RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 RANGAP1P46060 587 aaPredicted RBP17.5■□□□□ 0.39
SNX6-201ENST00000362031 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
SNX6-201ENST00000362031 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
SNX6-201ENST00000362031 KIAA0586Q9BVV6 1533 aa17.45■□□□□ 0.38
SNX6-201ENST00000362031 CTTNBP2Q8WZ74 1663 aa17.45■□□□□ 0.38
SNX6-201ENST00000362031 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
SNX6-201ENST00000362031 IQGAP2Q13576 1575 aa17.41■□□□□ 0.38
SNX6-201ENST00000362031 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
SNX6-201ENST00000362031 CEP162Q5TB80 1403 aa17.39■□□□□ 0.37
SNX6-201ENST00000362031 P3H3Q8IVL6 736 aa17.35■□□□□ 0.37
SNX6-201ENST00000362031 ERCC6L2Q5T890 1561 aa17.34■□□□□ 0.37
SNX6-201ENST00000362031 UGGT2Q9NYU1 1516 aa17.33■□□□□ 0.37
SNX6-201ENST00000362031 CLIP1P30622 1438 aa17.33■□□□□ 0.37
SNX6-201ENST00000362031 DISP1Q96F81 1524 aa17.33■□□□□ 0.36
SNX6-201ENST00000362031 ARHGAP35Q9NRY4 1499 aa17.33■□□□□ 0.36
SNX6-201ENST00000362031 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
SNX6-201ENST00000362031 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
SNX6-201ENST00000362031 SAMD9Q5K651 1589 aa17.29■□□□□ 0.36
SNX6-201ENST00000362031 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
SNX6-201ENST00000362031 FHOD3Q2V2M9 1422 aa17.28■□□□□ 0.36
SNX6-201ENST00000362031 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
SNX6-201ENST00000362031 TTBK1Q5TCY1 1321 aaPredicted RBP17.25■□□□□ 0.35
SNX6-201ENST00000362031 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
SNX6-201ENST00000362031 CARMIL2Q6F5E8 1435 aa17.2■□□□□ 0.34
SNX6-201ENST00000362031 ARHGEF11O15085 1522 aa17.19■□□□□ 0.34
SNX6-201ENST00000362031 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
SNX6-201ENST00000362031 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
SNX6-201ENST00000362031 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
SNX6-201ENST00000362031 PTPRGP23470 1445 aa17.14■□□□□ 0.33
SNX6-201ENST00000362031 PLB1Q6P1J6 1458 aa17.12■□□□□ 0.33
SNX6-201ENST00000362031 VPS8Q8N3P4 1428 aa17.11■□□□□ 0.33
SNX6-201ENST00000362031 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
SNX6-201ENST00000362031 FMN1Q68DA7 1419 aa17.08■□□□□ 0.32
SNX6-201ENST00000362031 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
SNX6-201ENST00000362031 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
SNX6-201ENST00000362031 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
SNX6-201ENST00000362031 ATP1B4Q9UN42 357 aaPredicted RBP17.05■□□□□ 0.32
SNX6-201ENST00000362031 ABCA8O94911 1581 aa17.05■□□□□ 0.32
SNX6-201ENST00000362031 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
SNX6-201ENST00000362031 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
SNX6-201ENST00000362031 NUP153P49790 1475 aaKnown RBP17.02■□□□□ 0.32
SNX6-201ENST00000362031 RAPGEF6Q8TEU7 1601 aa17.02■□□□□ 0.32
SNX6-201ENST00000362031 LRRIQ1Q96JM4 1722 aa17.01■□□□□ 0.31
SNX6-201ENST00000362031 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
SNX6-201ENST00000362031 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
SNX6-201ENST00000362031 CDK13Q14004 1512 aaKnown RBP16.98■□□□□ 0.31
SNX6-201ENST00000362031 ABCC2Q92887 1545 aa16.98■□□□□ 0.31
SNX6-201ENST00000362031 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
SNX6-201ENST00000362031 EPRSP07814 1512 aaKnown RBP16.96■□□□□ 0.3
SNX6-201ENST00000362031 UHRF1BP1LA0JNW5 1464 aa16.95■□□□□ 0.3
SNX6-201ENST00000362031 ATP10BO94823 1461 aa16.95■□□□□ 0.3
SNX6-201ENST00000362031 HECW1Q76N89 1606 aa16.94■□□□□ 0.3
SNX6-201ENST00000362031 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
SNX6-201ENST00000362031 KDM5BQ9UGL1 1544 aa16.9■□□□□ 0.3
SNX6-201ENST00000362031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.9■□□□□ 0.3
SNX6-201ENST00000362031 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
SNX6-201ENST00000362031 MAGI3Q5TCQ9 1506 aa16.9■□□□□ 0.3
SNX6-201ENST00000362031 TIAM1Q13009 1591 aa16.89■□□□□ 0.29
SNX6-201ENST00000362031 ZCCHC11Q5TAX3 1644 aaKnown RBP16.89■□□□□ 0.29
SNX6-201ENST00000362031 CCDC18Q5T9S5 1454 aa16.86■□□□□ 0.29
SNX6-201ENST00000362031 CFAP43Q8NDM7 1665 aa16.86■□□□□ 0.29
SNX6-201ENST00000362031 APLP2Q06481 763 aa16.85■□□□□ 0.29
SNX6-201ENST00000362031 MAP3K1Q13233 1512 aa16.84■□□□□ 0.29
SNX6-201ENST00000362031 LRRC9Q6ZRR7 1453 aa16.83■□□□□ 0.29
SNX6-201ENST00000362031 ASXL2Q76L83 1435 aa16.8■□□□□ 0.28
SNX6-201ENST00000362031 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNX6-201ENST00000362031 PLEKHD1A6NEE1 506 aa16.79■□□□□ 0.28
SNX6-201ENST00000362031 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
SNX6-201ENST00000362031 KCNH8Q96L42 1107 aa16.78■□□□□ 0.28
SNX6-201ENST00000362031 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.28
SNX6-201ENST00000362031 KIF14Q15058 1648 aa16.76■□□□□ 0.27
SNX6-201ENST00000362031 CDK11AQ9UQ88 783 aaPredicted RBP16.76■□□□□ 0.27
SNX6-201ENST00000362031 WDR7Q9Y4E6 1490 aa16.75■□□□□ 0.27
SNX6-201ENST00000362031 EHBP1L1Q8N3D4 1523 aa16.73■□□□□ 0.27
SNX6-201ENST00000362031 MAPKBP1O60336 1514 aa16.73■□□□□ 0.27
SNX6-201ENST00000362031 PHLDB1Q86UU1 1377 aa16.71■□□□□ 0.27
SNX6-201ENST00000362031 NCOA2Q15596 1464 aa16.71■□□□□ 0.27
SNX6-201ENST00000362031 ABCC10Q5T3U5 1492 aa16.69■□□□□ 0.26
SNX6-201ENST00000362031 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.68■□□□□ 0.26
SNX6-201ENST00000362031 TTC37Q6PGP7 1564 aa16.68■□□□□ 0.26
SNX6-201ENST00000362031 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
SNX6-201ENST00000362031 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
SNX6-201ENST00000362031 FAM69CQ0P6D2 419 aa16.63■□□□□ 0.25
SNX6-201ENST00000362031 DIP2BQ9P265 1576 aa16.63■□□□□ 0.25
SNX6-201ENST00000362031 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
SNX6-201ENST00000362031 ABCA9Q8IUA7 1624 aa16.6■□□□□ 0.25
SNX6-201ENST00000362031 CDC42BPAQ5VT25 1732 aa16.6■□□□□ 0.25
SNX6-201ENST00000362031 MYOM3Q5VTT5 1437 aa16.6■□□□□ 0.25
SNX6-201ENST00000362031 ZNF644Q9H582 1327 aaPredicted RBP16.59■□□□□ 0.25
SNX6-201ENST00000362031 KIF13AQ9H1H9 1805 aa16.59■□□□□ 0.25
SNX6-201ENST00000362031 CDC42BPBQ9Y5S2 1711 aa16.57■□□□□ 0.24
SNX6-201ENST00000362031 GLI2P10070 1586 aa16.57■□□□□ 0.24
SNX6-201ENST00000362031 CD109Q6YHK3 1445 aa16.56■□□□□ 0.24
SNX6-201ENST00000362031 FGD6Q6ZV73 1430 aa16.56■□□□□ 0.24
SNX6-201ENST00000362031 PLCH2O75038 1416 aa16.56■□□□□ 0.24
SNX6-201ENST00000362031 CFDP1Q9UEE9 299 aaPredicted RBP16.55■□□□□ 0.24
SNX6-201ENST00000362031 MAP3K4Q9Y6R4 1608 aa16.54■□□□□ 0.24
SNX6-201ENST00000362031 ZNF777Q9ULD5 760 aaPredicted RBP16.54■□□□□ 0.24
SNX6-201ENST00000362031 PREX2Q70Z35 1606 aa16.54■□□□□ 0.24
SNX6-201ENST00000362031 MYO5CQ9NQX4 1742 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms