RNA–Protein interactions for RNA: ENST00000366822.2

LINC01558-201, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2

Gene LINC01558, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-201ENST00000366822 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
LINC01558-201ENST00000366822 GOLGA3Q08378 1498 aa28.72■■■□□ 2.19
LINC01558-201ENST00000366822 CEP170Q5SW79 1584 aa28.72■■■□□ 2.19
LINC01558-201ENST00000366822 NUP160Q12769 1436 aa28.69■■■□□ 2.18
LINC01558-201ENST00000366822 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
LINC01558-201ENST00000366822 ARAP1Q96P48 1450 aa28.62■■■□□ 2.17
LINC01558-201ENST00000366822 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
LINC01558-201ENST00000366822 LOC105371045A0A1W2PR82 267 aa28.58■■■□□ 2.17
LINC01558-201ENST00000366822 UBTFP17480 764 aaKnown RBP28.58■■■□□ 2.17
LINC01558-201ENST00000366822 KIAA0586Q9BVV6 1533 aa28.57■■■□□ 2.16
LINC01558-201ENST00000366822 CYB5RLQ6IPT4 315 aa28.52■■■□□ 2.16
LINC01558-201ENST00000366822 CTTNBP2Q8WZ74 1663 aa28.51■■■□□ 2.15
LINC01558-201ENST00000366822 TNIKQ9UKE5 1360 aa28.5■■■□□ 2.15
LINC01558-201ENST00000366822 IQGAP2Q13576 1575 aa28.46■■■□□ 2.15
LINC01558-201ENST00000366822 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.14
LINC01558-201ENST00000366822 JPH4Q96JJ6 628 aa28.4■■■□□ 2.14
LINC01558-201ENST00000366822 UGGT2Q9NYU1 1516 aa28.37■■■□□ 2.13
LINC01558-201ENST00000366822 PRG4Q92954 1404 aaPredicted RBP28.28■■■□□ 2.12
LINC01558-201ENST00000366822 RANGAP1P46060 587 aaPredicted RBP28.26■■■□□ 2.11
LINC01558-201ENST00000366822 DISP1Q96F81 1524 aa28.25■■■□□ 2.11
LINC01558-201ENST00000366822 CEP162Q5TB80 1403 aa28.25■■■□□ 2.11
LINC01558-201ENST00000366822 SAMD9Q5K651 1589 aa28.23■■■□□ 2.11
LINC01558-201ENST00000366822 EFCAB5A4FU69 1503 aa28.23■■■□□ 2.11
LINC01558-201ENST00000366822 CLIP1P30622 1438 aa28.22■■■□□ 2.11
LINC01558-201ENST00000366822 CARMIL2Q6F5E8 1435 aa28.22■■■□□ 2.11
LINC01558-201ENST00000366822 KIAA0556O60303 1618 aa28.2■■■□□ 2.1
LINC01558-201ENST00000366822 ARHGAP35Q9NRY4 1499 aa28.2■■■□□ 2.1
LINC01558-201ENST00000366822 TRHP20396 242 aaPredicted RBP28.17■■■□□ 2.1
LINC01558-201ENST00000366822 P3H3Q8IVL6 736 aa28.13■■■□□ 2.09
LINC01558-201ENST00000366822 FHOD3Q2V2M9 1422 aa28.09■■■□□ 2.09
LINC01558-201ENST00000366822 PTPRGP23470 1445 aa28.03■■■□□ 2.08
LINC01558-201ENST00000366822 ADCY10Q96PN6 1610 aa28.01■■■□□ 2.07
LINC01558-201ENST00000366822 FMN1Q68DA7 1419 aa27.96■■■□□ 2.07
LINC01558-201ENST00000366822 TTBK1Q5TCY1 1321 aaPredicted RBP27.95■■■□□ 2.07
LINC01558-201ENST00000366822 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
LINC01558-201ENST00000366822 ABCA8O94911 1581 aa27.87■■■□□ 2.05
LINC01558-201ENST00000366822 VPS8Q8N3P4 1428 aa27.87■■■□□ 2.05
LINC01558-201ENST00000366822 UACAQ9BZF9 1416 aa27.87■■■□□ 2.05
LINC01558-201ENST00000366822 PLB1Q6P1J6 1458 aa27.87■■■□□ 2.05
LINC01558-201ENST00000366822 MAPKBP1O60336 1514 aa27.83■■■□□ 2.05
LINC01558-201ENST00000366822 CASKIN1Q8WXD9 1431 aa27.83■■■□□ 2.05
LINC01558-201ENST00000366822 UHRF1BP1LA0JNW5 1464 aa27.82■■■□□ 2.04
LINC01558-201ENST00000366822 RAPGEF6Q8TEU7 1601 aa27.81■■■□□ 2.04
LINC01558-201ENST00000366822 ABCC2Q92887 1545 aa27.8■■■□□ 2.04
LINC01558-201ENST00000366822 PCF11O94913 1555 aaKnown RBP27.78■■■□□ 2.04
LINC01558-201ENST00000366822 FYCO1Q9BQS8 1478 aa27.76■■■□□ 2.04
LINC01558-201ENST00000366822 NPM1P06748 294 aaKnown RBP eCLIP27.75■■■□□ 2.03
LINC01558-201ENST00000366822 NUP153P49790 1475 aaKnown RBP27.75■■■□□ 2.03
LINC01558-201ENST00000366822 HECW1Q76N89 1606 aa27.74■■■□□ 2.03
LINC01558-201ENST00000366822 DIP2BQ9P265 1576 aa27.73■■■□□ 2.03
LINC01558-201ENST00000366822 ATP1B4Q9UN42 357 aaPredicted RBP27.7■■■□□ 2.02
LINC01558-201ENST00000366822 KDM5BQ9UGL1 1544 aa27.67■■■□□ 2.02
LINC01558-201ENST00000366822 ZCCHC11Q5TAX3 1644 aaKnown RBP27.67■■■□□ 2.02
LINC01558-201ENST00000366822 EPRSP07814 1512 aaKnown RBP27.66■■■□□ 2.02
LINC01558-201ENST00000366822 ATP10BO94823 1461 aa27.65■■■□□ 2.02
LINC01558-201ENST00000366822 ABCC10Q5T3U5 1492 aa27.65■■■□□ 2.02
LINC01558-201ENST00000366822 CCDC18Q5T9S5 1454 aa27.63■■■□□ 2.01
LINC01558-201ENST00000366822 ARID3CA6NKF2 412 aa27.62■■■□□ 2.01
LINC01558-201ENST00000366822 LRRIQ1Q96JM4 1722 aa27.6■■■□□ 2.01
LINC01558-201ENST00000366822 CDK13Q14004 1512 aaKnown RBP27.6■■■□□ 2.01
LINC01558-201ENST00000366822 MAP3K1Q13233 1512 aa27.57■■■□□ 2
LINC01558-201ENST00000366822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
LINC01558-201ENST00000366822 HNRNPUL2Q1KMD3 747 aaKnown RBP27.55■■■□□ 2
LINC01558-201ENST00000366822 ASXL2Q76L83 1435 aa27.54■■■□□ 2
LINC01558-201ENST00000366822 TSPOAP1O95153 1857 aa27.53■■■□□ 2
LINC01558-201ENST00000366822 TIAM1Q13009 1591 aa27.52■■■□□ 2
LINC01558-201ENST00000366822 APLP2Q06481 763 aa27.52■■■□□ 2
LINC01558-201ENST00000366822 CFAP43Q8NDM7 1665 aa27.51■■□□□ 1.99
LINC01558-201ENST00000366822 GLI2P10070 1586 aa27.49■■□□□ 1.99
LINC01558-201ENST00000366822 FAM69CQ0P6D2 419 aa27.49■■□□□ 1.99
LINC01558-201ENST00000366822 CDK11AQ9UQ88 783 aaPredicted RBP27.49■■□□□ 1.99
LINC01558-201ENST00000366822 PLEKHD1A6NEE1 506 aa27.46■■□□□ 1.99
LINC01558-201ENST00000366822 PPRC1Q5VV67 1664 aaKnown RBP27.44■■□□□ 1.98
LINC01558-201ENST00000366822 MAGI3Q5TCQ9 1506 aa27.44■■□□□ 1.98
LINC01558-201ENST00000366822 MAP3K4Q9Y6R4 1608 aa27.42■■□□□ 1.98
LINC01558-201ENST00000366822 LRRC9Q6ZRR7 1453 aa27.42■■□□□ 1.98
LINC01558-201ENST00000366822 WDR7Q9Y4E6 1490 aa27.42■■□□□ 1.98
LINC01558-201ENST00000366822 TROQ12816 1431 aaPredicted RBP27.41■■□□□ 1.98
LINC01558-201ENST00000366822 KANK4Q5T7N3 995 aaPredicted RBP27.41■■□□□ 1.98
LINC01558-201ENST00000366822 MTUS2Q5JR59 1369 aa27.39■■□□□ 1.98
LINC01558-201ENST00000366822 EHBP1L1Q8N3D4 1523 aa27.38■■□□□ 1.97
LINC01558-201ENST00000366822 KCNH8Q96L42 1107 aa27.3■■□□□ 1.96
LINC01558-201ENST00000366822 KDM6BO15054 1643 aa27.3■■□□□ 1.96
LINC01558-201ENST00000366822 KIF14Q15058 1648 aa27.27■■□□□ 1.96
LINC01558-201ENST00000366822 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
LINC01558-201ENST00000366822 SUPT6HQ7KZ85 1726 aaKnown RBP27.23■■□□□ 1.95
LINC01558-201ENST00000366822 NCOA2Q15596 1464 aa27.23■■□□□ 1.95
LINC01558-201ENST00000366822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.22■■□□□ 1.95
LINC01558-201ENST00000366822 ABCA9Q8IUA7 1624 aa27.2■■□□□ 1.95
LINC01558-201ENST00000366822 TEX14Q8IWB6 1497 aa27.19■■□□□ 1.94
LINC01558-201ENST00000366822 TTC37Q6PGP7 1564 aa27.17■■□□□ 1.94
LINC01558-201ENST00000366822 CCNB3Q8WWL7 1395 aa27.12■■□□□ 1.93
LINC01558-201ENST00000366822 AEBP2Q6ZN18 517 aaPredicted RBP27.12■■□□□ 1.93
LINC01558-201ENST00000366822 GPATCH8Q9UKJ3 1502 aaKnown RBP27.11■■□□□ 1.93
LINC01558-201ENST00000366822 PHLDB1Q86UU1 1377 aa27.11■■□□□ 1.93
LINC01558-201ENST00000366822 CD109Q6YHK3 1445 aa27.09■■□□□ 1.93
LINC01558-201ENST00000366822 PLCH2O75038 1416 aa27.08■■□□□ 1.93
LINC01558-201ENST00000366822 MYOM3Q5VTT5 1437 aa27.07■■□□□ 1.92
LINC01558-201ENST00000366822 ARAP3Q8WWN8 1544 aa27.05■■□□□ 1.92
LINC01558-201ENST00000366822 CDC42BPAQ5VT25 1732 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms