RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 GLI2P10070 1586 aa13.08□□□□□ -0.32
CCL28-201ENST00000361115 ABCC10Q5T3U5 1492 aa13.08□□□□□ -0.32
CCL28-201ENST00000361115 DIP2BQ9P265 1576 aa13.05□□□□□ -0.32
CCL28-201ENST00000361115 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.33
CCL28-201ENST00000361115 FBLN2P98095 1184 aa13.02□□□□□ -0.33
CCL28-201ENST00000361115 UHRF1BP1LA0JNW5 1464 aa13□□□□□ -0.33
CCL28-201ENST00000361115 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
CCL28-201ENST00000361115 KDM6BO15054 1643 aa12.97□□□□□ -0.33
CCL28-201ENST00000361115 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
CCL28-201ENST00000361115 ADCY10Q96PN6 1610 aa12.94□□□□□ -0.34
CCL28-201ENST00000361115 PLB1Q6P1J6 1458 aa12.93□□□□□ -0.34
CCL28-201ENST00000361115 PRG4Q92954 1404 aaPredicted RBP12.93□□□□□ -0.34
CCL28-201ENST00000361115 TEX14Q8IWB6 1497 aa12.91□□□□□ -0.34
CCL28-201ENST00000361115 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCL28-201ENST00000361115 CARMIL2Q6F5E8 1435 aa12.86□□□□□ -0.35
CCL28-201ENST00000361115 ABCC2Q92887 1545 aa12.86□□□□□ -0.35
CCL28-201ENST00000361115 MAP3K4Q9Y6R4 1608 aa12.86□□□□□ -0.35
CCL28-201ENST00000361115 HRCP23327 699 aa12.84□□□□□ -0.35
CCL28-201ENST00000361115 PPRC1Q5VV67 1664 aaKnown RBP12.82□□□□□ -0.36
CCL28-201ENST00000361115 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
CCL28-201ENST00000361115 CFAP43Q8NDM7 1665 aa12.81□□□□□ -0.36
CCL28-201ENST00000361115 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
CCL28-201ENST00000361115 TNIKQ9UKE5 1360 aa12.8□□□□□ -0.36
CCL28-201ENST00000361115 UGGT2Q9NYU1 1516 aa12.8□□□□□ -0.36
CCL28-201ENST00000361115 IQGAP2Q13576 1575 aa12.8□□□□□ -0.36
CCL28-201ENST00000361115 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
CCL28-201ENST00000361115 KDM5BQ9UGL1 1544 aa12.79□□□□□ -0.36
CCL28-201ENST00000361115 MAGI3Q5TCQ9 1506 aa12.75□□□□□ -0.37
CCL28-201ENST00000361115 GOLGA3Q08378 1498 aa12.73□□□□□ -0.37
CCL28-201ENST00000361115 PTPRGP23470 1445 aa12.72□□□□□ -0.37
CCL28-201ENST00000361115 UACAQ9BZF9 1416 aa12.71□□□□□ -0.37
CCL28-201ENST00000361115 FAM69CQ0P6D2 419 aa12.71□□□□□ -0.37
CCL28-201ENST00000361115 EPRSP07814 1512 aaKnown RBP12.7□□□□□ -0.38
CCL28-201ENST00000361115 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
CCL28-201ENST00000361115 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
CCL28-201ENST00000361115 ZCCHC11Q5TAX3 1644 aaKnown RBP12.69□□□□□ -0.38
CCL28-201ENST00000361115 KIAA0556O60303 1618 aa12.69□□□□□ -0.38
CCL28-201ENST00000361115 IGF1RP08069 1367 aa12.68□□□□□ -0.38
CCL28-201ENST00000361115 ADGRL1O94910 1474 aa12.68□□□□□ -0.38
CCL28-201ENST00000361115 ASXL2Q76L83 1435 aa12.68□□□□□ -0.38
CCL28-201ENST00000361115 ARAP3Q8WWN8 1544 aa12.66□□□□□ -0.38
CCL28-201ENST00000361115 WDR7Q9Y4E6 1490 aa12.64□□□□□ -0.39
CCL28-201ENST00000361115 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
CCL28-201ENST00000361115 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
CCL28-201ENST00000361115 DISP1Q96F81 1524 aa12.63□□□□□ -0.39
CCL28-201ENST00000361115 PPARGC1BQ86YN6 1023 aaKnown RBP12.62□□□□□ -0.39
CCL28-201ENST00000361115 ABCA8O94911 1581 aa12.62□□□□□ -0.39
CCL28-201ENST00000361115 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
CCL28-201ENST00000361115 RAPGEF2Q9Y4G8 1499 aa12.61□□□□□ -0.39
CCL28-201ENST00000361115 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
CCL28-201ENST00000361115 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
CCL28-201ENST00000361115 NEO1Q92859 1461 aa12.58□□□□□ -0.4
CCL28-201ENST00000361115 ABCA9Q8IUA7 1624 aa12.57□□□□□ -0.4
CCL28-201ENST00000361115 ADAMTSL3P82987 1691 aa12.57□□□□□ -0.4
CCL28-201ENST00000361115 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
CCL28-201ENST00000361115 PLPPR3Q6T4P5 718 aa12.53□□□□□ -0.4
CCL28-201ENST00000361115 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
CCL28-201ENST00000361115 PELP1Q8IZL8 1130 aaKnown RBP12.53□□□□□ -0.4
CCL28-201ENST00000361115 SUPT5HO00267 1087 aaKnown RBP12.5□□□□□ -0.41
CCL28-201ENST00000361115 ZMYM4Q5VZL5 1548 aa12.5□□□□□ -0.41
CCL28-201ENST00000361115 BCORL1Q5H9F3 1711 aa12.49□□□□□ -0.41
CCL28-201ENST00000361115 MAGI2Q86UL8 1455 aa12.48□□□□□ -0.41
CCL28-201ENST00000361115 ARHGEF40Q8TER5 1519 aa12.47□□□□□ -0.41
CCL28-201ENST00000361115 CD109Q6YHK3 1445 aa12.47□□□□□ -0.41
CCL28-201ENST00000361115 SAMD9Q5K651 1589 aa12.47□□□□□ -0.41
CCL28-201ENST00000361115 MYT1Q01538 1121 aa12.46□□□□□ -0.41
CCL28-201ENST00000361115 FBXO41Q8TF61 875 aa12.45□□□□□ -0.42
CCL28-201ENST00000361115 EFCAB5A4FU69 1503 aa12.44□□□□□ -0.42
CCL28-201ENST00000361115 IQSEC2Q5JU85 1478 aa12.44□□□□□ -0.42
CCL28-201ENST00000361115 KIF21BO75037 1637 aa12.42□□□□□ -0.42
CCL28-201ENST00000361115 PCF11O94913 1555 aaKnown RBP12.42□□□□□ -0.42
CCL28-201ENST00000361115 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
CCL28-201ENST00000361115 POGZQ7Z3K3 1410 aa12.42□□□□□ -0.42
CCL28-201ENST00000361115 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
CCL28-201ENST00000361115 EEA1Q15075 1411 aa12.41□□□□□ -0.42
CCL28-201ENST00000361115 PRXQ9BXM0 1461 aa12.41□□□□□ -0.42
CCL28-201ENST00000361115 REREQ9P2R6 1566 aa12.41□□□□□ -0.42
CCL28-201ENST00000361115 RAPGEF6Q8TEU7 1601 aa12.4□□□□□ -0.42
CCL28-201ENST00000361115 FANCAO15360 1455 aa12.39□□□□□ -0.43
CCL28-201ENST00000361115 FHOD3Q2V2M9 1422 aa12.39□□□□□ -0.43
CCL28-201ENST00000361115 TTC37Q6PGP7 1564 aa12.38□□□□□ -0.43
CCL28-201ENST00000361115 PTPRMP28827 1452 aa12.38□□□□□ -0.43
CCL28-201ENST00000361115 RICTORQ6R327 1708 aa12.37□□□□□ -0.43
CCL28-201ENST00000361115 FRMPD1Q5SYB0 1578 aa12.37□□□□□ -0.43
CCL28-201ENST00000361115 PREX1Q8TCU6 1659 aa12.34□□□□□ -0.43
CCL28-201ENST00000361115 AKNAQ7Z591 1439 aa12.34□□□□□ -0.43
CCL28-201ENST00000361115 MADDQ8WXG6 1647 aa12.3□□□□□ -0.44
CCL28-201ENST00000361115 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
CCL28-201ENST00000361115 ATP10BO94823 1461 aa12.3□□□□□ -0.44
CCL28-201ENST00000361115 ZFYVE16Q7Z3T8 1539 aa12.3□□□□□ -0.44
CCL28-201ENST00000361115 LMTK3Q96Q04 1460 aa12.29□□□□□ -0.44
CCL28-201ENST00000361115 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.44
CCL28-201ENST00000361115 FER1L4A9Z1Z3 1794 aa12.27□□□□□ -0.45
CCL28-201ENST00000361115 RIMS1Q86UR5 1692 aaKnown RBP12.26□□□□□ -0.45
CCL28-201ENST00000361115 FAM135AQ9P2D6 1515 aa12.26□□□□□ -0.45
CCL28-201ENST00000361115 MROH2AA6NES4 1674 aa12.25□□□□□ -0.45
CCL28-201ENST00000361115 AGLP35573 1532 aa12.25□□□□□ -0.45
CCL28-201ENST00000361115 KCNA4P22459 653 aa12.24□□□□□ -0.45
CCL28-201ENST00000361115 PTPRTO14522 1441 aa12.23□□□□□ -0.45
CCL28-201ENST00000361115 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms