RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 CHMP7Q8WUX9 453 aaPredicted RBP19.61■□□□□ 0.73
CAPN9-203ENST00000366666 CHD1O14646 1710 aa19.61■□□□□ 0.73
CAPN9-203ENST00000366666 CEP170Q5SW79 1584 aa19.56■□□□□ 0.72
CAPN9-203ENST00000366666 CLIP1P30622 1438 aa19.54■□□□□ 0.72
CAPN9-203ENST00000366666 NUP160Q12769 1436 aa19.49■□□□□ 0.71
CAPN9-203ENST00000366666 IQGAP2Q13576 1575 aa19.48■□□□□ 0.71
CAPN9-203ENST00000366666 ARHGAP35Q9NRY4 1499 aa19.47■□□□□ 0.71
CAPN9-203ENST00000366666 KIAA0586Q9BVV6 1533 aa19.45■□□□□ 0.7
CAPN9-203ENST00000366666 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
CAPN9-203ENST00000366666 ARAP1Q96P48 1450 aa19.43■□□□□ 0.7
CAPN9-203ENST00000366666 SAMD9Q5K651 1589 aa19.39■□□□□ 0.69
CAPN9-203ENST00000366666 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
CAPN9-203ENST00000366666 UGGT2Q9NYU1 1516 aa19.36■□□□□ 0.69
CAPN9-203ENST00000366666 EFCAB5A4FU69 1503 aa19.34■□□□□ 0.69
CAPN9-203ENST00000366666 DISP1Q96F81 1524 aa19.33■□□□□ 0.68
CAPN9-203ENST00000366666 JPH4Q96JJ6 628 aa19.33■□□□□ 0.68
CAPN9-203ENST00000366666 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
CAPN9-203ENST00000366666 VPS8Q8N3P4 1428 aa19.31■□□□□ 0.68
CAPN9-203ENST00000366666 KIAA0556O60303 1618 aa19.29■□□□□ 0.68
CAPN9-203ENST00000366666 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
CAPN9-203ENST00000366666 ERCC6L2Q5T890 1561 aa19.26■□□□□ 0.67
CAPN9-203ENST00000366666 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
CAPN9-203ENST00000366666 PRG4Q92954 1404 aaPredicted RBP19.24■□□□□ 0.67
CAPN9-203ENST00000366666 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
CAPN9-203ENST00000366666 PPARGC1BQ86YN6 1023 aaKnown RBP19.23■□□□□ 0.67
CAPN9-203ENST00000366666 PCF11O94913 1555 aaKnown RBP19.22■□□□□ 0.67
CAPN9-203ENST00000366666 CARMIL2Q6F5E8 1435 aa19.18■□□□□ 0.66
CAPN9-203ENST00000366666 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
CAPN9-203ENST00000366666 LRRIQ1Q96JM4 1722 aa19.16■□□□□ 0.66
CAPN9-203ENST00000366666 ATP1B4Q9UN42 357 aaPredicted RBP19.15■□□□□ 0.66
CAPN9-203ENST00000366666 CASKIN1Q8WXD9 1431 aa19.12■□□□□ 0.65
CAPN9-203ENST00000366666 PLB1Q6P1J6 1458 aa19.1■□□□□ 0.65
CAPN9-203ENST00000366666 FYCO1Q9BQS8 1478 aa19.1■□□□□ 0.65
CAPN9-203ENST00000366666 RAPGEF6Q8TEU7 1601 aa19.07■□□□□ 0.64
CAPN9-203ENST00000366666 ARID3CA6NKF2 412 aa19.07■□□□□ 0.64
CAPN9-203ENST00000366666 KANK4Q5T7N3 995 aaPredicted RBP19.07■□□□□ 0.64
CAPN9-203ENST00000366666 PTPRGP23470 1445 aa19.06■□□□□ 0.64
CAPN9-203ENST00000366666 TIAM1Q13009 1591 aa19.05■□□□□ 0.64
CAPN9-203ENST00000366666 APLP2Q06481 763 aa19.04■□□□□ 0.64
CAPN9-203ENST00000366666 CFAP43Q8NDM7 1665 aa19.04■□□□□ 0.64
CAPN9-203ENST00000366666 ABCA8O94911 1581 aa19.03■□□□□ 0.64
CAPN9-203ENST00000366666 HECW1Q76N89 1606 aa19.03■□□□□ 0.64
CAPN9-203ENST00000366666 NUP153P49790 1475 aaKnown RBP19.03■□□□□ 0.64
CAPN9-203ENST00000366666 CDK13Q14004 1512 aaKnown RBP19.02■□□□□ 0.64
CAPN9-203ENST00000366666 HRCP23327 699 aa19■□□□□ 0.63
CAPN9-203ENST00000366666 EPRSP07814 1512 aaKnown RBP19■□□□□ 0.63
CAPN9-203ENST00000366666 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
CAPN9-203ENST00000366666 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
CAPN9-203ENST00000366666 MAGI3Q5TCQ9 1506 aa18.96■□□□□ 0.63
CAPN9-203ENST00000366666 LRRC9Q6ZRR7 1453 aa18.95■□□□□ 0.62
CAPN9-203ENST00000366666 UACAQ9BZF9 1416 aa18.95■□□□□ 0.62
CAPN9-203ENST00000366666 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
CAPN9-203ENST00000366666 RIMBP3CA6NJZ7 1639 aa18.93■□□□□ 0.62
CAPN9-203ENST00000366666 RIMBP3BA6NNM3 1639 aa18.93■□□□□ 0.62
CAPN9-203ENST00000366666 RIMBP3Q9UFD9 1639 aa18.93■□□□□ 0.62
CAPN9-203ENST00000366666 ABCC2Q92887 1545 aa18.91■□□□□ 0.62
CAPN9-203ENST00000366666 ATP10BO94823 1461 aa18.91■□□□□ 0.62
CAPN9-203ENST00000366666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
CAPN9-203ENST00000366666 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
CAPN9-203ENST00000366666 ADCY10Q96PN6 1610 aa18.9■□□□□ 0.62
CAPN9-203ENST00000366666 MTUS2Q5JR59 1369 aa18.86■□□□□ 0.61
CAPN9-203ENST00000366666 UHRF1BP1LA0JNW5 1464 aa18.85■□□□□ 0.61
CAPN9-203ENST00000366666 ZCCHC11Q5TAX3 1644 aaKnown RBP18.84■□□□□ 0.61
CAPN9-203ENST00000366666 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.6
CAPN9-203ENST00000366666 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
CAPN9-203ENST00000366666 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
CAPN9-203ENST00000366666 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
CAPN9-203ENST00000366666 KDM5BQ9UGL1 1544 aa18.81■□□□□ 0.6
CAPN9-203ENST00000366666 PHLDB1Q86UU1 1377 aa18.8■□□□□ 0.6
CAPN9-203ENST00000366666 SUPT6HQ7KZ85 1726 aaKnown RBP18.79■□□□□ 0.6
CAPN9-203ENST00000366666 KIF14Q15058 1648 aa18.78■□□□□ 0.6
CAPN9-203ENST00000366666 NCOA2Q15596 1464 aa18.78■□□□□ 0.6
CAPN9-203ENST00000366666 TROQ12816 1431 aaPredicted RBP18.77■□□□□ 0.59
CAPN9-203ENST00000366666 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
CAPN9-203ENST00000366666 PLEKHD1A6NEE1 506 aa18.75■□□□□ 0.59
CAPN9-203ENST00000366666 RRBP1Q9P2E9 1410 aaKnown RBP18.68■□□□□ 0.58
CAPN9-203ENST00000366666 PELP1Q8IZL8 1130 aaKnown RBP18.68■□□□□ 0.58
CAPN9-203ENST00000366666 KCNH8Q96L42 1107 aa18.68■□□□□ 0.58
CAPN9-203ENST00000366666 MYOM3Q5VTT5 1437 aa18.67■□□□□ 0.58
CAPN9-203ENST00000366666 ASXL2Q76L83 1435 aa18.66■□□□□ 0.58
CAPN9-203ENST00000366666 ABCC10Q5T3U5 1492 aa18.65■□□□□ 0.58
CAPN9-203ENST00000366666 FGD6Q6ZV73 1430 aa18.65■□□□□ 0.58
CAPN9-203ENST00000366666 TTC37Q6PGP7 1564 aa18.65■□□□□ 0.58
CAPN9-203ENST00000366666 CCNB3Q8WWL7 1395 aa18.64■□□□□ 0.58
CAPN9-203ENST00000366666 CDC42BPAQ5VT25 1732 aa18.64■□□□□ 0.58
CAPN9-203ENST00000366666 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.63■□□□□ 0.57
CAPN9-203ENST00000366666 WDR7Q9Y4E6 1490 aa18.63■□□□□ 0.57
CAPN9-203ENST00000366666 NPM1P06748 294 aaKnown RBP eCLIP18.63■□□□□ 0.57
CAPN9-203ENST00000366666 GPATCH8Q9UKJ3 1502 aaKnown RBP18.62■□□□□ 0.57
CAPN9-203ENST00000366666 FAM50AQ14320 339 aaKnown RBP18.6■□□□□ 0.57
CAPN9-203ENST00000366666 PTPN23Q9H3S7 1636 aa18.6■□□□□ 0.57
CAPN9-203ENST00000366666 CDC42BPBQ9Y5S2 1711 aa18.59■□□□□ 0.57
CAPN9-203ENST00000366666 ZNF644Q9H582 1327 aaPredicted RBP18.58■□□□□ 0.57
CAPN9-203ENST00000366666 ITSN2Q9NZM3 1697 aa18.58■□□□□ 0.56
CAPN9-203ENST00000366666 ITGAEP38570 1179 aa18.57■□□□□ 0.56
CAPN9-203ENST00000366666 DNAJC5Q9H3Z4 198 aa18.57■□□□□ 0.56
CAPN9-203ENST00000366666 PREX2Q70Z35 1606 aa18.55■□□□□ 0.56
CAPN9-203ENST00000366666 MAPKBP1O60336 1514 aa18.55■□□□□ 0.56
CAPN9-203ENST00000366666 MYO5CQ9NQX4 1742 aa18.54■□□□□ 0.56
CAPN9-203ENST00000366666 MIA2Q96PC5 1412 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms