RNA–Protein interactions for RNA: ENST00000359415.8

ARCN1-202, Transcript of archain 1, humanhuman

TSL 1 (best) BASIC

Gene ARCN1, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-202ENST00000359415 VPS8Q8N3P4 1428 aa9.89□□□□□ -0.83
ARCN1-202ENST00000359415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.89□□□□□ -0.83
ARCN1-202ENST00000359415 HNRNPUL2Q1KMD3 747 aaKnown RBP9.89□□□□□ -0.83
ARCN1-202ENST00000359415 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
ARCN1-202ENST00000359415 ARID3CA6NKF2 412 aa9.87□□□□□ -0.83
ARCN1-202ENST00000359415 ARHGAP35Q9NRY4 1499 aa9.87□□□□□ -0.83
ARCN1-202ENST00000359415 FHOD3Q2V2M9 1422 aa9.85□□□□□ -0.83
ARCN1-202ENST00000359415 TARBP1Q13395 1621 aaKnown RBP9.84□□□□□ -0.83
ARCN1-202ENST00000359415 WDR97A6NE52 1622 aa9.83□□□□□ -0.84
ARCN1-202ENST00000359415 ITGAEP38570 1179 aa9.83□□□□□ -0.84
ARCN1-202ENST00000359415 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
ARCN1-202ENST00000359415 WDR62O43379 1518 aa9.8□□□□□ -0.84
ARCN1-202ENST00000359415 CCER1Q8TC90 406 aaPredicted RBP9.8□□□□□ -0.84
ARCN1-202ENST00000359415 CUL7Q14999 1698 aa9.78□□□□□ -0.84
ARCN1-202ENST00000359415 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
ARCN1-202ENST00000359415 IFT140Q96RY7 1462 aa9.78□□□□□ -0.84
ARCN1-202ENST00000359415 THOC2Q8NI27 1593 aaKnown RBP9.78□□□□□ -0.84
ARCN1-202ENST00000359415 SNAPC4Q5SXM2 1469 aa9.77□□□□□ -0.85
ARCN1-202ENST00000359415 PBRM1Q86U86 1689 aa9.77□□□□□ -0.85
ARCN1-202ENST00000359415 GRIN2BQ13224 1484 aa9.76□□□□□ -0.85
ARCN1-202ENST00000359415 EIF4G3O43432 1585 aaKnown RBP9.75□□□□□ -0.85
ARCN1-202ENST00000359415 FHAD1B1AJZ9 1412 aa9.74□□□□□ -0.85
ARCN1-202ENST00000359415 CTTNBP2Q8WZ74 1663 aa9.73□□□□□ -0.85
ARCN1-202ENST00000359415 PCF11O94913 1555 aaKnown RBP9.72□□□□□ -0.85
ARCN1-202ENST00000359415 ADAMTS12P58397 1594 aa9.72□□□□□ -0.85
ARCN1-202ENST00000359415 FAM50AQ14320 339 aaKnown RBP9.71□□□□□ -0.85
ARCN1-202ENST00000359415 GRIN2AQ12879 1464 aa9.67□□□□□ -0.86
ARCN1-202ENST00000359415 TIAM1Q13009 1591 aa9.66□□□□□ -0.86
ARCN1-202ENST00000359415 IQGAP2Q13576 1575 aa9.66□□□□□ -0.86
ARCN1-202ENST00000359415 ZBTB22O15209 634 aa9.66□□□□□ -0.86
ARCN1-202ENST00000359415 PHLDB1Q86UU1 1377 aa9.66□□□□□ -0.86
ARCN1-202ENST00000359415 SLC4A1APQ9BWU0 796 aaKnown RBP9.65□□□□□ -0.86
ARCN1-202ENST00000359415 EFCAB5A4FU69 1503 aa9.65□□□□□ -0.86
ARCN1-202ENST00000359415 LRRC9Q6ZRR7 1453 aa9.65□□□□□ -0.87
ARCN1-202ENST00000359415 FMN1Q68DA7 1419 aa9.64□□□□□ -0.87
ARCN1-202ENST00000359415 MTUS2Q5JR59 1369 aa9.64□□□□□ -0.87
ARCN1-202ENST00000359415 CASKIN1Q8WXD9 1431 aa9.63□□□□□ -0.87
ARCN1-202ENST00000359415 SYNJ2O15056 1496 aa9.63□□□□□ -0.87
ARCN1-202ENST00000359415 CCNB3Q8WWL7 1395 aa9.63□□□□□ -0.87
ARCN1-202ENST00000359415 JPH4Q96JJ6 628 aa9.63□□□□□ -0.87
ARCN1-202ENST00000359415 CEP170Q5SW79 1584 aa9.62□□□□□ -0.87
ARCN1-202ENST00000359415 SAMD9Q5K651 1589 aa9.62□□□□□ -0.87
ARCN1-202ENST00000359415 MAGI1Q96QZ7 1491 aaPredicted RBP9.62□□□□□ -0.87
ARCN1-202ENST00000359415 ZEB1P37275 1124 aaPredicted RBP9.61□□□□□ -0.87
ARCN1-202ENST00000359415 FYCO1Q9BQS8 1478 aa9.61□□□□□ -0.87
ARCN1-202ENST00000359415 CDK13Q14004 1512 aaKnown RBP9.61□□□□□ -0.87
ARCN1-202ENST00000359415 KIAA0586Q9BVV6 1533 aa9.6□□□□□ -0.87
ARCN1-202ENST00000359415 LRRIQ1Q96JM4 1722 aa9.59□□□□□ -0.87
ARCN1-202ENST00000359415 DISP1Q96F81 1524 aa9.59□□□□□ -0.87
ARCN1-202ENST00000359415 PPP6R1Q9UPN7 881 aa9.58□□□□□ -0.88
ARCN1-202ENST00000359415 CHIC2Q9UKJ5 165 aa9.57□□□□□ -0.88
ARCN1-202ENST00000359415 RRBP1Q9P2E9 1410 aaKnown RBP9.57□□□□□ -0.88
ARCN1-202ENST00000359415 PLB1Q6P1J6 1458 aa9.57□□□□□ -0.88
ARCN1-202ENST00000359415 CFAP43Q8NDM7 1665 aa9.57□□□□□ -0.88
ARCN1-202ENST00000359415 KIAA0556O60303 1618 aa9.56□□□□□ -0.88
ARCN1-202ENST00000359415 MAGI3Q5TCQ9 1506 aa9.56□□□□□ -0.88
ARCN1-202ENST00000359415 UGGT2Q9NYU1 1516 aa9.55□□□□□ -0.88
ARCN1-202ENST00000359415 EPRSP07814 1512 aaKnown RBP9.54□□□□□ -0.88
ARCN1-202ENST00000359415 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
ARCN1-202ENST00000359415 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
ARCN1-202ENST00000359415 PRG4Q92954 1404 aaPredicted RBP9.54□□□□□ -0.88
ARCN1-202ENST00000359415 NCOA2Q15596 1464 aa9.54□□□□□ -0.88
ARCN1-202ENST00000359415 CHD1O14646 1710 aa9.54□□□□□ -0.88
ARCN1-202ENST00000359415 NUP160Q12769 1436 aa9.53□□□□□ -0.88
ARCN1-202ENST00000359415 MAP3K1Q13233 1512 aa9.52□□□□□ -0.88
ARCN1-202ENST00000359415 RRP7BPQ9NSQ0 103 aa9.52□□□□□ -0.89
ARCN1-202ENST00000359415 CARMIL2Q6F5E8 1435 aa9.52□□□□□ -0.89
ARCN1-202ENST00000359415 ZNF644Q9H582 1327 aaPredicted RBP9.52□□□□□ -0.89
ARCN1-202ENST00000359415 PRKCSHP14314 528 aaPredicted RBP9.52□□□□□ -0.89
ARCN1-202ENST00000359415 RAB3GAP2Q9H2M9 1393 aa9.51□□□□□ -0.89
ARCN1-202ENST00000359415 NUP153P49790 1475 aaKnown RBP9.51□□□□□ -0.89
ARCN1-202ENST00000359415 HECW1Q76N89 1606 aa9.51□□□□□ -0.89
ARCN1-202ENST00000359415 FGD6Q6ZV73 1430 aa9.51□□□□□ -0.89
ARCN1-202ENST00000359415 ERCC6L2Q5T890 1561 aa9.5□□□□□ -0.89
ARCN1-202ENST00000359415 DHX57Q6P158 1386 aaKnown RBP9.49□□□□□ -0.89
ARCN1-202ENST00000359415 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
ARCN1-202ENST00000359415 RAPGEF6Q8TEU7 1601 aa9.48□□□□□ -0.89
ARCN1-202ENST00000359415 PTPRGP23470 1445 aa9.48□□□□□ -0.89
ARCN1-202ENST00000359415 PTPRKQ15262 1439 aa9.48□□□□□ -0.89
ARCN1-202ENST00000359415 MYOM3Q5VTT5 1437 aa9.48□□□□□ -0.89
ARCN1-202ENST00000359415 CCDC18Q5T9S5 1454 aa9.48□□□□□ -0.89
ARCN1-202ENST00000359415 KCNH8Q96L42 1107 aa9.47□□□□□ -0.89
ARCN1-202ENST00000359415 EHBP1L1Q8N3D4 1523 aa9.47□□□□□ -0.89
ARCN1-202ENST00000359415 CDK11AQ9UQ88 783 aaPredicted RBP9.47□□□□□ -0.89
ARCN1-202ENST00000359415 SUPT6HQ7KZ85 1726 aaKnown RBP9.47□□□□□ -0.89
ARCN1-202ENST00000359415 SIN3AQ96ST3 1273 aa9.46□□□□□ -0.9
ARCN1-202ENST00000359415 SETD5Q9C0A6 1442 aa9.45□□□□□ -0.9
ARCN1-202ENST00000359415 PLEKHD1A6NEE1 506 aa9.45□□□□□ -0.9
ARCN1-202ENST00000359415 CFDP1Q9UEE9 299 aaPredicted RBP9.44□□□□□ -0.9
ARCN1-202ENST00000359415 TRIM52Q96A61 297 aa9.43□□□□□ -0.9
ARCN1-202ENST00000359415 PTPN23Q9H3S7 1636 aa9.42□□□□□ -0.9
ARCN1-202ENST00000359415 KIF14Q15058 1648 aa9.42□□□□□ -0.9
ARCN1-202ENST00000359415 ATP10BO94823 1461 aa9.41□□□□□ -0.9
ARCN1-202ENST00000359415 FOXD1Q16676 465 aa9.41□□□□□ -0.9
ARCN1-202ENST00000359415 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.91
ARCN1-202ENST00000359415 ARHGEF11O15085 1522 aa9.39□□□□□ -0.91
ARCN1-202ENST00000359415 HNRNPMP52272 730 aaKnown RBP eCLIP9.38□□□□□ -0.91
ARCN1-202ENST00000359415 ABCA8O94911 1581 aa9.38□□□□□ -0.91
ARCN1-202ENST00000359415 UACAQ9BZF9 1416 aa9.38□□□□□ -0.91
ARCN1-202ENST00000359415 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms