RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 CHD1O14646 1710 aa10.64□□□□□ -0.71
VTRNA3-1P-201ENST00000362552 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
VTRNA3-1P-201ENST00000362552 KIF21BO75037 1637 aa10.63□□□□□ -0.71
VTRNA3-1P-201ENST00000362552 DNAJC5Q9H3Z4 198 aa10.6□□□□□ -0.71
VTRNA3-1P-201ENST00000362552 TNIKQ9UKE5 1360 aa10.59□□□□□ -0.71
VTRNA3-1P-201ENST00000362552 CEP170Q5SW79 1584 aa10.59□□□□□ -0.71
VTRNA3-1P-201ENST00000362552 CARMIL2Q6F5E8 1435 aa10.58□□□□□ -0.72
VTRNA3-1P-201ENST00000362552 PRG4Q92954 1404 aaPredicted RBP10.57□□□□□ -0.72
VTRNA3-1P-201ENST00000362552 P3H3Q8IVL6 736 aa10.56□□□□□ -0.72
VTRNA3-1P-201ENST00000362552 IQGAP2Q13576 1575 aa10.56□□□□□ -0.72
VTRNA3-1P-201ENST00000362552 TTBK1Q5TCY1 1321 aaPredicted RBP10.56□□□□□ -0.72
VTRNA3-1P-201ENST00000362552 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
VTRNA3-1P-201ENST00000362552 CYB5RLQ6IPT4 315 aa10.52□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 UGGT2Q9NYU1 1516 aa10.51□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 PTPRGP23470 1445 aa10.5□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 CLIP1P30622 1438 aa10.49□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 ATP1B4Q9UN42 357 aaPredicted RBP10.48□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 ARHGEF11O15085 1522 aa10.48□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 CEP162Q5TB80 1403 aa10.47□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
VTRNA3-1P-201ENST00000362552 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 DISP1Q96F81 1524 aa10.46□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.44□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 HNRNPUL2Q1KMD3 747 aaKnown RBP10.44□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 FHOD3Q2V2M9 1422 aa10.43□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 RIMBP3CA6NJZ7 1639 aa10.43□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 RIMBP3BA6NNM3 1639 aa10.43□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 KIAA0556O60303 1618 aa10.43□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 RIMBP3Q9UFD9 1639 aa10.43□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 ARHGAP35Q9NRY4 1499 aa10.42□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 FMN1Q68DA7 1419 aa10.42□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 APLP2Q06481 763 aa10.42□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 ERCC6L2Q5T890 1561 aa10.42□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 UACAQ9BZF9 1416 aa10.41□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 SAMD9Q5K651 1589 aa10.4□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 ARAP1Q96P48 1450 aa10.4□□□□□ -0.74
VTRNA3-1P-201ENST00000362552 CDK11AQ9UQ88 783 aaPredicted RBP10.38□□□□□ -0.75
VTRNA3-1P-201ENST00000362552 ARID3CA6NKF2 412 aa10.37□□□□□ -0.75
VTRNA3-1P-201ENST00000362552 PLB1Q6P1J6 1458 aa10.36□□□□□ -0.75
VTRNA3-1P-201ENST00000362552 PLEKHD1A6NEE1 506 aa10.35□□□□□ -0.75
VTRNA3-1P-201ENST00000362552 UHRF1BP1LA0JNW5 1464 aa10.34□□□□□ -0.75
VTRNA3-1P-201ENST00000362552 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 ABCC2Q92887 1545 aa10.32□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 ABCA8O94911 1581 aa10.31□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 KCNH8Q96L42 1107 aa10.31□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 RAPGEF6Q8TEU7 1601 aa10.3□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 ATP10BO94823 1461 aa10.3□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 FYCO1Q9BQS8 1478 aa10.29□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 KDM5BQ9UGL1 1544 aa10.28□□□□□ -0.76
VTRNA3-1P-201ENST00000362552 HECW1Q76N89 1606 aa10.27□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 NUP153P49790 1475 aaKnown RBP10.27□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 CCDC18Q5T9S5 1454 aa10.27□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 EPRSP07814 1512 aaKnown RBP10.27□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 ADCY10Q96PN6 1610 aa10.26□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 MTUS2Q5JR59 1369 aa10.26□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 FAM69CQ0P6D2 419 aa10.25□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 ASXL2Q76L83 1435 aa10.24□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 PCF11O94913 1555 aaKnown RBP10.24□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 CDK13Q14004 1512 aaKnown RBP10.22□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
VTRNA3-1P-201ENST00000362552 WDR7Q9Y4E6 1490 aa10.21□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 MAPKBP1O60336 1514 aa10.2□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 TROQ12816 1431 aaPredicted RBP10.2□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 MAP3K1Q13233 1512 aa10.2□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 KANK4Q5T7N3 995 aaPredicted RBP10.2□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 PPARGC1BQ86YN6 1023 aaKnown RBP10.19□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 ABCC10Q5T3U5 1492 aa10.17□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 LRRC9Q6ZRR7 1453 aa10.17□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 EFCAB2Q5VUJ9 269 aa10.16□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 CD109Q6YHK3 1445 aa10.16□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 CCNB3Q8WWL7 1395 aa10.15□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 CFDP1Q9UEE9 299 aaPredicted RBP10.15□□□□□ -0.78
VTRNA3-1P-201ENST00000362552 ZNF777Q9ULD5 760 aaPredicted RBP10.14□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 EHBP1L1Q8N3D4 1523 aa10.13□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 KIF14Q15058 1648 aa10.11□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 GLI2P10070 1586 aa10.11□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 LRRIQ1Q96JM4 1722 aa10.1□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 PLCH2O75038 1416 aa10.1□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 CFAP43Q8NDM7 1665 aa10.1□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 MAGI3Q5TCQ9 1506 aa10.1□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 PHLDB1Q86UU1 1377 aa10.1□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 NCOA2Q15596 1464 aa10.1□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.09□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 TEX14Q8IWB6 1497 aa10.09□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 DIP2BQ9P265 1576 aa10.09□□□□□ -0.79
VTRNA3-1P-201ENST00000362552 SUPT6HQ7KZ85 1726 aaKnown RBP10.08□□□□□ -0.8
VTRNA3-1P-201ENST00000362552 FAM50AQ14320 339 aaKnown RBP10.08□□□□□ -0.8
VTRNA3-1P-201ENST00000362552 RSPH4AQ5TD94 716 aa10.08□□□□□ -0.8
VTRNA3-1P-201ENST00000362552 MYT1LQ9UL68 1186 aa10.08□□□□□ -0.8
VTRNA3-1P-201ENST00000362552 GPATCH8Q9UKJ3 1502 aaKnown RBP10.07□□□□□ -0.8
VTRNA3-1P-201ENST00000362552 ABCA9Q8IUA7 1624 aa10.06□□□□□ -0.8
VTRNA3-1P-201ENST00000362552 ARHGAP5Q13017 1502 aa10.06□□□□□ -0.8
VTRNA3-1P-201ENST00000362552 TSPY4P0CV99 314 aa10.05□□□□□ -0.8
VTRNA3-1P-201ENST00000362552 TSPY10P0CW01 314 aa10.05□□□□□ -0.8
VTRNA3-1P-201ENST00000362552 MYOM3Q5VTT5 1437 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms