RNA–Protein interactions for RNA: ENST00000359513.8

ATG13-201, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 4,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-201ENST00000359513 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
ATG13-201ENST00000359513 TONSLQ96HA7 1378 aa12.01□□□□□ -0.49
ATG13-201ENST00000359513 NCAPD3P42695 1498 aa12□□□□□ -0.49
ATG13-201ENST00000359513 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
ATG13-201ENST00000359513 ANP32CO43423 234 aa11.98□□□□□ -0.49
ATG13-201ENST00000359513 KDM2AQ9Y2K7 1162 aa11.96□□□□□ -0.49
ATG13-201ENST00000359513 FHAD1B1AJZ9 1412 aa11.94□□□□□ -0.5
ATG13-201ENST00000359513 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
ATG13-201ENST00000359513 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
ATG13-201ENST00000359513 KANK4Q5T7N3 995 aaPredicted RBP11.9□□□□□ -0.5
ATG13-201ENST00000359513 SENP3Q9H4L4 574 aaPredicted RBP11.9□□□□□ -0.5
ATG13-201ENST00000359513 CARMIL2Q6F5E8 1435 aa11.9□□□□□ -0.51
ATG13-201ENST00000359513 CCNB3Q8WWL7 1395 aa11.89□□□□□ -0.51
ATG13-201ENST00000359513 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
ATG13-201ENST00000359513 RGL3Q3MIN7 710 aa11.88□□□□□ -0.51
ATG13-201ENST00000359513 ARID4BQ4LE39 1312 aaPredicted RBP11.87□□□□□ -0.51
ATG13-201ENST00000359513 BICRAQ9NZM4 1560 aa11.87□□□□□ -0.51
ATG13-201ENST00000359513 RAPGEF2Q9Y4G8 1499 aa11.87□□□□□ -0.51
ATG13-201ENST00000359513 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
ATG13-201ENST00000359513 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
ATG13-201ENST00000359513 HIRIP3Q9BW71 556 aaPredicted RBP11.85□□□□□ -0.51
ATG13-201ENST00000359513 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
ATG13-201ENST00000359513 MIER1Q8N108 512 aa11.84□□□□□ -0.51
ATG13-201ENST00000359513 RAD54L2Q9Y4B4 1467 aa11.84□□□□□ -0.51
ATG13-201ENST00000359513 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
ATG13-201ENST00000359513 NESP48681 1621 aa11.82□□□□□ -0.52
ATG13-201ENST00000359513 IGF1RP08069 1367 aa11.81□□□□□ -0.52
ATG13-201ENST00000359513 FHOD3Q2V2M9 1422 aa11.81□□□□□ -0.52
ATG13-201ENST00000359513 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
ATG13-201ENST00000359513 FMN1Q68DA7 1419 aa11.81□□□□□ -0.52
ATG13-201ENST00000359513 CLSPNQ9HAW4 1339 aa11.8□□□□□ -0.52
ATG13-201ENST00000359513 SIN3AQ96ST3 1273 aa11.79□□□□□ -0.52
ATG13-201ENST00000359513 CFTRP13569 1480 aa11.78□□□□□ -0.52
ATG13-201ENST00000359513 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
ATG13-201ENST00000359513 PPP1R15AO75807 674 aaPredicted RBP11.78□□□□□ -0.52
ATG13-201ENST00000359513 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
ATG13-201ENST00000359513 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.537e-6■□□□□ 9.9
ATG13-201ENST00000359513 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
ATG13-201ENST00000359513 MLECQ14165 292 aa11.76□□□□□ -0.53
ATG13-201ENST00000359513 NEFMP07197 916 aa11.76□□□□□ -0.53
ATG13-201ENST00000359513 EFCAB2Q5VUJ9 269 aa11.76□□□□□ -0.53
ATG13-201ENST00000359513 CYB5RLQ6IPT4 315 aa11.76□□□□□ -0.53
ATG13-201ENST00000359513 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
ATG13-201ENST00000359513 UNC13AQ9UPW8 1703 aa11.74□□□□□ -0.53
ATG13-201ENST00000359513 GGT6Q6P531 493 aa11.73□□□□□ -0.53
ATG13-201ENST00000359513 ARHGAP35Q9NRY4 1499 aa11.72□□□□□ -0.53
ATG13-201ENST00000359513 PTPRGP23470 1445 aa11.72□□□□□ -0.53
ATG13-201ENST00000359513 SUPT16HQ9Y5B9 1047 aaKnown RBP11.72□□□□□ -0.53
ATG13-201ENST00000359513 ANP32EQ9BTT0 268 aa11.71□□□□□ -0.54
ATG13-201ENST00000359513 HMGXB3Q12766 1538 aa11.7□□□□□ -0.54
ATG13-201ENST00000359513 HNRNPMP52272 730 aaKnown RBP eCLIP11.7□□□□□ -0.54
ATG13-201ENST00000359513 FAM9BQ8IZU0 186 aa11.7□□□□□ -0.54
ATG13-201ENST00000359513 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
ATG13-201ENST00000359513 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
ATG13-201ENST00000359513 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
ATG13-201ENST00000359513 FOXD1Q16676 465 aa11.67□□□□□ -0.54
ATG13-201ENST00000359513 CARD11Q9BXL7 1154 aa11.67□□□□□ -0.54
ATG13-201ENST00000359513 PKD2Q13563 968 aa11.66□□□□□ -0.54
ATG13-201ENST00000359513 C14orf37Q86TY3 774 aa11.66□□□□□ -0.54
ATG13-201ENST00000359513 BCL11AQ9H165 835 aa11.66□□□□□ -0.54
ATG13-201ENST00000359513 PLEKHG5O94827 1062 aa11.65□□□□□ -0.54
ATG13-201ENST00000359513 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.54
ATG13-201ENST00000359513 SETD5Q9C0A6 1442 aa11.65□□□□□ -0.55
ATG13-201ENST00000359513 DCAF11Q8TEB1 546 aa11.64□□□□□ -0.55
ATG13-201ENST00000359513 DAXXQ9UER7 740 aaPredicted RBP11.63□□□□□ -0.55
ATG13-201ENST00000359513 KIF3BO15066 747 aa11.63□□□□□ -0.55
ATG13-201ENST00000359513 CANXP27824 592 aaKnown RBP11.63□□□□□ -0.55
ATG13-201ENST00000359513 KANK1Q14678 1352 aa11.63□□□□□ -0.55
ATG13-201ENST00000359513 MRS2Q9HD23 443 aa11.63□□□□□ -0.55
ATG13-201ENST00000359513 MRC2Q9UBG0 1479 aa11.62□□□□□ -0.55
ATG13-201ENST00000359513 TOPBP1Q92547 1522 aa11.62□□□□□ -0.55
ATG13-201ENST00000359513 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
ATG13-201ENST00000359513 SYNJ1O43426 1573 aa11.61□□□□□ -0.55
ATG13-201ENST00000359513 SPAG9O60271 1321 aaKnown RBP11.61□□□□□ -0.55
ATG13-201ENST00000359513 NUP155O75694 1391 aa11.61□□□□□ -0.55
ATG13-201ENST00000359513 CCDC18Q5T9S5 1454 aa11.6□□□□□ -0.55
ATG13-201ENST00000359513 MPHOSPH9Q99550 1183 aa11.6□□□□□ -0.55
ATG13-201ENST00000359513 ANKRD30AQ9BXX3 1397 aa11.6□□□□□ -0.55
ATG13-201ENST00000359513 POLA1P09884 1462 aaPredicted RBP11.6□□□□□ -0.55
ATG13-201ENST00000359513 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
ATG13-201ENST00000359513 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
ATG13-201ENST00000359513 POGKQ9P215 609 aa11.59□□□□□ -0.55
ATG13-201ENST00000359513 CUX1P39880 1505 aa11.58□□□□□ -0.56
ATG13-201ENST00000359513 WDR43Q15061 677 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATG13-201ENST00000359513 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
ATG13-201ENST00000359513 IFT140Q96RY7 1462 aa11.55□□□□□ -0.56
ATG13-201ENST00000359513 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
ATG13-201ENST00000359513 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
ATG13-201ENST00000359513 TIMELESSQ9UNS1 1208 aa11.54□□□□□ -0.56
ATG13-201ENST00000359513 KIF21BO75037 1637 aa11.54□□□□□ -0.56
ATG13-201ENST00000359513 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
ATG13-201ENST00000359513 SAFB2Q14151 953 aaKnown RBP eCLIP11.52□□□□□ -0.56
ATG13-201ENST00000359513 WASHC2CQ9Y4E1 1318 aa11.52□□□□□ -0.56
ATG13-201ENST00000359513 FAM69CQ0P6D2 419 aa11.52□□□□□ -0.57
ATG13-201ENST00000359513 ZNF644Q9H582 1327 aaPredicted RBP11.52□□□□□ -0.57
ATG13-201ENST00000359513 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
ATG13-201ENST00000359513 SENP3-EIF4A1A0A087X0R7 540 aa11.51□□□□□ -0.57
ATG13-201ENST00000359513 TOP2BQ02880 1626 aa11.51□□□□□ -0.57
ATG13-201ENST00000359513 PPM1GO15355 546 aaPredicted RBP11.5□□□□□ -0.57
ATG13-201ENST00000359513 STK26Q9P289 416 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms