RNA–Protein interactions for RNA: ENST00000361056.3

MEPE-201, Transcript of matrix extracellular phosphoglycoprotein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MEPE, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEPE-201ENST00000361056 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
MEPE-201ENST00000361056 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
MEPE-201ENST00000361056 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
MEPE-201ENST00000361056 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
MEPE-201ENST00000361056 RNF39Q9H2S5 420 aa12.05□□□□□ -0.48
MEPE-201ENST00000361056 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
MEPE-201ENST00000361056 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
MEPE-201ENST00000361056 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
MEPE-201ENST00000361056 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
MEPE-201ENST00000361056 CHGAP10645 457 aaKnown RBP12.01□□□□□ -0.49
MEPE-201ENST00000361056 POTEDQ86YR6 584 aa12.01□□□□□ -0.49
MEPE-201ENST00000361056 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
MEPE-201ENST00000361056 MIER1Q8N108 512 aa11.97□□□□□ -0.49
MEPE-201ENST00000361056 STAG3Q9UJ98 1225 aa11.95□□□□□ -0.5
MEPE-201ENST00000361056 CIZ1Q9ULV3 898 aaPredicted RBP11.95□□□□□ -0.5
MEPE-201ENST00000361056 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
MEPE-201ENST00000361056 NESP48681 1621 aa11.85□□□□□ -0.51
MEPE-201ENST00000361056 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
MEPE-201ENST00000361056 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
MEPE-201ENST00000361056 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
MEPE-201ENST00000361056 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
MEPE-201ENST00000361056 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
MEPE-201ENST00000361056 CFTRP13569 1480 aa11.83□□□□□ -0.52
MEPE-201ENST00000361056 NBR1Q14596 966 aa11.83□□□□□ -0.52
MEPE-201ENST00000361056 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
MEPE-201ENST00000361056 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
MEPE-201ENST00000361056 DSG3P32926 999 aa11.79□□□□□ -0.52
MEPE-201ENST00000361056 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
MEPE-201ENST00000361056 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
MEPE-201ENST00000361056 HS6ST3Q8IZP7 471 aa11.78□□□□□ -0.52
MEPE-201ENST00000361056 ABCC8Q09428 1581 aa11.76□□□□□ -0.53
MEPE-201ENST00000361056 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
MEPE-201ENST00000361056 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
MEPE-201ENST00000361056 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
MEPE-201ENST00000361056 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.53
MEPE-201ENST00000361056 PDS5BQ9NTI5 1447 aa11.71□□□□□ -0.54
MEPE-201ENST00000361056 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
MEPE-201ENST00000361056 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
MEPE-201ENST00000361056 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
MEPE-201ENST00000361056 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
MEPE-201ENST00000361056 TRIM41Q8WV44 630 aa11.68□□□□□ -0.54
MEPE-201ENST00000361056 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
MEPE-201ENST00000361056 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
MEPE-201ENST00000361056 SYNJ1O43426 1573 aa11.65□□□□□ -0.54
MEPE-201ENST00000361056 GTPBP6O43824 516 aaPredicted RBP11.64□□□□□ -0.55
MEPE-201ENST00000361056 CUX1P39880 1505 aa11.63□□□□□ -0.55
MEPE-201ENST00000361056 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
MEPE-201ENST00000361056 TOP2BQ02880 1626 aa11.59□□□□□ -0.55
MEPE-201ENST00000361056 NUBP1P53384 320 aa11.59□□□□□ -0.55
MEPE-201ENST00000361056 MRC2Q9UBG0 1479 aa11.58□□□□□ -0.55
MEPE-201ENST00000361056 BIVM-ERCC5R4GMW8 1640 aa11.58□□□□□ -0.56
MEPE-201ENST00000361056 STK25O00506 426 aa11.58□□□□□ -0.56
MEPE-201ENST00000361056 RIOK3O14730 519 aaKnown RBP11.58□□□□□ -0.56
MEPE-201ENST00000361056 DNMBPQ6XZF7 1577 aa11.58□□□□□ -0.56
MEPE-201ENST00000361056 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
MEPE-201ENST00000361056 GTF3C3Q9Y5Q9 886 aa11.57□□□□□ -0.56
MEPE-201ENST00000361056 GSE1Q14687 1217 aa11.56□□□□□ -0.56
MEPE-201ENST00000361056 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
MEPE-201ENST00000361056 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
MEPE-201ENST00000361056 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
MEPE-201ENST00000361056 WDR62O43379 1518 aa11.52□□□□□ -0.57
MEPE-201ENST00000361056 FAM9AQ8IZU1 332 aaPredicted RBP11.52□□□□□ -0.57
MEPE-201ENST00000361056 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
MEPE-201ENST00000361056 RAD54L2Q9Y4B4 1467 aa11.49□□□□□ -0.57
MEPE-201ENST00000361056 SOGA1O94964 1423 aa11.48□□□□□ -0.57
MEPE-201ENST00000361056 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
MEPE-201ENST00000361056 RUSC2Q8N2Y8 1516 aa11.45□□□□□ -0.58
MEPE-201ENST00000361056 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
MEPE-201ENST00000361056 STK24Q9Y6E0 443 aa11.45□□□□□ -0.58
MEPE-201ENST00000361056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.45□□□□□ -0.58
MEPE-201ENST00000361056 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
MEPE-201ENST00000361056 CUX2O14529 1486 aa11.43□□□□□ -0.58
MEPE-201ENST00000361056 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
MEPE-201ENST00000361056 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
MEPE-201ENST00000361056 TARBP1Q13395 1621 aaKnown RBP11.41□□□□□ -0.58
MEPE-201ENST00000361056 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
MEPE-201ENST00000361056 WDR97A6NE52 1622 aa11.41□□□□□ -0.58
MEPE-201ENST00000361056 ABCA10Q8WWZ4 1543 aa11.4□□□□□ -0.58
MEPE-201ENST00000361056 TDRD9Q8NDG6 1382 aaKnown RBP11.4□□□□□ -0.58
MEPE-201ENST00000361056 IFT140Q96RY7 1462 aa11.4□□□□□ -0.59
MEPE-201ENST00000361056 KIF27Q86VH2 1401 aa11.39□□□□□ -0.59
MEPE-201ENST00000361056 PYGBP11216 843 aa11.38□□□□□ -0.59
MEPE-201ENST00000361056 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
MEPE-201ENST00000361056 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
MEPE-201ENST00000361056 TMEM132AQ24JP5 1023 aa11.37□□□□□ -0.59
MEPE-201ENST00000361056 EEA1Q15075 1411 aa11.36□□□□□ -0.59
MEPE-201ENST00000361056 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.59
MEPE-201ENST00000361056 KCNV2Q8TDN2 545 aa11.36□□□□□ -0.59
MEPE-201ENST00000361056 CADPS2Q86UW7 1296 aa11.35□□□□□ -0.59
MEPE-201ENST00000361056 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
MEPE-201ENST00000361056 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
MEPE-201ENST00000361056 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
MEPE-201ENST00000361056 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
MEPE-201ENST00000361056 LOC105371045A0A1W2PR82 267 aa11.33□□□□□ -0.6
MEPE-201ENST00000361056 PBRM1Q86U86 1689 aa11.31□□□□□ -0.6
MEPE-201ENST00000361056 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
MEPE-201ENST00000361056 P3H3Q8IVL6 736 aa11.3□□□□□ -0.6
MEPE-201ENST00000361056 IGF1RP08069 1367 aa11.3□□□□□ -0.6
MEPE-201ENST00000361056 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
MEPE-201ENST00000361056 SGIP1Q9BQI5 828 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms