RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CENPBP07199 599 aaPredicted RBP15.89■□□□□ 0.13
SMC3-201ENST00000361804 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
SMC3-201ENST00000361804 MIER1Q8N108 512 aa15.88■□□□□ 0.13
SMC3-201ENST00000361804 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
SMC3-201ENST00000361804 PCF11O94913 1555 aaKnown RBP15.84■□□□□ 0.13
SMC3-201ENST00000361804 CUL7Q14999 1698 aa15.84■□□□□ 0.13
SMC3-201ENST00000361804 TIAM1Q13009 1591 aa15.81■□□□□ 0.12
SMC3-201ENST00000361804 PBRM1Q86U86 1689 aa15.81■□□□□ 0.12
SMC3-201ENST00000361804 SAMD9Q5K651 1589 aa15.81■□□□□ 0.12
SMC3-201ENST00000361804 CARMIL1Q5VZK9 1371 aa15.79■□□□□ 0.12
SMC3-201ENST00000361804 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
SMC3-201ENST00000361804 APLP2Q06481 763 aa15.77■□□□□ 0.11
SMC3-201ENST00000361804 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
SMC3-201ENST00000361804 MAP3K1Q13233 1512 aa15.74■□□□□ 0.11
SMC3-201ENST00000361804 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
SMC3-201ENST00000361804 LRRC9Q6ZRR7 1453 aa15.66■□□□□ 0.1
SMC3-201ENST00000361804 ITGAEP38570 1179 aa15.66■□□□□ 0.1
SMC3-201ENST00000361804 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
SMC3-201ENST00000361804 ADAMTS12P58397 1594 aa15.66■□□□□ 0.1
SMC3-201ENST00000361804 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
SMC3-201ENST00000361804 WDR62O43379 1518 aa15.65■□□□□ 0.1
SMC3-201ENST00000361804 FHOD3Q2V2M9 1422 aa15.65■□□□□ 0.1
SMC3-201ENST00000361804 PHLDB1Q86UU1 1377 aa15.64■□□□□ 0.09
SMC3-201ENST00000361804 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
SMC3-201ENST00000361804 EFCAB5A4FU69 1503 aa15.63■□□□□ 0.09
SMC3-201ENST00000361804 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
SMC3-201ENST00000361804 ZNF608Q9ULD9 1512 aaPredicted RBP15.63■□□□□ 0.09
SMC3-201ENST00000361804 DHX57Q6P158 1386 aaKnown RBP15.61■□□□□ 0.09
SMC3-201ENST00000361804 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.091e-6■■■■□ 22.8
SMC3-201ENST00000361804 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
SMC3-201ENST00000361804 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
SMC3-201ENST00000361804 FYCO1Q9BQS8 1478 aa15.58■□□□□ 0.08
SMC3-201ENST00000361804 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
SMC3-201ENST00000361804 EIF4G3O43432 1585 aaKnown RBP15.56■□□□□ 0.08
SMC3-201ENST00000361804 CASKIN1Q8WXD9 1431 aa15.55■□□□□ 0.08
SMC3-201ENST00000361804 MRC2Q9UBG0 1479 aa15.55■□□□□ 0.08
SMC3-201ENST00000361804 PTPRKQ15262 1439 aa15.51■□□□□ 0.07
SMC3-201ENST00000361804 CCNB3Q8WWL7 1395 aa15.51■□□□□ 0.07
SMC3-201ENST00000361804 KCNH8Q96L42 1107 aa15.49■□□□□ 0.07
SMC3-201ENST00000361804 DISP1Q96F81 1524 aa15.47■□□□□ 0.07
SMC3-201ENST00000361804 IQGAP2Q13576 1575 aa15.46■□□□□ 0.07
SMC3-201ENST00000361804 P3H3Q8IVL6 736 aa15.46■□□□□ 0.07
SMC3-201ENST00000361804 DENND4BO75064 1496 aaPredicted RBP15.45■□□□□ 0.06
SMC3-201ENST00000361804 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
SMC3-201ENST00000361804 KDM6BO15054 1643 aa15.44■□□□□ 0.06
SMC3-201ENST00000361804 UGGT2Q9NYU1 1516 aa15.43■□□□□ 0.06
SMC3-201ENST00000361804 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
SMC3-201ENST00000361804 KDM5BQ9UGL1 1544 aa15.41■□□□□ 0.06
SMC3-201ENST00000361804 KIAA0556O60303 1618 aa15.41■□□□□ 0.06
SMC3-201ENST00000361804 RAB3GAP2Q9H2M9 1393 aa15.39■□□□□ 0.05
SMC3-201ENST00000361804 ATP1B4Q9UN42 357 aaPredicted RBP15.39■□□□□ 0.05
SMC3-201ENST00000361804 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
SMC3-201ENST00000361804 IFT140Q96RY7 1462 aa15.38■□□□□ 0.05
SMC3-201ENST00000361804 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
SMC3-201ENST00000361804 SUPT16HQ9Y5B9 1047 aaKnown RBP15.36■□□□□ 0.05
SMC3-201ENST00000361804 SIN3AQ96ST3 1273 aa15.36■□□□□ 0.05
SMC3-201ENST00000361804 SUPT6HQ7KZ85 1726 aaKnown RBP15.35■□□□□ 0.05
SMC3-201ENST00000361804 PTPN23Q9H3S7 1636 aa15.34■□□□□ 0.05
SMC3-201ENST00000361804 NCOA2Q15596 1464 aa15.34■□□□□ 0.05
SMC3-201ENST00000361804 FGD6Q6ZV73 1430 aa15.34■□□□□ 0.05
SMC3-201ENST00000361804 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
SMC3-201ENST00000361804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.04
SMC3-201ENST00000361804 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
SMC3-201ENST00000361804 FAM50AQ14320 339 aaKnown RBP15.33■□□□□ 0.04
SMC3-201ENST00000361804 EPRSP07814 1512 aaKnown RBP15.32■□□□□ 0.04
SMC3-201ENST00000361804 GCC2Q8IWJ2 1684 aa15.32■□□□□ 0.04
SMC3-201ENST00000361804 EHBP1L1Q8N3D4 1523 aa15.31■□□□□ 0.04
SMC3-201ENST00000361804 NUP153P49790 1475 aaKnown RBP15.31■□□□□ 0.04
SMC3-201ENST00000361804 BCANQ96GW7 911 aa15.31■□□□□ 0.04
SMC3-201ENST00000361804 HECW1Q76N89 1606 aa15.31■□□□□ 0.04
SMC3-201ENST00000361804 CLSPNQ9HAW4 1339 aa15.3■□□□□ 0.04
SMC3-201ENST00000361804 TCOF1Q13428 1488 aaKnown RBP15.3■□□□□ 0.04
SMC3-201ENST00000361804 DDX10Q13206 875 aaKnown RBP15.28■□□□□ 0.04
SMC3-201ENST00000361804 RAPGEF6Q8TEU7 1601 aa15.26■□□□□ 0.03
SMC3-201ENST00000361804 SETD5Q9C0A6 1442 aa15.26■□□□□ 0.03
SMC3-201ENST00000361804 KIAA0586Q9BVV6 1533 aa15.26■□□□□ 0.03
SMC3-201ENST00000361804 KIF14Q15058 1648 aa15.25■□□□□ 0.03
SMC3-201ENST00000361804 NAIPQ13075 1403 aa15.24■□□□□ 0.03
SMC3-201ENST00000361804 MYOM3Q5VTT5 1437 aa15.24■□□□□ 0.03
SMC3-201ENST00000361804 NUP160Q12769 1436 aa15.24■□□□□ 0.03
SMC3-201ENST00000361804 ADCY10Q96PN6 1610 aa15.23■□□□□ 0.03
SMC3-201ENST00000361804 HFM1A2PYH4 1435 aa15.22■□□□□ 0.03
SMC3-201ENST00000361804 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
SMC3-201ENST00000361804 CCDC18Q5T9S5 1454 aa15.2■□□□□ 0.02
SMC3-201ENST00000361804 CHD1O14646 1710 aa15.2■□□□□ 0.02
SMC3-201ENST00000361804 CROCC2H7BZ55 1655 aa15.2■□□□□ 0.02
SMC3-201ENST00000361804 SYNJ2O15056 1496 aa15.19■□□□□ 0.02
SMC3-201ENST00000361804 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
SMC3-201ENST00000361804 PLB1Q6P1J6 1458 aa15.17■□□□□ 0.02
SMC3-201ENST00000361804 ABCA8O94911 1581 aa15.17■□□□□ 0.02
SMC3-201ENST00000361804 TSHZ2Q9NRE2 1034 aa15.17■□□□□ 0.02
SMC3-201ENST00000361804 DNMT1P26358 1616 aaKnown RBP15.16■□□□□ 0.02
SMC3-201ENST00000361804 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
SMC3-201ENST00000361804 TRIM52Q96A61 297 aa15.15■□□□□ 0.02
SMC3-201ENST00000361804 ERCC6L2Q5T890 1561 aa15.13■□□□□ 0.01
SMC3-201ENST00000361804 FKBP8Q14318 412 aa15.12■□□□□ 0.01
SMC3-201ENST00000361804 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
SMC3-201ENST00000361804 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
SMC3-201ENST00000361804 CDC42BPBQ9Y5S2 1711 aa15.08■□□□□ 0
SMC3-201ENST00000361804 PRG4Q92954 1404 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms