RNA–Protein interactions for RNA: ENST00000358015.7

RAD23B-201, Transcript of RAD23 homolog B, nucleotide excision repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD23B, Length 4,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23B-201ENST00000358015 SETD5Q9C0A6 1442 aa21.79■■□□□ 1.08
RAD23B-201ENST00000358015 KCNH8Q96L42 1107 aa21.78■■□□□ 1.08
RAD23B-201ENST00000358015 TSHZ2Q9NRE2 1034 aa21.78■■□□□ 1.08
RAD23B-201ENST00000358015 EIF4G2P78344 907 aaKnown RBP eCLIP21.77■■□□□ 1.07
RAD23B-201ENST00000358015 CUX2O14529 1486 aa21.75■■□□□ 1.07
RAD23B-201ENST00000358015 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
RAD23B-201ENST00000358015 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
RAD23B-201ENST00000358015 TIMELESSQ9UNS1 1208 aa21.72■■□□□ 1.07
RAD23B-201ENST00000358015 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
RAD23B-201ENST00000358015 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
RAD23B-201ENST00000358015 ANP32AP39687 249 aaKnown RBP21.69■■□□□ 1.06
RAD23B-201ENST00000358015 CCER2I3L3R5 266 aa21.67■■□□□ 1.06
RAD23B-201ENST00000358015 FBLN2P98095 1184 aa21.66■■□□□ 1.06
RAD23B-201ENST00000358015 KIF21BO75037 1637 aa21.64■■□□□ 1.06
RAD23B-201ENST00000358015 RBM19Q9Y4C8 960 aaKnown RBP21.64■■□□□ 1.05
RAD23B-201ENST00000358015 PPP1R15AO75807 674 aaPredicted RBP21.62■■□□□ 1.05
RAD23B-201ENST00000358015 CCDC136Q96JN2 1154 aa21.62■■□□□ 1.05
RAD23B-201ENST00000358015 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
RAD23B-201ENST00000358015 NPM2Q86SE8 214 aaKnown RBP21.61■■□□□ 1.05
RAD23B-201ENST00000358015 TMC1Q8TDI8 760 aa21.58■■□□□ 1.05
RAD23B-201ENST00000358015 SALL2Q9Y467 1007 aaPredicted RBP21.58■■□□□ 1.05
RAD23B-201ENST00000358015 SLC4A1APQ9BWU0 796 aaKnown RBP21.57■■□□□ 1.04
RAD23B-201ENST00000358015 SYNJ1O43426 1573 aa21.56■■□□□ 1.04
RAD23B-201ENST00000358015 NBR1Q14596 966 aa21.56■■□□□ 1.04
RAD23B-201ENST00000358015 SENP3-EIF4A1A0A087X0R7 540 aa21.55■■□□□ 1.04
RAD23B-201ENST00000358015 ARHGAP35Q9NRY4 1499 aa21.55■■□□□ 1.04
RAD23B-201ENST00000358015 PPP4R2Q9NY27 417 aa21.5■■□□□ 1.03
RAD23B-201ENST00000358015 HSPA5P11021 654 aaKnown RBP21.48■■□□□ 1.03
RAD23B-201ENST00000358015 KDM2AQ9Y2K7 1162 aa21.48■■□□□ 1.03
RAD23B-201ENST00000358015 B4GALNT3Q6L9W6 998 aa21.47■■□□□ 1.03
RAD23B-201ENST00000358015 ZBTB47Q9UFB7 747 aaPredicted RBP21.45■■□□□ 1.02
RAD23B-201ENST00000358015 ARAP1Q96P48 1450 aa21.44■■□□□ 1.02
RAD23B-201ENST00000358015 FHOD3Q2V2M9 1422 aa21.43■■□□□ 1.02
RAD23B-201ENST00000358015 FOXD1Q16676 465 aa21.39■■□□□ 1.01
RAD23B-201ENST00000358015 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
RAD23B-201ENST00000358015 IGF1RP08069 1367 aa21.36■■□□□ 1.01
RAD23B-201ENST00000358015 BCL11AQ9H165 835 aa21.34■■□□□ 1.01
RAD23B-201ENST00000358015 PHLDB1Q86UU1 1377 aa21.34■■□□□ 1.01
RAD23B-201ENST00000358015 TSPY4P0CV99 314 aa21.33■■□□□ 1
RAD23B-201ENST00000358015 TSPY10P0CW01 314 aa21.33■■□□□ 1
RAD23B-201ENST00000358015 PRXQ9BXM0 1461 aa21.33■■□□□ 1
RAD23B-201ENST00000358015 FMN1Q68DA7 1419 aa21.32■■□□□ 1
RAD23B-201ENST00000358015 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
RAD23B-201ENST00000358015 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
RAD23B-201ENST00000358015 CFDP1Q9UEE9 299 aaPredicted RBP21.29■■□□□ 1
RAD23B-201ENST00000358015 MPHOSPH9Q99550 1183 aa21.28■■□□□ 1
RAD23B-201ENST00000358015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.27■■□□□ 13e-9■□□□□ 9.6
RAD23B-201ENST00000358015 L3MBTL2Q969R5 705 aa21.27■■□□□ 1
RAD23B-201ENST00000358015 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
RAD23B-201ENST00000358015 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
RAD23B-201ENST00000358015 CARD11Q9BXL7 1154 aa21.26■□□□□ 0.99
RAD23B-201ENST00000358015 LRRC9Q6ZRR7 1453 aa21.24■□□□□ 0.99
RAD23B-201ENST00000358015 CANXP27824 592 aaKnown RBP21.24■□□□□ 0.99
RAD23B-201ENST00000358015 ERICH6BQ5W0A0 696 aa21.23■□□□□ 0.99
RAD23B-201ENST00000358015 NOP58Q9Y2X3 529 aaKnown RBP21.23■□□□□ 0.99
RAD23B-201ENST00000358015 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
RAD23B-201ENST00000358015 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
RAD23B-201ENST00000358015 RGL3Q3MIN7 710 aa21.19■□□□□ 0.98
RAD23B-201ENST00000358015 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
RAD23B-201ENST00000358015 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
RAD23B-201ENST00000358015 PLEKHD1A6NEE1 506 aa21.14■□□□□ 0.98
RAD23B-201ENST00000358015 WDR43Q15061 677 aaKnown RBP eCLIP21.12■□□□□ 0.97
RAD23B-201ENST00000358015 NCAPD3P42695 1498 aa21.12■□□□□ 0.97
RAD23B-201ENST00000358015 PRKRIP1Q9H875 184 aaPredicted RBP21.12■□□□□ 0.97
RAD23B-201ENST00000358015 FGD6Q6ZV73 1430 aa21.11■□□□□ 0.97
RAD23B-201ENST00000358015 CUX1P39880 1505 aa21.11■□□□□ 0.97
RAD23B-201ENST00000358015 DEKP35659 375 aaKnown RBP21.1■□□□□ 0.97
RAD23B-201ENST00000358015 WDR97A6NE52 1622 aa21.09■□□□□ 0.97
RAD23B-201ENST00000358015 PKD2Q13563 968 aa21.08■□□□□ 0.97
RAD23B-201ENST00000358015 DCAF11Q8TEB1 546 aa21.07■□□□□ 0.96
RAD23B-201ENST00000358015 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.06■□□□□ 0.96
RAD23B-201ENST00000358015 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
RAD23B-201ENST00000358015 CFTRP13569 1480 aa21.05■□□□□ 0.96
RAD23B-201ENST00000358015 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
RAD23B-201ENST00000358015 LAS1LQ9Y4W2 734 aaKnown RBP21.04■□□□□ 0.96
RAD23B-201ENST00000358015 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
RAD23B-201ENST00000358015 NUDCQ9Y266 331 aa21.03■□□□□ 0.96
RAD23B-201ENST00000358015 WASHC2AQ641Q2 1341 aa21.03■□□□□ 0.96
RAD23B-201ENST00000358015 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
RAD23B-201ENST00000358015 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.96
RAD23B-201ENST00000358015 FANCIQ9NVI1 1328 aa21.01■□□□□ 0.95
RAD23B-201ENST00000358015 CC2D1BQ5T0F9 858 aaKnown RBP21.01■□□□□ 0.95
RAD23B-201ENST00000358015 ZBED9Q6R2W3 1325 aa21■□□□□ 0.95
RAD23B-201ENST00000358015 CASKIN1Q8WXD9 1431 aa20.98■□□□□ 0.95
RAD23B-201ENST00000358015 NEFMP07197 916 aa20.97■□□□□ 0.95
RAD23B-201ENST00000358015 MYOM3Q5VTT5 1437 aa20.97■□□□□ 0.95
RAD23B-201ENST00000358015 DDRGK1Q96HY6 314 aa20.96■□□□□ 0.95
RAD23B-201ENST00000358015 EIF5BO60841 1220 aaKnown RBP20.94■□□□□ 0.94
RAD23B-201ENST00000358015 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
RAD23B-201ENST00000358015 CHGAP10645 457 aaKnown RBP20.94■□□□□ 0.94
RAD23B-201ENST00000358015 KNSTRNQ9Y448 316 aa20.93■□□□□ 0.94
RAD23B-201ENST00000358015 RCAN3Q9UKA8 241 aa20.92■□□□□ 0.94
RAD23B-201ENST00000358015 PPM1GO15355 546 aaPredicted RBP20.92■□□□□ 0.94
RAD23B-201ENST00000358015 CCDC7Q96M83 1385 aa20.91■□□□□ 0.94
RAD23B-201ENST00000358015 FYCO1Q9BQS8 1478 aa20.91■□□□□ 0.94
RAD23B-201ENST00000358015 UPF2Q9HAU5 1272 aaKnown RBP20.9■□□□□ 0.94
RAD23B-201ENST00000358015 NUP155O75694 1391 aa20.9■□□□□ 0.94
RAD23B-201ENST00000358015 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
RAD23B-201ENST00000358015 NCOA2Q15596 1464 aa20.9■□□□□ 0.94
RAD23B-201ENST00000358015 IPO9Q96P70 1041 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms