RNA–Protein interactions for RNA: ENST00000358580.9

APBB3-204, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 5 BASIC

Gene APBB3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-204ENST00000358580 DHX57Q6P158 1386 aaKnown RBP32.84■■■□□ 2.85
APBB3-204ENST00000358580 LRRC9Q6ZRR7 1453 aa32.82■■■□□ 2.85
APBB3-204ENST00000358580 CFAP43Q8NDM7 1665 aa32.8■■■□□ 2.84
APBB3-204ENST00000358580 CTTNBP2Q8WZ74 1663 aa32.8■■■□□ 2.84
APBB3-204ENST00000358580 AQRO60306 1485 aaKnown RBP eCLIP32.78■■■□□ 2.842e-6■■■■■ 39.8
APBB3-204ENST00000358580 ABCA5Q8WWZ7 1642 aa32.77■■■□□ 2.84
APBB3-204ENST00000358580 PCF11O94913 1555 aaKnown RBP32.74■■■□□ 2.83
APBB3-204ENST00000358580 FYCO1Q9BQS8 1478 aa32.74■■■□□ 2.83
APBB3-204ENST00000358580 CASKIN1Q8WXD9 1431 aa32.7■■■□□ 2.82
APBB3-204ENST00000358580 GAPVD1Q14C86 1478 aa32.67■■■□□ 2.82
APBB3-204ENST00000358580 FHOD3Q2V2M9 1422 aa32.65■■■□□ 2.82
APBB3-204ENST00000358580 FMN1Q68DA7 1419 aa32.62■■■□□ 2.81
APBB3-204ENST00000358580 KIF21AQ7Z4S6 1674 aa32.62■■■□□ 2.81
APBB3-204ENST00000358580 PHLDB1Q86UU1 1377 aa32.58■■■□□ 2.81
APBB3-204ENST00000358580 TDRD9Q8NDG6 1382 aaKnown RBP32.58■■■□□ 2.81
APBB3-204ENST00000358580 P3H3Q8IVL6 736 aa32.56■■■□□ 2.8
APBB3-204ENST00000358580 TARBP1Q13395 1621 aaKnown RBP32.56■■■□□ 2.8
APBB3-204ENST00000358580 SAMD9Q5K651 1589 aa32.55■■■□□ 2.8
APBB3-204ENST00000358580 ACIN1Q9UKV3 1341 aaKnown RBP32.54■■■□□ 2.8
APBB3-204ENST00000358580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.54■■■□□ 2.8
APBB3-204ENST00000358580 SCAF1Q9H7N4 1312 aaKnown RBP32.54■■■□□ 2.8
APBB3-204ENST00000358580 CENPBP07199 599 aaPredicted RBP32.53■■■□□ 2.8
APBB3-204ENST00000358580 SNAPC4Q5SXM2 1469 aa32.49■■■□□ 2.79
APBB3-204ENST00000358580 RAB3GAP2Q9H2M9 1393 aa32.49■■■□□ 2.79
APBB3-204ENST00000358580 SETD5Q9C0A6 1442 aa32.48■■■□□ 2.79
APBB3-204ENST00000358580 DNAJC5BQ9UF47 199 aa32.48■■■□□ 2.79
APBB3-204ENST00000358580 ITGAEP38570 1179 aa32.43■■■□□ 2.78
APBB3-204ENST00000358580 THOC2Q8NI27 1593 aaKnown RBP32.43■■■□□ 2.78
APBB3-204ENST00000358580 ATP1B4Q9UN42 357 aaPredicted RBP32.4■■■□□ 2.78
APBB3-204ENST00000358580 NEUROD1Q13562 356 aa32.38■■■□□ 2.77
APBB3-204ENST00000358580 MRC2Q9UBG0 1479 aa32.37■■■□□ 2.77
APBB3-204ENST00000358580 PBRM1Q86U86 1689 aa32.34■■■□□ 2.77
APBB3-204ENST00000358580 GRIN2BQ13224 1484 aa32.34■■■□□ 2.77
APBB3-204ENST00000358580 FAM50AQ14320 339 aaKnown RBP32.34■■■□□ 2.77
APBB3-204ENST00000358580 MAPKBP1O60336 1514 aa32.33■■■□□ 2.77
APBB3-204ENST00000358580 FGD6Q6ZV73 1430 aa32.28■■■□□ 2.76
APBB3-204ENST00000358580 MTUS2Q5JR59 1369 aa32.27■■■□□ 2.76
APBB3-204ENST00000358580 MIER1Q8N108 512 aa32.27■■■□□ 2.76
APBB3-204ENST00000358580 ADAMTS12P58397 1594 aa32.25■■■□□ 2.75
APBB3-204ENST00000358580 LRRIQ1Q96JM4 1722 aa32.22■■■□□ 2.75
APBB3-204ENST00000358580 EHBP1L1Q8N3D4 1523 aa32.21■■■□□ 2.75
APBB3-204ENST00000358580 CCDC18Q5T9S5 1454 aa32.2■■■□□ 2.75
APBB3-204ENST00000358580 IQGAP2Q13576 1575 aa32.19■■■□□ 2.74
APBB3-204ENST00000358580 IFT140Q96RY7 1462 aa32.19■■■□□ 2.74
APBB3-204ENST00000358580 SUPT6HQ7KZ85 1726 aaKnown RBP32.17■■■□□ 2.74
APBB3-204ENST00000358580 TIMELESSQ9UNS1 1208 aa32.16■■■□□ 2.74
APBB3-204ENST00000358580 WDR62O43379 1518 aa32.15■■■□□ 2.74
APBB3-204ENST00000358580 NCOA2Q15596 1464 aa32.14■■■□□ 2.74
APBB3-204ENST00000358580 MYOM3Q5VTT5 1437 aa32.14■■■□□ 2.74
APBB3-204ENST00000358580 HECW1Q76N89 1606 aa32.11■■■□□ 2.73
APBB3-204ENST00000358580 ARHGEF11O15085 1522 aa32.11■■■□□ 2.73
APBB3-204ENST00000358580 UGGT2Q9NYU1 1516 aa32.07■■■□□ 2.73
APBB3-204ENST00000358580 HFM1A2PYH4 1435 aa32.06■■■□□ 2.72
APBB3-204ENST00000358580 GTF3C3Q9Y5Q9 886 aa32.01■■■□□ 2.71
APBB3-204ENST00000358580 EPRSP07814 1512 aaKnown RBP31.97■■■□□ 2.71
APBB3-204ENST00000358580 MAGI3Q5TCQ9 1506 aa31.97■■■□□ 2.71
APBB3-204ENST00000358580 PTPN23Q9H3S7 1636 aa31.97■■■□□ 2.71
APBB3-204ENST00000358580 TCOF1Q13428 1488 aaKnown RBP31.96■■■□□ 2.71
APBB3-204ENST00000358580 PTPRKQ15262 1439 aa31.96■■■□□ 2.71
APBB3-204ENST00000358580 KIAA0586Q9BVV6 1533 aa31.96■■■□□ 2.71
APBB3-204ENST00000358580 ZNF608Q9ULD9 1512 aaPredicted RBP31.96■■■□□ 2.71
APBB3-204ENST00000358580 UACAQ9BZF9 1416 aa31.94■■■□□ 2.7
APBB3-204ENST00000358580 YTHDC1Q96MU7 727 aaKnown RBP31.92■■■□□ 2.7
APBB3-204ENST00000358580 NAIPQ13075 1403 aa31.91■■■□□ 2.7
APBB3-204ENST00000358580 SIN3AQ96ST3 1273 aa31.89■■■□□ 2.7
APBB3-204ENST00000358580 MIA2Q96PC5 1412 aa31.88■■■□□ 2.69
APBB3-204ENST00000358580 EIF4G3O43432 1585 aaKnown RBP31.86■■■□□ 2.69
APBB3-204ENST00000358580 AKNAQ7Z591 1439 aa31.85■■■□□ 2.69
APBB3-204ENST00000358580 GRIN2AQ12879 1464 aa31.84■■■□□ 2.69
APBB3-204ENST00000358580 KIAA0556O60303 1618 aa31.84■■■□□ 2.69
APBB3-204ENST00000358580 PELP1Q8IZL8 1130 aaKnown RBP31.83■■■□□ 2.69
APBB3-204ENST00000358580 DISP1Q96F81 1524 aa31.82■■■□□ 2.68
APBB3-204ENST00000358580 MAGI1Q96QZ7 1491 aaPredicted RBP31.81■■■□□ 2.68
APBB3-204ENST00000358580 PPP1R15AO75807 674 aaPredicted RBP31.8■■■□□ 2.68
APBB3-204ENST00000358580 CDK13Q14004 1512 aaKnown RBP31.78■■■□□ 2.68
APBB3-204ENST00000358580 GCC2Q8IWJ2 1684 aa31.77■■■□□ 2.68
APBB3-204ENST00000358580 ERCC6Q03468 1493 aa31.76■■■□□ 2.68
APBB3-204ENST00000358580 RAPGEF6Q8TEU7 1601 aa31.69■■■□□ 2.66
APBB3-204ENST00000358580 TONSLQ96HA7 1378 aa31.69■■■□□ 2.66
APBB3-204ENST00000358580 SYNJ2O15056 1496 aa31.68■■■□□ 2.66
APBB3-204ENST00000358580 NUP153P49790 1475 aaKnown RBP31.67■■■□□ 2.66
APBB3-204ENST00000358580 CDK11AQ9UQ88 783 aaPredicted RBP31.62■■■□□ 2.65
APBB3-204ENST00000358580 ROCK1Q13464 1354 aa31.59■■■□□ 2.65
APBB3-204ENST00000358580 CEP170Q5SW79 1584 aa31.59■■■□□ 2.65
APBB3-204ENST00000358580 CHMP7Q8WUX9 453 aaPredicted RBP31.56■■■□□ 2.64
APBB3-204ENST00000358580 RRP7BPQ9NSQ0 103 aa31.55■■■□□ 2.64
APBB3-204ENST00000358580 NUP160Q12769 1436 aa31.55■■■□□ 2.64
APBB3-204ENST00000358580 DNMT1P26358 1616 aaKnown RBP31.53■■■□□ 2.64
APBB3-204ENST00000358580 DAPK1P53355 1430 aa31.52■■■□□ 2.64
APBB3-204ENST00000358580 CARMIL2Q6F5E8 1435 aa31.51■■■□□ 2.64
APBB3-204ENST00000358580 CHIC2Q9UKJ5 165 aa31.51■■■□□ 2.64
APBB3-204ENST00000358580 TROQ12816 1431 aaPredicted RBP31.5■■■□□ 2.63
APBB3-204ENST00000358580 KDM5BQ9UGL1 1544 aa31.48■■■□□ 2.63
APBB3-204ENST00000358580 DENND4BO75064 1496 aaPredicted RBP31.48■■■□□ 2.63
APBB3-204ENST00000358580 KDM6BO15054 1643 aa31.46■■■□□ 2.63
APBB3-204ENST00000358580 ABCC5O15440 1437 aa31.46■■■□□ 2.63
APBB3-204ENST00000358580 DDX10Q13206 875 aaKnown RBP31.46■■■□□ 2.63
APBB3-204ENST00000358580 ARID3CA6NKF2 412 aa31.45■■■□□ 2.63
APBB3-204ENST00000358580 ADCY10Q96PN6 1610 aa31.44■■■□□ 2.62
APBB3-204ENST00000358580 ITSN2Q9NZM3 1697 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms