RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 JPH4Q96JJ6 628 aa25.76■■□□□ 1.71
CTSD-202ENST00000367196 IGF1RP08069 1367 aa25.74■■□□□ 1.71
CTSD-202ENST00000367196 KIAA0586Q9BVV6 1533 aa25.69■■□□□ 1.7
CTSD-202ENST00000367196 CARMIL1Q5VZK9 1371 aa25.61■■□□□ 1.69
CTSD-202ENST00000367196 NPM1P06748 294 aaKnown RBP eCLIP25.53■■□□□ 1.68
CTSD-202ENST00000367196 KIF13AQ9H1H9 1805 aa25.49■■□□□ 1.67
CTSD-202ENST00000367196 IQGAP2Q13576 1575 aa25.49■■□□□ 1.67
CTSD-202ENST00000367196 MAPKBP1O60336 1514 aa25.49■■□□□ 1.67
CTSD-202ENST00000367196 ADCY10Q96PN6 1610 aa25.48■■□□□ 1.67
CTSD-202ENST00000367196 CARMIL2Q6F5E8 1435 aa25.48■■□□□ 1.67
CTSD-202ENST00000367196 RAPGEF2Q9Y4G8 1499 aa25.43■■□□□ 1.66
CTSD-202ENST00000367196 ABCC10Q5T3U5 1492 aa25.42■■□□□ 1.66
CTSD-202ENST00000367196 PTPRGP23470 1445 aa25.41■■□□□ 1.66
CTSD-202ENST00000367196 TNIKQ9UKE5 1360 aa25.41■■□□□ 1.66
CTSD-202ENST00000367196 DIP2BQ9P265 1576 aa25.37■■□□□ 1.65
CTSD-202ENST00000367196 FAM69CQ0P6D2 419 aa25.35■■□□□ 1.65
CTSD-202ENST00000367196 UGGT2Q9NYU1 1516 aa25.31■■□□□ 1.64
CTSD-202ENST00000367196 ABCC2Q92887 1545 aa25.29■■□□□ 1.64
CTSD-202ENST00000367196 DISP1Q96F81 1524 aa25.29■■□□□ 1.64
CTSD-202ENST00000367196 TTBK1Q5TCY1 1321 aaPredicted RBP25.28■■□□□ 1.64
CTSD-202ENST00000367196 CTTNBP2Q8WZ74 1663 aa25.26■■□□□ 1.63
CTSD-202ENST00000367196 UHRF1BP1LA0JNW5 1464 aa25.26■■□□□ 1.63
CTSD-202ENST00000367196 KIAA0556O60303 1618 aa25.24■■□□□ 1.63
CTSD-202ENST00000367196 UACAQ9BZF9 1416 aa25.24■■□□□ 1.63
CTSD-202ENST00000367196 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
CTSD-202ENST00000367196 PLB1Q6P1J6 1458 aa25.21■■□□□ 1.63
CTSD-202ENST00000367196 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
CTSD-202ENST00000367196 PRXQ9BXM0 1461 aa25.16■■□□□ 1.62
CTSD-202ENST00000367196 TSPOAP1O95153 1857 aa25.16■■□□□ 1.62
CTSD-202ENST00000367196 ASXL2Q76L83 1435 aa25.16■■□□□ 1.62
CTSD-202ENST00000367196 KDM6BO15054 1643 aa25.14■■□□□ 1.61
CTSD-202ENST00000367196 KDM5BQ9UGL1 1544 aa25.13■■□□□ 1.61
CTSD-202ENST00000367196 GLI2P10070 1586 aa25.13■■□□□ 1.61
CTSD-202ENST00000367196 ZCCHC11Q5TAX3 1644 aaKnown RBP25.08■■□□□ 1.61
CTSD-202ENST00000367196 EPRSP07814 1512 aaKnown RBP25.02■■□□□ 1.6
CTSD-202ENST00000367196 FAM9AQ8IZU1 332 aaPredicted RBP25.01■■□□□ 1.59
CTSD-202ENST00000367196 EEA1Q15075 1411 aa25.01■■□□□ 1.59
CTSD-202ENST00000367196 PPRC1Q5VV67 1664 aaKnown RBP24.99■■□□□ 1.59
CTSD-202ENST00000367196 MAP3K4Q9Y6R4 1608 aa24.98■■□□□ 1.59
CTSD-202ENST00000367196 ABCA8O94911 1581 aa24.98■■□□□ 1.59
CTSD-202ENST00000367196 CSRNP3Q8WYN3 585 aa24.98■■□□□ 1.59
CTSD-202ENST00000367196 TEX14Q8IWB6 1497 aa24.97■■□□□ 1.59
CTSD-202ENST00000367196 WDR7Q9Y4E6 1490 aa24.97■■□□□ 1.59
CTSD-202ENST00000367196 SAMD9Q5K651 1589 aa24.87■■□□□ 1.57
CTSD-202ENST00000367196 CFAP43Q8NDM7 1665 aa24.86■■□□□ 1.57
CTSD-202ENST00000367196 MAGI3Q5TCQ9 1506 aa24.79■■□□□ 1.56
CTSD-202ENST00000367196 CD109Q6YHK3 1445 aa24.78■■□□□ 1.56
CTSD-202ENST00000367196 P3H3Q8IVL6 736 aa24.78■■□□□ 1.56
CTSD-202ENST00000367196 KIF21BO75037 1637 aa24.77■■□□□ 1.56
CTSD-202ENST00000367196 RAPGEF6Q8TEU7 1601 aa24.77■■□□□ 1.56
CTSD-202ENST00000367196 KCNH8Q96L42 1107 aa24.76■■□□□ 1.55
CTSD-202ENST00000367196 ATP10BO94823 1461 aa24.73■■□□□ 1.55
CTSD-202ENST00000367196 COL17A1Q9UMD9 1497 aaPredicted RBP24.73■■□□□ 1.55
CTSD-202ENST00000367196 EFCAB5A4FU69 1503 aa24.71■■□□□ 1.55
CTSD-202ENST00000367196 KDM4FA0A1W2PPD8 638 aa24.7■■□□□ 1.54
CTSD-202ENST00000367196 ARID3CA6NKF2 412 aa24.67■■□□□ 1.54
CTSD-202ENST00000367196 ABCA9Q8IUA7 1624 aa24.66■■□□□ 1.54
CTSD-202ENST00000367196 FHOD3Q2V2M9 1422 aa24.65■■□□□ 1.54
CTSD-202ENST00000367196 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.54
CTSD-202ENST00000367196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.63■■□□□ 1.53
CTSD-202ENST00000367196 HNRNPUL2Q1KMD3 747 aaKnown RBP24.63■■□□□ 1.53
CTSD-202ENST00000367196 ADGRL1O94910 1474 aa24.63■■□□□ 1.53
CTSD-202ENST00000367196 NUP153P49790 1475 aaKnown RBP24.63■■□□□ 1.53
CTSD-202ENST00000367196 PHLDB1Q86UU1 1377 aa24.6■■□□□ 1.53
CTSD-202ENST00000367196 ARAP3Q8WWN8 1544 aa24.58■■□□□ 1.53
CTSD-202ENST00000367196 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
CTSD-202ENST00000367196 NEO1Q92859 1461 aa24.53■■□□□ 1.52
CTSD-202ENST00000367196 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
CTSD-202ENST00000367196 PLEKHD1A6NEE1 506 aa24.51■■□□□ 1.51
CTSD-202ENST00000367196 FMN1Q68DA7 1419 aa24.46■■□□□ 1.51
CTSD-202ENST00000367196 CFAP74Q9C0B2 1584 aa24.46■■□□□ 1.51
CTSD-202ENST00000367196 HECW1Q76N89 1606 aa24.43■■□□□ 1.5
CTSD-202ENST00000367196 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
CTSD-202ENST00000367196 CDK13Q14004 1512 aaKnown RBP24.39■■□□□ 1.49
CTSD-202ENST00000367196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.39■■□□□ 1.497e-8■■□□□ 11.9
CTSD-202ENST00000367196 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
CTSD-202ENST00000367196 FANCAO15360 1455 aa24.37■■□□□ 1.49
CTSD-202ENST00000367196 TTC37Q6PGP7 1564 aa24.36■■□□□ 1.49
CTSD-202ENST00000367196 FRMPD1Q5SYB0 1578 aa24.35■■□□□ 1.49
CTSD-202ENST00000367196 RAPGEF3O95398 923 aa24.35■■□□□ 1.49
CTSD-202ENST00000367196 DENND4BO75064 1496 aaPredicted RBP24.33■■□□□ 1.49
CTSD-202ENST00000367196 CDK11AQ9UQ88 783 aaPredicted RBP24.33■■□□□ 1.49
CTSD-202ENST00000367196 AKNAQ7Z591 1439 aa24.33■■□□□ 1.49
CTSD-202ENST00000367196 RICTORQ6R327 1708 aa24.31■■□□□ 1.48
CTSD-202ENST00000367196 ATP1B4Q9UN42 357 aaPredicted RBP24.31■■□□□ 1.48
CTSD-202ENST00000367196 ARHGEF40Q8TER5 1519 aa24.29■■□□□ 1.48
CTSD-202ENST00000367196 HECW2Q9P2P5 1572 aa24.27■■□□□ 1.48
CTSD-202ENST00000367196 KIF14Q15058 1648 aa24.26■■□□□ 1.47
CTSD-202ENST00000367196 MYO5CQ9NQX4 1742 aa24.26■■□□□ 1.47
CTSD-202ENST00000367196 PLCH2O75038 1416 aa24.25■■□□□ 1.47
CTSD-202ENST00000367196 CLIP1P30622 1438 aa24.25■■□□□ 1.47
CTSD-202ENST00000367196 ZMYM4Q5VZL5 1548 aa24.25■■□□□ 1.47
CTSD-202ENST00000367196 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
CTSD-202ENST00000367196 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
CTSD-202ENST00000367196 MAGI2Q86UL8 1455 aa24.21■■□□□ 1.47
CTSD-202ENST00000367196 TROQ12816 1431 aaPredicted RBP24.21■■□□□ 1.47
CTSD-202ENST00000367196 ARID4BQ4LE39 1312 aaPredicted RBP24.21■■□□□ 1.47
CTSD-202ENST00000367196 CCDC18Q5T9S5 1454 aa24.19■■□□□ 1.46
CTSD-202ENST00000367196 ZFYVE16Q7Z3T8 1539 aa24.19■■□□□ 1.46
CTSD-202ENST00000367196 LRRIQ1Q96JM4 1722 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms