RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC4-201ENST00000359005 FAM9AQ8IZU1 332 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC4-201ENST00000359005 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
TRAPPC4-201ENST00000359005 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
TRAPPC4-201ENST00000359005 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
TRAPPC4-201ENST00000359005 CSRNP3Q8WYN3 585 aa17.22■□□□□ 0.35
TRAPPC4-201ENST00000359005 KIAA0586Q9BVV6 1533 aa17.21■□□□□ 0.35
TRAPPC4-201ENST00000359005 LOC105371045A0A1W2PR82 267 aa17.2■□□□□ 0.34
TRAPPC4-201ENST00000359005 TTBK1Q5TCY1 1321 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC4-201ENST00000359005 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
TRAPPC4-201ENST00000359005 CUL7Q14999 1698 aa17.11■□□□□ 0.33
TRAPPC4-201ENST00000359005 KIF21BO75037 1637 aa17.1■□□□□ 0.33
TRAPPC4-201ENST00000359005 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
TRAPPC4-201ENST00000359005 PTPRGP23470 1445 aa17.07■□□□□ 0.32
TRAPPC4-201ENST00000359005 TNIKQ9UKE5 1360 aa17.05■□□□□ 0.32
TRAPPC4-201ENST00000359005 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAPPC4-201ENST00000359005 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-201ENST00000359005 FAM69CQ0P6D2 419 aa17.02■□□□□ 0.32
TRAPPC4-201ENST00000359005 DISP1Q96F81 1524 aa17.01■□□□□ 0.31
TRAPPC4-201ENST00000359005 PRXQ9BXM0 1461 aa17■□□□□ 0.31
TRAPPC4-201ENST00000359005 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
TRAPPC4-201ENST00000359005 CARMIL2Q6F5E8 1435 aa16.98■□□□□ 0.31
TRAPPC4-201ENST00000359005 IQGAP2Q13576 1575 aa16.98■□□□□ 0.31
TRAPPC4-201ENST00000359005 ABCC10Q5T3U5 1492 aa16.95■□□□□ 0.3
TRAPPC4-201ENST00000359005 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
TRAPPC4-201ENST00000359005 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
TRAPPC4-201ENST00000359005 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
TRAPPC4-201ENST00000359005 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
TRAPPC4-201ENST00000359005 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
TRAPPC4-201ENST00000359005 P3H3Q8IVL6 736 aa16.89■□□□□ 0.29
TRAPPC4-201ENST00000359005 ABCC2Q92887 1545 aa16.89■□□□□ 0.29
TRAPPC4-201ENST00000359005 UHRF1BP1LA0JNW5 1464 aa16.87■□□□□ 0.29
TRAPPC4-201ENST00000359005 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
TRAPPC4-201ENST00000359005 PLB1Q6P1J6 1458 aa16.84■□□□□ 0.29
TRAPPC4-201ENST00000359005 DIP2BQ9P265 1576 aa16.84■□□□□ 0.29
TRAPPC4-201ENST00000359005 KIAA0556O60303 1618 aa16.84■□□□□ 0.29
TRAPPC4-201ENST00000359005 KIF13AQ9H1H9 1805 aa16.84■□□□□ 0.29
TRAPPC4-201ENST00000359005 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
TRAPPC4-201ENST00000359005 RANGAP1P46060 587 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC4-201ENST00000359005 CLIP1P30622 1438 aa16.8■□□□□ 0.28
TRAPPC4-201ENST00000359005 ARID3CA6NKF2 412 aa16.8■□□□□ 0.28
TRAPPC4-201ENST00000359005 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
TRAPPC4-201ENST00000359005 EPRSP07814 1512 aaKnown RBP16.74■□□□□ 0.27
TRAPPC4-201ENST00000359005 ABCA8O94911 1581 aa16.72■□□□□ 0.27
TRAPPC4-201ENST00000359005 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-201ENST00000359005 COL17A1Q9UMD9 1497 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC4-201ENST00000359005 CTTNBP2Q8WZ74 1663 aa16.7■□□□□ 0.26
TRAPPC4-201ENST00000359005 APLP2Q06481 763 aa16.69■□□□□ 0.26
TRAPPC4-201ENST00000359005 GLI2P10070 1586 aa16.68■□□□□ 0.26
TRAPPC4-201ENST00000359005 ATP10BO94823 1461 aa16.68■□□□□ 0.26
TRAPPC4-201ENST00000359005 ZCCHC11Q5TAX3 1644 aaKnown RBP16.68■□□□□ 0.26
TRAPPC4-201ENST00000359005 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
TRAPPC4-201ENST00000359005 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
TRAPPC4-201ENST00000359005 FHOD3Q2V2M9 1422 aa16.66■□□□□ 0.26
TRAPPC4-201ENST00000359005 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC4-201ENST00000359005 TSPOAP1O95153 1857 aa16.64■□□□□ 0.25
TRAPPC4-201ENST00000359005 KDM4FA0A1W2PPD8 638 aa16.63■□□□□ 0.25
TRAPPC4-201ENST00000359005 SAMD9Q5K651 1589 aa16.63■□□□□ 0.25
TRAPPC4-201ENST00000359005 EFCAB5A4FU69 1503 aa16.62■□□□□ 0.25
TRAPPC4-201ENST00000359005 PPRC1Q5VV67 1664 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-201ENST00000359005 KDM6BO15054 1643 aa16.6■□□□□ 0.25
TRAPPC4-201ENST00000359005 CD109Q6YHK3 1445 aa16.6■□□□□ 0.25
TRAPPC4-201ENST00000359005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC4-201ENST00000359005 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
TRAPPC4-201ENST00000359005 NUP153P49790 1475 aaKnown RBP16.58■□□□□ 0.24
TRAPPC4-201ENST00000359005 PCGF6Q9BYE7 350 aa16.57■□□□□ 0.24
TRAPPC4-201ENST00000359005 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
TRAPPC4-201ENST00000359005 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
TRAPPC4-201ENST00000359005 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
TRAPPC4-201ENST00000359005 TEX14Q8IWB6 1497 aa16.51■□□□□ 0.23
TRAPPC4-201ENST00000359005 RAPGEF6Q8TEU7 1601 aa16.5■□□□□ 0.23
TRAPPC4-201ENST00000359005 PLEKHD1A6NEE1 506 aa16.49■□□□□ 0.23
TRAPPC4-201ENST00000359005 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
TRAPPC4-201ENST00000359005 RAPGEF3O95398 923 aa16.47■□□□□ 0.23
TRAPPC4-201ENST00000359005 ATP1B4Q9UN42 357 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC4-201ENST00000359005 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
TRAPPC4-201ENST00000359005 CDK13Q14004 1512 aaKnown RBP16.43■□□□□ 0.22
TRAPPC4-201ENST00000359005 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
TRAPPC4-201ENST00000359005 CFAP43Q8NDM7 1665 aa16.4■□□□□ 0.22
TRAPPC4-201ENST00000359005 ARAP3Q8WWN8 1544 aa16.4■□□□□ 0.22
TRAPPC4-201ENST00000359005 ABCA9Q8IUA7 1624 aa16.39■□□□□ 0.21
TRAPPC4-201ENST00000359005 ADGRL1O94910 1474 aa16.38■□□□□ 0.21
TRAPPC4-201ENST00000359005 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
TRAPPC4-201ENST00000359005 PPARGC1BQ86YN6 1023 aaKnown RBP16.36■□□□□ 0.21
TRAPPC4-201ENST00000359005 PHLDB1Q86UU1 1377 aa16.35■□□□□ 0.21
TRAPPC4-201ENST00000359005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRAPPC4-201ENST00000359005 NEO1Q92859 1461 aa16.34■□□□□ 0.21
TRAPPC4-201ENST00000359005 TIAM1Q13009 1591 aa16.33■□□□□ 0.2
TRAPPC4-201ENST00000359005 AKNAQ7Z591 1439 aa16.32■□□□□ 0.2
TRAPPC4-201ENST00000359005 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
TRAPPC4-201ENST00000359005 PLCH2O75038 1416 aa16.29■□□□□ 0.2
TRAPPC4-201ENST00000359005 CDK11AQ9UQ88 783 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC4-201ENST00000359005 TTC37Q6PGP7 1564 aa16.29■□□□□ 0.2
TRAPPC4-201ENST00000359005 FANCAO15360 1455 aa16.29■□□□□ 0.2
TRAPPC4-201ENST00000359005 CCDC18Q5T9S5 1454 aa16.29■□□□□ 0.2
TRAPPC4-201ENST00000359005 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
TRAPPC4-201ENST00000359005 TROQ12816 1431 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC4-201ENST00000359005 FRMPD1Q5SYB0 1578 aa16.26■□□□□ 0.19
TRAPPC4-201ENST00000359005 DENND4BO75064 1496 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-201ENST00000359005 EFCAB2Q5VUJ9 269 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms