RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 FGD5Q6ZNL6 1462 aa14.41□□□□□ -0.1
ATF3-206ENST00000366987 EHMT2Q96KQ7 1210 aa14.41□□□□□ -0.1
ATF3-206ENST00000366987 POLA1P09884 1462 aaPredicted RBP14.4□□□□□ -0.1
ATF3-206ENST00000366987 RBM19Q9Y4C8 960 aaKnown RBP14.39□□□□□ -0.11
ATF3-206ENST00000366987 CCDC136Q96JN2 1154 aa14.39□□□□□ -0.11
ATF3-206ENST00000366987 IFT140Q96RY7 1462 aa14.35□□□□□ -0.11
ATF3-206ENST00000366987 ZNF316A6NFI3 1004 aaPredicted RBP14.35□□□□□ -0.11
ATF3-206ENST00000366987 TARBP1Q13395 1621 aaKnown RBP14.34□□□□□ -0.11
ATF3-206ENST00000366987 SOGA1O94964 1423 aa14.34□□□□□ -0.11
ATF3-206ENST00000366987 CCER1Q8TC90 406 aaPredicted RBP14.33□□□□□ -0.11
ATF3-206ENST00000366987 WDR97A6NE52 1622 aa14.33□□□□□ -0.11
ATF3-206ENST00000366987 YTHDC1Q96MU7 727 aaKnown RBP14.32□□□□□ -0.12
ATF3-206ENST00000366987 PDIA4P13667 645 aaKnown RBP14.31□□□□□ -0.12
ATF3-206ENST00000366987 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
ATF3-206ENST00000366987 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
ATF3-206ENST00000366987 PDE4CQ08493 712 aa14.29□□□□□ -0.12
ATF3-206ENST00000366987 MSH5O43196 834 aa14.27□□□□□ -0.12
ATF3-206ENST00000366987 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
ATF3-206ENST00000366987 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
ATF3-206ENST00000366987 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
ATF3-206ENST00000366987 FGD1P98174 961 aa14.22□□□□□ -0.13
ATF3-206ENST00000366987 EEA1Q15075 1411 aa14.2□□□□□ -0.14
ATF3-206ENST00000366987 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
ATF3-206ENST00000366987 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
ATF3-206ENST00000366987 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
ATF3-206ENST00000366987 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
ATF3-206ENST00000366987 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.18□□□□□ -0.14
ATF3-206ENST00000366987 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
ATF3-206ENST00000366987 MIER1Q8N108 512 aa14.17□□□□□ -0.14
ATF3-206ENST00000366987 ERICH3Q5RHP9 1530 aa14.16□□□□□ -0.14
ATF3-206ENST00000366987 AQRO60306 1485 aaKnown RBP eCLIP14.16□□□□□ -0.148e-7■□□□□ 9.1
ATF3-206ENST00000366987 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
ATF3-206ENST00000366987 ZMYND15Q9H091 742 aa14.15□□□□□ -0.14
ATF3-206ENST00000366987 PLPPR3Q6T4P5 718 aa14.13□□□□□ -0.15
ATF3-206ENST00000366987 C11orf95C9JLR9 678 aaPredicted RBP14.13□□□□□ -0.15
ATF3-206ENST00000366987 TAF7LQ5H9L4 462 aa14.13□□□□□ -0.15
ATF3-206ENST00000366987 CUL7Q14999 1698 aa14.13□□□□□ -0.15
ATF3-206ENST00000366987 RUSC2Q8N2Y8 1516 aa14.12□□□□□ -0.15
ATF3-206ENST00000366987 MAGI1Q96QZ7 1491 aaPredicted RBP14.1□□□□□ -0.15
ATF3-206ENST00000366987 AAMPQ13685 434 aa14.09□□□□□ -0.15
ATF3-206ENST00000366987 RTN4Q9NQC3 1192 aaKnown RBP14.09□□□□□ -0.15
ATF3-206ENST00000366987 KLHL34Q8N239 644 aa14.08□□□□□ -0.16
ATF3-206ENST00000366987 IGF1RP08069 1367 aa14.08□□□□□ -0.16
ATF3-206ENST00000366987 ADAMTS12P58397 1594 aa14.07□□□□□ -0.16
ATF3-206ENST00000366987 SNAPC4Q5SXM2 1469 aa14.07□□□□□ -0.16
ATF3-206ENST00000366987 FHAD1B1AJZ9 1412 aa14.05□□□□□ -0.16
ATF3-206ENST00000366987 IL27Q8NEV9 243 aa14.04□□□□□ -0.16
ATF3-206ENST00000366987 SYNJ2O15056 1496 aa14.03□□□□□ -0.16
ATF3-206ENST00000366987 KIF21BO75037 1637 aa14.03□□□□□ -0.16
ATF3-206ENST00000366987 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.16
ATF3-206ENST00000366987 CARMIL1Q5VZK9 1371 aa14.02□□□□□ -0.16
ATF3-206ENST00000366987 PRXQ9BXM0 1461 aa14.02□□□□□ -0.17
ATF3-206ENST00000366987 RTL5Q5HYW3 569 aaPredicted RBP14□□□□□ -0.17
ATF3-206ENST00000366987 CHD1O14646 1710 aa14□□□□□ -0.17
ATF3-206ENST00000366987 ZNF326Q5BKZ1 582 aaKnown RBP14□□□□□ -0.17
ATF3-206ENST00000366987 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
ATF3-206ENST00000366987 VSIG10Q8N0Z9 540 aa13.99□□□□□ -0.17
ATF3-206ENST00000366987 RBM10P98175 930 aaKnown RBP13.98□□□□□ -0.17
ATF3-206ENST00000366987 GRIN2AQ12879 1464 aa13.97□□□□□ -0.17
ATF3-206ENST00000366987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.18
ATF3-206ENST00000366987 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.18
ATF3-206ENST00000366987 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
ATF3-206ENST00000366987 BCL11BQ9C0K0 894 aaPredicted RBP13.94□□□□□ -0.18
ATF3-206ENST00000366987 FBLN2P98095 1184 aa13.92□□□□□ -0.18
ATF3-206ENST00000366987 NOP58Q9Y2X3 529 aaKnown RBP13.92□□□□□ -0.18
ATF3-206ENST00000366987 CTTNBP2Q8WZ74 1663 aa13.91□□□□□ -0.18
ATF3-206ENST00000366987 CDK11AQ9UQ88 783 aaPredicted RBP13.91□□□□□ -0.18
ATF3-206ENST00000366987 WASHC2CQ9Y4E1 1318 aa13.9□□□□□ -0.18
ATF3-206ENST00000366987 HOMEZQ8IX15 550 aa13.9□□□□□ -0.18
ATF3-206ENST00000366987 USP35Q9P2H5 1018 aa13.9□□□□□ -0.18
ATF3-206ENST00000366987 NUP160Q12769 1436 aa13.89□□□□□ -0.19
ATF3-206ENST00000366987 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
ATF3-206ENST00000366987 A0A0U1RQG5 324 aaPredicted RBP13.87□□□□□ -0.19
ATF3-206ENST00000366987 RRP9O43818 475 aaKnown RBP13.87□□□□□ -0.19
ATF3-206ENST00000366987 WASHC2AQ641Q2 1341 aa13.87□□□□□ -0.19
ATF3-206ENST00000366987 FKBP8Q14318 412 aa13.86□□□□□ -0.19
ATF3-206ENST00000366987 KIAA0586Q9BVV6 1533 aa13.84□□□□□ -0.19
ATF3-206ENST00000366987 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
ATF3-206ENST00000366987 IQGAP2Q13576 1575 aa13.83□□□□□ -0.19
ATF3-206ENST00000366987 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
ATF3-206ENST00000366987 UBTFP17480 764 aaKnown RBP13.83□□□□□ -0.2
ATF3-206ENST00000366987 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
ATF3-206ENST00000366987 FAM43AQ8N2R8 423 aa13.81□□□□□ -0.2
ATF3-206ENST00000366987 TNIKQ9UKE5 1360 aa13.81□□□□□ -0.2
ATF3-206ENST00000366987 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
ATF3-206ENST00000366987 BRD2P25440 801 aaKnown RBP13.79□□□□□ -0.2
ATF3-206ENST00000366987 SHROOM2Q13796 1616 aa13.78□□□□□ -0.2
ATF3-206ENST00000366987 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
ATF3-206ENST00000366987 BCANQ96GW7 911 aa13.76□□□□□ -0.21
ATF3-206ENST00000366987 UGGT2Q9NYU1 1516 aa13.76□□□□□ -0.21
ATF3-206ENST00000366987 NBR1Q14596 966 aa13.76□□□□□ -0.21
ATF3-206ENST00000366987 EFCAB5A4FU69 1503 aa13.73□□□□□ -0.21
ATF3-206ENST00000366987 HSP90AA2PQ14568 343 aaPredicted RBP13.73□□□□□ -0.21
ATF3-206ENST00000366987 SAMD9Q5K651 1589 aa13.72□□□□□ -0.21
ATF3-206ENST00000366987 JPH4Q96JJ6 628 aa13.71□□□□□ -0.21
ATF3-206ENST00000366987 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
ATF3-206ENST00000366987 PHF23Q9BUL5 403 aaPredicted RBP13.7□□□□□ -0.22
ATF3-206ENST00000366987 CARMIL2Q6F5E8 1435 aa13.7□□□□□ -0.22
ATF3-206ENST00000366987 KIAA0556O60303 1618 aa13.69□□□□□ -0.22
ATF3-206ENST00000366987 CEP162Q5TB80 1403 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms