RNA–Protein interactions for RNA: ENST00000367520.3

COLGALT2-202, Transcript of collagen beta(1-O)galactosyltransferase 2, humanhuman

TSL 2 BASIC

Gene COLGALT2, Length 2,325 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT2-202ENST00000367520 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
COLGALT2-202ENST00000367520 CDK11BP21127 795 aaKnown RBP12.82□□□□□ -0.36
COLGALT2-202ENST00000367520 CDK11AQ9UQ88 783 aaPredicted RBP12.82□□□□□ -0.36
COLGALT2-202ENST00000367520 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
COLGALT2-202ENST00000367520 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
COLGALT2-202ENST00000367520 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
COLGALT2-202ENST00000367520 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
COLGALT2-202ENST00000367520 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
COLGALT2-202ENST00000367520 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.36
COLGALT2-202ENST00000367520 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
COLGALT2-202ENST00000367520 PDIA4P13667 645 aaKnown RBP12.74□□□□□ -0.37
COLGALT2-202ENST00000367520 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
COLGALT2-202ENST00000367520 ZBTB7CA1YPR0 619 aa12.73□□□□□ -0.37
COLGALT2-202ENST00000367520 C1orf115Q9H7X2 142 aa12.72□□□□□ -0.37
COLGALT2-202ENST00000367520 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
COLGALT2-202ENST00000367520 HSP90B1P14625 803 aaKnown RBP12.66□□□□□ -0.38
COLGALT2-202ENST00000367520 ZMYND15Q9H091 742 aa12.66□□□□□ -0.38
COLGALT2-202ENST00000367520 SOGA1O94964 1423 aa12.65□□□□□ -0.38
COLGALT2-202ENST00000367520 RUSC2Q8N2Y8 1516 aa12.65□□□□□ -0.38
COLGALT2-202ENST00000367520 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
COLGALT2-202ENST00000367520 RSPH6AQ9H0K4 717 aa12.61□□□□□ -0.39
COLGALT2-202ENST00000367520 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
COLGALT2-202ENST00000367520 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
COLGALT2-202ENST00000367520 HMGB1P09429 215 aaKnown RBP12.61□□□□□ -0.39
COLGALT2-202ENST00000367520 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
COLGALT2-202ENST00000367520 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
COLGALT2-202ENST00000367520 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
COLGALT2-202ENST00000367520 NESP48681 1621 aa12.56□□□□□ -0.4
COLGALT2-202ENST00000367520 RGL2O15211 777 aa12.55□□□□□ -0.4
COLGALT2-202ENST00000367520 PPARGC1BQ86YN6 1023 aaKnown RBP12.55□□□□□ -0.4
COLGALT2-202ENST00000367520 UBE2Q2Q8WVN8 375 aa12.54□□□□□ -0.4
COLGALT2-202ENST00000367520 PUS7Q96PZ0 661 aaKnown RBP12.54□□□□□ -0.4
COLGALT2-202ENST00000367520 NEUROD2Q15784 382 aa12.54□□□□□ -0.4
COLGALT2-202ENST00000367520 ARID3CA6NKF2 412 aa12.5□□□□□ -0.41
COLGALT2-202ENST00000367520 CFTRP13569 1480 aa12.5□□□□□ -0.41
COLGALT2-202ENST00000367520 ZNF428Q96B54 188 aa12.49□□□□□ -0.41
COLGALT2-202ENST00000367520 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
COLGALT2-202ENST00000367520 CADPSQ9ULU8 1353 aa12.47□□□□□ -0.41
COLGALT2-202ENST00000367520 CUX1P39880 1505 aa12.47□□□□□ -0.41
COLGALT2-202ENST00000367520 PCGF6Q9BYE7 350 aa12.46□□□□□ -0.41
COLGALT2-202ENST00000367520 KCTD17Q8N5Z5 321 aa12.46□□□□□ -0.41
COLGALT2-202ENST00000367520 RAD21O60216 631 aa12.44□□□□□ -0.42
COLGALT2-202ENST00000367520 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
COLGALT2-202ENST00000367520 RGS22Q8NE09 1264 aa12.43□□□□□ -0.42
COLGALT2-202ENST00000367520 CHGAP10645 457 aaKnown RBP12.42□□□□□ -0.42
COLGALT2-202ENST00000367520 LMOD2Q6P5Q4 547 aa12.41□□□□□ -0.42
COLGALT2-202ENST00000367520 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
COLGALT2-202ENST00000367520 TOP2BQ02880 1626 aa12.4□□□□□ -0.43
COLGALT2-202ENST00000367520 MTMR7Q9Y216 660 aa12.39□□□□□ -0.43
COLGALT2-202ENST00000367520 FANCD2Q9BXW9 1451 aa12.39□□□□□ -0.43
COLGALT2-202ENST00000367520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
COLGALT2-202ENST00000367520 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
COLGALT2-202ENST00000367520 APBB1O00213 710 aa12.36□□□□□ -0.43
COLGALT2-202ENST00000367520 RAPGEF2Q9Y4G8 1499 aa12.34□□□□□ -0.43
COLGALT2-202ENST00000367520 FOXD4L5Q5VV16 416 aaPredicted RBP12.33□□□□□ -0.44
COLGALT2-202ENST00000367520 FOXD4L4Q8WXT5 416 aaPredicted RBP12.33□□□□□ -0.44
COLGALT2-202ENST00000367520 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.44
COLGALT2-202ENST00000367520 RBM25P49756 843 aaKnown RBP12.32□□□□□ -0.44
COLGALT2-202ENST00000367520 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
COLGALT2-202ENST00000367520 FGD5Q6ZNL6 1462 aa12.32□□□□□ -0.44
COLGALT2-202ENST00000367520 PDE4CQ08493 712 aa12.31□□□□□ -0.44
COLGALT2-202ENST00000367520 CEP162Q5TB80 1403 aa12.31□□□□□ -0.44
COLGALT2-202ENST00000367520 POLR3GLQ9BT43 218 aa12.29□□□□□ -0.44
COLGALT2-202ENST00000367520 SLC24A3Q9HC58 644 aa12.29□□□□□ -0.44
COLGALT2-202ENST00000367520 CUX2O14529 1486 aa12.29□□□□□ -0.44
COLGALT2-202ENST00000367520 PRDM2Q13029 1718 aa12.27□□□□□ -0.44
COLGALT2-202ENST00000367520 PROM2Q8N271 834 aa12.27□□□□□ -0.44
COLGALT2-202ENST00000367520 BCL11AQ9H165 835 aa12.27□□□□□ -0.44
COLGALT2-202ENST00000367520 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
COLGALT2-202ENST00000367520 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
COLGALT2-202ENST00000367520 URB2Q14146 1524 aaKnown RBP12.26□□□□□ -0.45
COLGALT2-202ENST00000367520 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
COLGALT2-202ENST00000367520 EEA1Q15075 1411 aa12.26□□□□□ -0.45
COLGALT2-202ENST00000367520 SPDYE4A6NLX3 237 aa12.25□□□□□ -0.45
COLGALT2-202ENST00000367520 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
COLGALT2-202ENST00000367520 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
COLGALT2-202ENST00000367520 TNIKQ9UKE5 1360 aa12.23□□□□□ -0.45
COLGALT2-202ENST00000367520 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
COLGALT2-202ENST00000367520 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
COLGALT2-202ENST00000367520 TAF7LQ5H9L4 462 aa12.22□□□□□ -0.45
COLGALT2-202ENST00000367520 LAMC3Q9Y6N6 1575 aa12.22□□□□□ -0.45
COLGALT2-202ENST00000367520 TDRD9Q8NDG6 1382 aaKnown RBP12.21□□□□□ -0.45
COLGALT2-202ENST00000367520 AEBP1Q8IUX7 1158 aa12.19□□□□□ -0.46
COLGALT2-202ENST00000367520 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
COLGALT2-202ENST00000367520 ZC3H15Q8WU90 426 aaKnown RBP12.19□□□□□ -0.46
COLGALT2-202ENST00000367520 IGF1RP08069 1367 aa12.18□□□□□ -0.46
COLGALT2-202ENST00000367520 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
COLGALT2-202ENST00000367520 KIF21BO75037 1637 aa12.18□□□□□ -0.46
COLGALT2-202ENST00000367520 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
COLGALT2-202ENST00000367520 PRXQ9BXM0 1461 aa12.17□□□□□ -0.46
COLGALT2-202ENST00000367520 CLIP1P30622 1438 aa12.16□□□□□ -0.46
COLGALT2-202ENST00000367520 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
COLGALT2-202ENST00000367520 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
COLGALT2-202ENST00000367520 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
COLGALT2-202ENST00000367520 MFAP1P55081 439 aaKnown RBP12.15□□□□□ -0.46
COLGALT2-202ENST00000367520 USP35Q9P2H5 1018 aa12.15□□□□□ -0.46
COLGALT2-202ENST00000367520 TMCO4Q5TGY1 634 aa12.12□□□□□ -0.47
COLGALT2-202ENST00000367520 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
COLGALT2-202ENST00000367520 CARMIL1Q5VZK9 1371 aa12.12□□□□□ -0.47
COLGALT2-202ENST00000367520 FAM177A1Q8N128 213 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms