RNA–Protein interactions for RNA: ENST00000359308.8

XRCC6-201, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC6, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-201ENST00000359308 DIEXFQ68CQ4 756 aaKnown RBP20.44■□□□□ 0.86
XRCC6-201ENST00000359308 ITGAEP38570 1179 aa20.43■□□□□ 0.86
XRCC6-201ENST00000359308 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
XRCC6-201ENST00000359308 CTTNBP2Q8WZ74 1663 aa20.43■□□□□ 0.86
XRCC6-201ENST00000359308 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
XRCC6-201ENST00000359308 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
XRCC6-201ENST00000359308 FHAD1B1AJZ9 1412 aa20.4■□□□□ 0.86
XRCC6-201ENST00000359308 LRRC9Q6ZRR7 1453 aa20.39■□□□□ 0.85
XRCC6-201ENST00000359308 DHX57Q6P158 1386 aaKnown RBP20.38■□□□□ 0.85
XRCC6-201ENST00000359308 MAP3K1Q13233 1512 aa20.37■□□□□ 0.85
XRCC6-201ENST00000359308 ZNF316A6NFI3 1004 aaPredicted RBP20.36■□□□□ 0.85
XRCC6-201ENST00000359308 CFAP43Q8NDM7 1665 aa20.36■□□□□ 0.85
XRCC6-201ENST00000359308 EFCAB5A4FU69 1503 aa20.35■□□□□ 0.85
XRCC6-201ENST00000359308 PHLDB1Q86UU1 1377 aa20.34■□□□□ 0.85
XRCC6-201ENST00000359308 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.84
XRCC6-201ENST00000359308 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
XRCC6-201ENST00000359308 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.84
XRCC6-201ENST00000359308 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
XRCC6-201ENST00000359308 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.836e-7■■■■□ 22.3
XRCC6-201ENST00000359308 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
XRCC6-201ENST00000359308 SAMD9Q5K651 1589 aa20.23■□□□□ 0.83
XRCC6-201ENST00000359308 PBRM1Q86U86 1689 aa20.23■□□□□ 0.83
XRCC6-201ENST00000359308 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
XRCC6-201ENST00000359308 RAB3GAP2Q9H2M9 1393 aa20.22■□□□□ 0.83
XRCC6-201ENST00000359308 FMN1Q68DA7 1419 aa20.22■□□□□ 0.83
XRCC6-201ENST00000359308 CLSPNQ9HAW4 1339 aa20.21■□□□□ 0.83
XRCC6-201ENST00000359308 LRRIQ1Q96JM4 1722 aa20.19■□□□□ 0.82
XRCC6-201ENST00000359308 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
XRCC6-201ENST00000359308 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
XRCC6-201ENST00000359308 ADAMTS12P58397 1594 aa20.13■□□□□ 0.81
XRCC6-201ENST00000359308 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
XRCC6-201ENST00000359308 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
XRCC6-201ENST00000359308 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
XRCC6-201ENST00000359308 MAPKBP1O60336 1514 aa20.1■□□□□ 0.81
XRCC6-201ENST00000359308 NEUROD1Q13562 356 aa20.09■□□□□ 0.81
XRCC6-201ENST00000359308 IQGAP2Q13576 1575 aa20.07■□□□□ 0.8
XRCC6-201ENST00000359308 MIER1Q8N108 512 aa20.07■□□□□ 0.8
XRCC6-201ENST00000359308 FGD6Q6ZV73 1430 aa20.07■□□□□ 0.8
XRCC6-201ENST00000359308 WDR62O43379 1518 aa20.06■□□□□ 0.8
XRCC6-201ENST00000359308 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
XRCC6-201ENST00000359308 ACIN1Q9UKV3 1341 aaKnown RBP20.04■□□□□ 0.8
XRCC6-201ENST00000359308 NCOA2Q15596 1464 aa20.03■□□□□ 0.8
XRCC6-201ENST00000359308 MAGI3Q5TCQ9 1506 aa20.02■□□□□ 0.79
XRCC6-201ENST00000359308 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
XRCC6-201ENST00000359308 THOC2Q8NI27 1593 aaKnown RBP20.01■□□□□ 0.79
XRCC6-201ENST00000359308 ERCC6Q03468 1493 aa20■□□□□ 0.79
XRCC6-201ENST00000359308 YTHDC1Q96MU7 727 aaKnown RBP20■□□□□ 0.79
XRCC6-201ENST00000359308 SUPT6HQ7KZ85 1726 aaKnown RBP19.98■□□□□ 0.79
XRCC6-201ENST00000359308 EIF4G3O43432 1585 aaKnown RBP19.98■□□□□ 0.79
XRCC6-201ENST00000359308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.98■□□□□ 0.79
XRCC6-201ENST00000359308 EHBP1L1Q8N3D4 1523 aa19.98■□□□□ 0.79
XRCC6-201ENST00000359308 PTPRKQ15262 1439 aa19.97■□□□□ 0.79
XRCC6-201ENST00000359308 SIN3AQ96ST3 1273 aa19.97■□□□□ 0.79
XRCC6-201ENST00000359308 MYOM3Q5VTT5 1437 aa19.96■□□□□ 0.79
XRCC6-201ENST00000359308 CDK13Q14004 1512 aaKnown RBP19.95■□□□□ 0.78
XRCC6-201ENST00000359308 HECW1Q76N89 1606 aa19.95■□□□□ 0.78
XRCC6-201ENST00000359308 CENPBP07199 599 aaPredicted RBP19.95■□□□□ 0.78
XRCC6-201ENST00000359308 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
XRCC6-201ENST00000359308 UGGT2Q9NYU1 1516 aa19.93■□□□□ 0.78
XRCC6-201ENST00000359308 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
XRCC6-201ENST00000359308 PTPN23Q9H3S7 1636 aa19.89■□□□□ 0.78
XRCC6-201ENST00000359308 GRIN2AQ12879 1464 aa19.89■□□□□ 0.77
XRCC6-201ENST00000359308 ARHGEF11O15085 1522 aa19.89■□□□□ 0.77
XRCC6-201ENST00000359308 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
XRCC6-201ENST00000359308 KIAA0586Q9BVV6 1533 aa19.87■□□□□ 0.77
XRCC6-201ENST00000359308 KIAA0556O60303 1618 aa19.87■□□□□ 0.77
XRCC6-201ENST00000359308 HFM1A2PYH4 1435 aa19.86■□□□□ 0.77
XRCC6-201ENST00000359308 NAIPQ13075 1403 aa19.83■□□□□ 0.77
XRCC6-201ENST00000359308 FBLN2P98095 1184 aa19.83■□□□□ 0.76
XRCC6-201ENST00000359308 GTF3C3Q9Y5Q9 886 aa19.82■□□□□ 0.76
XRCC6-201ENST00000359308 CHIC2Q9UKJ5 165 aa19.82■□□□□ 0.76
XRCC6-201ENST00000359308 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
XRCC6-201ENST00000359308 CEP170Q5SW79 1584 aa19.8■□□□□ 0.76
XRCC6-201ENST00000359308 RRP7BPQ9NSQ0 103 aa19.8■□□□□ 0.76
XRCC6-201ENST00000359308 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
XRCC6-201ENST00000359308 NUP153P49790 1475 aaKnown RBP19.78■□□□□ 0.76
XRCC6-201ENST00000359308 TCOF1Q13428 1488 aaKnown RBP19.77■□□□□ 0.76
XRCC6-201ENST00000359308 UACAQ9BZF9 1416 aa19.77■□□□□ 0.76
XRCC6-201ENST00000359308 SYNJ2O15056 1496 aa19.76■□□□□ 0.75
XRCC6-201ENST00000359308 PELP1Q8IZL8 1130 aaKnown RBP19.76■□□□□ 0.75
XRCC6-201ENST00000359308 RAPGEF6Q8TEU7 1601 aa19.75■□□□□ 0.75
XRCC6-201ENST00000359308 KDM6BO15054 1643 aa19.71■□□□□ 0.75
XRCC6-201ENST00000359308 PLB1Q6P1J6 1458 aa19.7■□□□□ 0.74
XRCC6-201ENST00000359308 HIRIP3Q9BW71 556 aaPredicted RBP19.7■□□□□ 0.74
XRCC6-201ENST00000359308 GCC2Q8IWJ2 1684 aa19.7■□□□□ 0.74
XRCC6-201ENST00000359308 MIA2Q96PC5 1412 aa19.69■□□□□ 0.74
XRCC6-201ENST00000359308 PPP1R15AO75807 674 aaPredicted RBP19.69■□□□□ 0.74
XRCC6-201ENST00000359308 TONSLQ96HA7 1378 aa19.68■□□□□ 0.74
XRCC6-201ENST00000359308 ZNF644Q9H582 1327 aaPredicted RBP19.68■□□□□ 0.74
XRCC6-201ENST00000359308 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
XRCC6-201ENST00000359308 PRG4Q92954 1404 aaPredicted RBP19.66■□□□□ 0.74
XRCC6-201ENST00000359308 NUP160Q12769 1436 aa19.65■□□□□ 0.74
XRCC6-201ENST00000359308 TRIM52Q96A61 297 aa19.65■□□□□ 0.74
XRCC6-201ENST00000359308 JPH4Q96JJ6 628 aa19.64■□□□□ 0.73
XRCC6-201ENST00000359308 DENND4BO75064 1496 aaPredicted RBP19.63■□□□□ 0.73
XRCC6-201ENST00000359308 DDX10Q13206 875 aaKnown RBP19.61■□□□□ 0.73
XRCC6-201ENST00000359308 DAPK1P53355 1430 aa19.61■□□□□ 0.73
XRCC6-201ENST00000359308 CDK11AQ9UQ88 783 aaPredicted RBP19.61■□□□□ 0.73
XRCC6-201ENST00000359308 AKNAQ7Z591 1439 aa19.6■□□□□ 0.73
XRCC6-201ENST00000359308 KIF14Q15058 1648 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms