RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KIF13AQ9H1H9 1805 aa22.41■■□□□ 1.18
PDLIM5-203ENST00000359265 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.17
PDLIM5-203ENST00000359265 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
PDLIM5-203ENST00000359265 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
PDLIM5-203ENST00000359265 CUL7Q14999 1698 aa22.36■■□□□ 1.17
PDLIM5-203ENST00000359265 PRXQ9BXM0 1461 aa22.35■■□□□ 1.17
PDLIM5-203ENST00000359265 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.17
PDLIM5-203ENST00000359265 GRIN2BQ13224 1484 aa22.33■■□□□ 1.16
PDLIM5-203ENST00000359265 IGF1RP08069 1367 aa22.32■■□□□ 1.16
PDLIM5-203ENST00000359265 RAPGEF2Q9Y4G8 1499 aa22.3■■□□□ 1.16
PDLIM5-203ENST00000359265 TNIKQ9UKE5 1360 aa22.27■■□□□ 1.16
PDLIM5-203ENST00000359265 CARMIL1Q5VZK9 1371 aa22.24■■□□□ 1.15
PDLIM5-203ENST00000359265 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
PDLIM5-203ENST00000359265 UBTFP17480 764 aaKnown RBP22.22■■□□□ 1.15
PDLIM5-203ENST00000359265 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
PDLIM5-203ENST00000359265 FAM69CQ0P6D2 419 aa22.18■■□□□ 1.14
PDLIM5-203ENST00000359265 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
PDLIM5-203ENST00000359265 CEP162Q5TB80 1403 aa22.15■■□□□ 1.14
PDLIM5-203ENST00000359265 CTTNBP2Q8WZ74 1663 aa22.13■■□□□ 1.13
PDLIM5-203ENST00000359265 ABCC10Q5T3U5 1492 aa22.1■■□□□ 1.13
PDLIM5-203ENST00000359265 KDM6BO15054 1643 aa22.07■■□□□ 1.12
PDLIM5-203ENST00000359265 GRIN2AQ12879 1464 aa22.04■■□□□ 1.12
PDLIM5-203ENST00000359265 SHROOM2Q13796 1616 aa22.04■■□□□ 1.12
PDLIM5-203ENST00000359265 NUP160Q12769 1436 aa22.03■■□□□ 1.12
PDLIM5-203ENST00000359265 CLIP1P30622 1438 aa22.01■■□□□ 1.11
PDLIM5-203ENST00000359265 DIP2BQ9P265 1576 aa22■■□□□ 1.11
PDLIM5-203ENST00000359265 HECW2Q9P2P5 1572 aa21.99■■□□□ 1.11
PDLIM5-203ENST00000359265 TSPOAP1O95153 1857 aa21.97■■□□□ 1.11
PDLIM5-203ENST00000359265 ADGRL1O94910 1474 aa21.94■■□□□ 1.1
PDLIM5-203ENST00000359265 MAPKBP1O60336 1514 aa21.92■■□□□ 1.1
PDLIM5-203ENST00000359265 PRG4Q92954 1404 aaPredicted RBP21.92■■□□□ 1.1
PDLIM5-203ENST00000359265 FBXO41Q8TF61 875 aa21.91■■□□□ 1.1
PDLIM5-203ENST00000359265 NPM1P06748 294 aaKnown RBP eCLIP21.9■■□□□ 1.1
PDLIM5-203ENST00000359265 IQGAP2Q13576 1575 aa21.89■■□□□ 1.09
PDLIM5-203ENST00000359265 EFCAB5A4FU69 1503 aa21.87■■□□□ 1.09
PDLIM5-203ENST00000359265 KIAA0586Q9BVV6 1533 aa21.87■■□□□ 1.09
PDLIM5-203ENST00000359265 JPH4Q96JJ6 628 aa21.86■■□□□ 1.09
PDLIM5-203ENST00000359265 ARHGAP35Q9NRY4 1499 aa21.84■■□□□ 1.09
PDLIM5-203ENST00000359265 RANGAP1P46060 587 aaPredicted RBP21.83■■□□□ 1.09
PDLIM5-203ENST00000359265 VPS8Q8N3P4 1428 aa21.82■■□□□ 1.08
PDLIM5-203ENST00000359265 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
PDLIM5-203ENST00000359265 SAMD9Q5K651 1589 aa21.79■■□□□ 1.08
PDLIM5-203ENST00000359265 FOXD1Q16676 465 aa21.78■■□□□ 1.08
PDLIM5-203ENST00000359265 UGGT2Q9NYU1 1516 aa21.76■■□□□ 1.07
PDLIM5-203ENST00000359265 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
PDLIM5-203ENST00000359265 PPRC1Q5VV67 1664 aaKnown RBP21.69■■□□□ 1.06
PDLIM5-203ENST00000359265 KIAA0556O60303 1618 aa21.66■■□□□ 1.06
PDLIM5-203ENST00000359265 FHOD3Q2V2M9 1422 aa21.65■■□□□ 1.06
PDLIM5-203ENST00000359265 CARMIL2Q6F5E8 1435 aa21.64■■□□□ 1.06
PDLIM5-203ENST00000359265 LMTK3Q96Q04 1460 aa21.64■■□□□ 1.05
PDLIM5-203ENST00000359265 PCF11O94913 1555 aaKnown RBP21.62■■□□□ 1.05
PDLIM5-203ENST00000359265 DISP1Q96F81 1524 aa21.62■■□□□ 1.05
PDLIM5-203ENST00000359265 FMN1Q68DA7 1419 aa21.6■■□□□ 1.05
PDLIM5-203ENST00000359265 ILDR2Q71H61 639 aa21.57■■□□□ 1.04
PDLIM5-203ENST00000359265 P3H3Q8IVL6 736 aa21.57■■□□□ 1.04
PDLIM5-203ENST00000359265 FYCO1Q9BQS8 1478 aa21.57■■□□□ 1.04
PDLIM5-203ENST00000359265 APLP2Q06481 763 aa21.56■■□□□ 1.04
PDLIM5-203ENST00000359265 CFAP43Q8NDM7 1665 aa21.56■■□□□ 1.04
PDLIM5-203ENST00000359265 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
PDLIM5-203ENST00000359265 GLI2P10070 1586 aa21.52■■□□□ 1.04
PDLIM5-203ENST00000359265 MAP3K1Q13233 1512 aa21.51■■□□□ 1.03
PDLIM5-203ENST00000359265 TIAM1Q13009 1591 aa21.5■■□□□ 1.03
PDLIM5-203ENST00000359265 SOCS7O14512 581 aa21.5■■□□□ 1.03
PDLIM5-203ENST00000359265 ASXL2Q76L83 1435 aa21.49■■□□□ 1.03
PDLIM5-203ENST00000359265 HECW1Q76N89 1606 aa21.49■■□□□ 1.03
PDLIM5-203ENST00000359265 LRRIQ1Q96JM4 1722 aa21.46■■□□□ 1.03
PDLIM5-203ENST00000359265 TRIM26Q12899 539 aaPredicted RBP21.45■■□□□ 1.02
PDLIM5-203ENST00000359265 PPARGC1BQ86YN6 1023 aaKnown RBP21.45■■□□□ 1.02
PDLIM5-203ENST00000359265 TTBK1Q5TCY1 1321 aaPredicted RBP21.45■■□□□ 1.02
PDLIM5-203ENST00000359265 PLB1Q6P1J6 1458 aa21.43■■□□□ 1.02
PDLIM5-203ENST00000359265 PTPRGP23470 1445 aa21.42■■□□□ 1.02
PDLIM5-203ENST00000359265 RAPGEF6Q8TEU7 1601 aa21.42■■□□□ 1.02
PDLIM5-203ENST00000359265 ABCC2Q92887 1545 aa21.42■■□□□ 1.02
PDLIM5-203ENST00000359265 MAP3K4Q9Y6R4 1608 aa21.39■■□□□ 1.01
PDLIM5-203ENST00000359265 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.01
PDLIM5-203ENST00000359265 ABCA8O94911 1581 aa21.36■■□□□ 1.01
PDLIM5-203ENST00000359265 EPRSP07814 1512 aaKnown RBP21.35■■□□□ 1.01
PDLIM5-203ENST00000359265 ATP1B4Q9UN42 357 aaPredicted RBP21.35■■□□□ 1.01
PDLIM5-203ENST00000359265 LRRC9Q6ZRR7 1453 aa21.34■■□□□ 1.01
PDLIM5-203ENST00000359265 PCGF6Q9BYE7 350 aa21.33■■□□□ 1.01
PDLIM5-203ENST00000359265 DISP3Q9P2K9 1392 aa21.33■■□□□ 1
PDLIM5-203ENST00000359265 TEX14Q8IWB6 1497 aa21.32■■□□□ 1
PDLIM5-203ENST00000359265 UACAQ9BZF9 1416 aa21.29■■□□□ 1
PDLIM5-203ENST00000359265 KANK4Q5T7N3 995 aaPredicted RBP21.29■■□□□ 1
PDLIM5-203ENST00000359265 EHBP1L1Q8N3D4 1523 aa21.29■■□□□ 1
PDLIM5-203ENST00000359265 NUP153P49790 1475 aaKnown RBP21.28■■□□□ 1
PDLIM5-203ENST00000359265 UHRF1BP1LA0JNW5 1464 aa21.26■□□□□ 0.99
PDLIM5-203ENST00000359265 CDK13Q14004 1512 aaKnown RBP21.25■□□□□ 0.99
PDLIM5-203ENST00000359265 SUPT6HQ7KZ85 1726 aaKnown RBP21.24■□□□□ 0.99
PDLIM5-203ENST00000359265 PTPRMP28827 1452 aa21.24■□□□□ 0.99
PDLIM5-203ENST00000359265 MTUS2Q5JR59 1369 aa21.22■□□□□ 0.99
PDLIM5-203ENST00000359265 CERKQ8TCT0 537 aa21.2■□□□□ 0.98
PDLIM5-203ENST00000359265 KDM5BQ9UGL1 1544 aa21.19■□□□□ 0.98
PDLIM5-203ENST00000359265 MAGI3Q5TCQ9 1506 aa21.18■□□□□ 0.98
PDLIM5-203ENST00000359265 ADAMTSL3P82987 1691 aa21.16■□□□□ 0.98
PDLIM5-203ENST00000359265 CDK11AQ9UQ88 783 aaPredicted RBP21.16■□□□□ 0.98
PDLIM5-203ENST00000359265 ATP10BO94823 1461 aa21.15■□□□□ 0.98
PDLIM5-203ENST00000359265 ZCCHC11Q5TAX3 1644 aaKnown RBP21.15■□□□□ 0.98
PDLIM5-203ENST00000359265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.14■□□□□ 0.97
PDLIM5-203ENST00000359265 HNRNPUL2Q1KMD3 747 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms