368261 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.34
CCT3-205ENST00000368261 RAPGEF6Q8TEU7 1601 aa17.18■□□□□ 0.34
CCT3-205ENST00000368261 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
CCT3-205ENST00000368261 ABCA8O94911 1581 aa17.17■□□□□ 0.34
CCT3-205ENST00000368261 HECW1Q76N89 1606 aa17.17■□□□□ 0.34
CCT3-205ENST00000368261 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
CCT3-205ENST00000368261 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
CCT3-205ENST00000368261 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
CCT3-205ENST00000368261 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
CCT3-205ENST00000368261 EPRSP07814 1512 aaKnown RBP17.09■□□□□ 0.33
CCT3-205ENST00000368261 MAGI3Q5TCQ9 1506 aa17.09■□□□□ 0.33
CCT3-205ENST00000368261 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.32
CCT3-205ENST00000368261 LRRC9Q6ZRR7 1453 aa17.08■□□□□ 0.32
CCT3-205ENST00000368261 KANK4Q5T7N3 995 aaPredicted RBP17.08■□□□□ 0.32
CCT3-205ENST00000368261 CCDC18Q5T9S5 1454 aa17.07■□□□□ 0.32
CCT3-205ENST00000368261 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
CCT3-205ENST00000368261 PTPRGP23470 1445 aa17.04■□□□□ 0.32
CCT3-205ENST00000368261 EHBP1L1Q8N3D4 1523 aa17.01■□□□□ 0.31
CCT3-205ENST00000368261 ABCC2Q92887 1545 aa17.01■□□□□ 0.31
CCT3-205ENST00000368261 UACAQ9BZF9 1416 aa16.99■□□□□ 0.31
CCT3-205ENST00000368261 APLP2Q06481 763 aa16.99■□□□□ 0.31
CCT3-205ENST00000368261 ARHGEF11O15085 1522 aa16.99■□□□□ 0.31
CCT3-205ENST00000368261 UHRF1BP1LA0JNW5 1464 aa16.99■□□□□ 0.31
CCT3-205ENST00000368261 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
CCT3-205ENST00000368261 ATP10BO94823 1461 aa16.98■□□□□ 0.31
CCT3-205ENST00000368261 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
CCT3-205ENST00000368261 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.31
CCT3-205ENST00000368261 TRIM26Q12899 539 aaPredicted RBP16.96■□□□□ 0.31
CCT3-205ENST00000368261 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
CCT3-205ENST00000368261 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
CCT3-205ENST00000368261 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
CCT3-205ENST00000368261 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
CCT3-205ENST00000368261 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
CCT3-205ENST00000368261 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
CCT3-205ENST00000368261 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
CCT3-205ENST00000368261 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
CCT3-205ENST00000368261 KIF14Q15058 1648 aa16.91■□□□□ 0.3
CCT3-205ENST00000368261 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
CCT3-205ENST00000368261 MTUS2Q5JR59 1369 aa16.89■□□□□ 0.3
CCT3-205ENST00000368261 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
CCT3-205ENST00000368261 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
CCT3-205ENST00000368261 PCGF6Q9BYE7 350 aa16.87■□□□□ 0.29
CCT3-205ENST00000368261 ABCC10Q5T3U5 1492 aa16.84■□□□□ 0.29
CCT3-205ENST00000368261 CDC42BPAQ5VT25 1732 aa16.83■□□□□ 0.28
CCT3-205ENST00000368261 MYOM3Q5VTT5 1437 aa16.81■□□□□ 0.28
CCT3-205ENST00000368261 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
CCT3-205ENST00000368261 ITSN2Q9NZM3 1697 aa16.79■□□□□ 0.28
CCT3-205ENST00000368261 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
CCT3-205ENST00000368261 PTPN23Q9H3S7 1636 aa16.78■□□□□ 0.28
CCT3-205ENST00000368261 TTC37Q6PGP7 1564 aa16.77■□□□□ 0.28
CCT3-205ENST00000368261 TCOF1Q13428 1488 aaKnown RBP16.77■□□□□ 0.28
CCT3-205ENST00000368261 CDC42BPBQ9Y5S2 1711 aa16.76■□□□□ 0.27
CCT3-205ENST00000368261 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
CCT3-205ENST00000368261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCT3-205ENST00000368261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCT3-205ENST00000368261 GPATCH8Q9UKJ3 1502 aaKnown RBP16.75■□□□□ 0.27
CCT3-205ENST00000368261 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
CCT3-205ENST00000368261 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
CCT3-205ENST00000368261 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
CCT3-205ENST00000368261 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
CCT3-205ENST00000368261 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
CCT3-205ENST00000368261 MYO5CQ9NQX4 1742 aa16.72■□□□□ 0.27
CCT3-205ENST00000368261 WDR7Q9Y4E6 1490 aa16.71■□□□□ 0.27
CCT3-205ENST00000368261 ABCA9Q8IUA7 1624 aa16.69■□□□□ 0.26
CCT3-205ENST00000368261 ASXL2Q76L83 1435 aa16.68■□□□□ 0.26
CCT3-205ENST00000368261 MAPKBP1O60336 1514 aa16.67■□□□□ 0.26
CCT3-205ENST00000368261 DNMT1P26358 1616 aaKnown RBP16.66■□□□□ 0.26
CCT3-205ENST00000368261 SAMD9LQ8IVG5 1584 aa16.65■□□□□ 0.26
CCT3-205ENST00000368261 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
CCT3-205ENST00000368261 CAMSAP2Q08AD1 1489 aa16.65■□□□□ 0.26
CCT3-205ENST00000368261 CROCC2H7BZ55 1655 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms