RNA–Protein interactions for RNA: ENST00000359568.9

PCNT-201, Transcript of pericentrin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCNT, Length 10,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNT-201ENST00000359568 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
PCNT-201ENST00000359568 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
PCNT-201ENST00000359568 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
PCNT-201ENST00000359568 MYH16Q9H6N6 1097 aa13.82□□□□□ -0.2
PCNT-201ENST00000359568 CHAF1AQ13111 956 aaPredicted RBP13.8□□□□□ -0.2
PCNT-201ENST00000359568 PNNQ9H307 717 aaKnown RBP13.77□□□□□ -0.2
PCNT-201ENST00000359568 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.21
PCNT-201ENST00000359568 MSNP26038 577 aaKnown RBP13.75□□□□□ -0.21
PCNT-201ENST00000359568 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.213e-6■■■■□ 20.8
PCNT-201ENST00000359568 TSHZ2Q9NRE2 1034 aa13.74□□□□□ -0.21
PCNT-201ENST00000359568 PKNOX2Q96KN3 472 aa13.73□□□□□ -0.21
PCNT-201ENST00000359568 PODXL2Q9NZ53 605 aa13.73□□□□□ -0.21
PCNT-201ENST00000359568 ARID3AQ99856 593 aa13.72□□□□□ -0.21
PCNT-201ENST00000359568 HSP90AA2PQ14568 343 aaPredicted RBP13.71□□□□□ -0.21
PCNT-201ENST00000359568 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
PCNT-201ENST00000359568 CLIP1P30622 1438 aa13.69□□□□□ -0.22
PCNT-201ENST00000359568 HIRIP3Q9BW71 556 aaPredicted RBP13.68□□□□□ -0.22
PCNT-201ENST00000359568 RGS3P49796 1198 aa13.68□□□□□ -0.22
PCNT-201ENST00000359568 GOLGA6L6A8MZA4 724 aa13.67□□□□□ -0.22
PCNT-201ENST00000359568 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
PCNT-201ENST00000359568 PTMSP20962 102 aa13.67□□□□□ -0.22
PCNT-201ENST00000359568 VSIG10Q8N0Z9 540 aa13.66□□□□□ -0.22
PCNT-201ENST00000359568 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
PCNT-201ENST00000359568 CASC1Q6TDU7 716 aa13.64□□□□□ -0.23
PCNT-201ENST00000359568 TNNT3P45378 269 aaPredicted RBP13.63□□□□□ -0.23
PCNT-201ENST00000359568 CEP162Q5TB80 1403 aa13.62□□□□□ -0.23
PCNT-201ENST00000359568 HSP90AB1P08238 724 aaKnown RBP13.62□□□□□ -0.23
PCNT-201ENST00000359568 HSCBQ8IWL3 235 aa13.62□□□□□ -0.23
PCNT-201ENST00000359568 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.231e-7■■■■■ 71.3
PCNT-201ENST00000359568 NRDCO43847 1150 aa13.61□□□□□ -0.23
PCNT-201ENST00000359568 TPRNQ4KMQ1 711 aa13.6□□□□□ -0.23
PCNT-201ENST00000359568 FTSJ3Q8IY81 847 aaKnown RBP13.59□□□□□ -0.23
PCNT-201ENST00000359568 A0A0U1RQG5 324 aaPredicted RBP13.58□□□□□ -0.24
PCNT-201ENST00000359568 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
PCNT-201ENST00000359568 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
PCNT-201ENST00000359568 KIAA2012Q0VF49 1180 aa13.57□□□□□ -0.24
PCNT-201ENST00000359568 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
PCNT-201ENST00000359568 PLCB2Q00722 1185 aa13.55□□□□□ -0.24
PCNT-201ENST00000359568 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
PCNT-201ENST00000359568 SENP3-EIF4A1A0A087X0R7 540 aa13.53□□□□□ -0.24
PCNT-201ENST00000359568 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
PCNT-201ENST00000359568 GBP4Q96PP9 640 aa13.52□□□□□ -0.24
PCNT-201ENST00000359568 GZF1Q9H116 711 aaPredicted RBP13.52□□□□□ -0.24
PCNT-201ENST00000359568 ZNF777Q9ULD5 760 aaPredicted RBP13.52□□□□□ -0.25
PCNT-201ENST00000359568 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
PCNT-201ENST00000359568 CCER2I3L3R5 266 aa13.5□□□□□ -0.25
PCNT-201ENST00000359568 DRC7Q8IY82 874 aa13.49□□□□□ -0.25
PCNT-201ENST00000359568 SPRYD3Q8NCJ5 442 aa13.49□□□□□ -0.25
PCNT-201ENST00000359568 SLKQ9H2G2 1235 aaPredicted RBP13.49□□□□□ -0.25
PCNT-201ENST00000359568 TCERG1O14776 1098 aaKnown RBP13.46□□□□□ -0.25
PCNT-201ENST00000359568 TIMELESSQ9UNS1 1208 aa13.46□□□□□ -0.25
PCNT-201ENST00000359568 FANCIQ9NVI1 1328 aa13.46□□□□□ -0.25
PCNT-201ENST00000359568 ZBTB7CA1YPR0 619 aa13.46□□□□□ -0.26
PCNT-201ENST00000359568 CALRP27797 417 aaKnown RBP13.46□□□□□ -0.26
PCNT-201ENST00000359568 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
PCNT-201ENST00000359568 CHIC2Q9UKJ5 165 aa13.44□□□□□ -0.26
PCNT-201ENST00000359568 EEA1Q15075 1411 aa13.44□□□□□ -0.26
PCNT-201ENST00000359568 KDM2AQ9Y2K7 1162 aa13.43□□□□□ -0.26
PCNT-201ENST00000359568 MTUS2Q5JR59 1369 aa13.43□□□□□ -0.26
PCNT-201ENST00000359568 GOLGA6L4A6NEF3 574 aa13.42□□□□□ -0.26
PCNT-201ENST00000359568 SYAP1Q96A49 352 aaPredicted RBP13.4□□□□□ -0.26
PCNT-201ENST00000359568 APPP05067 770 aa13.4□□□□□ -0.26
PCNT-201ENST00000359568 GSE1Q14687 1217 aa13.4□□□□□ -0.27
PCNT-201ENST00000359568 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
PCNT-201ENST00000359568 FRAT1Q92837 279 aaPredicted RBP13.37□□□□□ -0.27
PCNT-201ENST00000359568 CHMP4BQ9H444 224 aaKnown RBP13.36□□□□□ -0.27
PCNT-201ENST00000359568 MS4A1P11836 297 aa13.36□□□□□ -0.27
PCNT-201ENST00000359568 DDX11L8A8MPP1 907 aa13.36□□□□□ -0.27
PCNT-201ENST00000359568 CFAP53Q96M91 514 aa13.35□□□□□ -0.27
PCNT-201ENST00000359568 GOLGA6L1Q8N7Z2 621 aa13.35□□□□□ -0.27
PCNT-201ENST00000359568 ZNF771Q7L3S4 317 aaPredicted RBP13.34□□□□□ -0.27
PCNT-201ENST00000359568 RRP7BPQ9NSQ0 103 aa13.33□□□□□ -0.28
PCNT-201ENST00000359568 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
PCNT-201ENST00000359568 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.32□□□□□ -0.28
PCNT-201ENST00000359568 CEP164Q9UPV0 1460 aa13.32□□□□□ -0.28
PCNT-201ENST00000359568 PHF14O94880 888 aa13.32□□□□□ -0.28
PCNT-201ENST00000359568 MCCP23508 829 aa13.31□□□□□ -0.28
PCNT-201ENST00000359568 SETQ01105 290 aaPredicted RBP13.31□□□□□ -0.28
PCNT-201ENST00000359568 RSF1Q96T23 1441 aaPredicted RBP13.31□□□□□ -0.28
PCNT-201ENST00000359568 FGD1P98174 961 aa13.31□□□□□ -0.28
PCNT-201ENST00000359568 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
PCNT-201ENST00000359568 RCAN3Q9UKA8 241 aa13.31□□□□□ -0.28
PCNT-201ENST00000359568 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
PCNT-201ENST00000359568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■■□ 19.5
PCNT-201ENST00000359568 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
PCNT-201ENST00000359568 CDCA8Q53HL2 280 aa13.29□□□□□ -0.28
PCNT-201ENST00000359568 KCNJ4P48050 445 aa13.28□□□□□ -0.28
PCNT-201ENST00000359568 CCNB3Q8WWL7 1395 aa13.27□□□□□ -0.28
PCNT-201ENST00000359568 NOC3LQ8WTT2 800 aaKnown RBP13.27□□□□□ -0.29
PCNT-201ENST00000359568 CFAP44Q96MT7 982 aa13.26□□□□□ -0.29
PCNT-201ENST00000359568 FBLN2P98095 1184 aa13.25□□□□□ -0.29
PCNT-201ENST00000359568 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
PCNT-201ENST00000359568 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
PCNT-201ENST00000359568 SIN3AQ96ST3 1273 aa13.25□□□□□ -0.29
PCNT-201ENST00000359568 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
PCNT-201ENST00000359568 UBE2Q2Q8WVN8 375 aa13.24□□□□□ -0.29
PCNT-201ENST00000359568 ABCC9O60706 1549 aa13.24□□□□□ -0.29
PCNT-201ENST00000359568 CARD11Q9BXL7 1154 aa13.24□□□□□ -0.29
PCNT-201ENST00000359568 BRPF3Q9ULD4 1205 aa13.23□□□□□ -0.29
PCNT-201ENST00000359568 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms