RNA–Protein interactions for RNA: ENST00000357681.9

ATP2B4-203, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2B4, Length 8,968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-203ENST00000357681 NAP1L5Q96NT1 182 aaPredicted RBP11.47□□□□□ -0.57
ATP2B4-203ENST00000357681 MTERF4Q7Z6M4 381 aaKnown RBP11.46□□□□□ -0.57
ATP2B4-203ENST00000357681 NBR1Q14596 966 aa11.46□□□□□ -0.58
ATP2B4-203ENST00000357681 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.58
ATP2B4-203ENST00000357681 WDR43Q15061 677 aaKnown RBP eCLIP11.44□□□□□ -0.58
ATP2B4-203ENST00000357681 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
ATP2B4-203ENST00000357681 SYAP1Q96A49 352 aaPredicted RBP11.43□□□□□ -0.58
ATP2B4-203ENST00000357681 BCL11AQ9H165 835 aa11.42□□□□□ -0.58
ATP2B4-203ENST00000357681 GOLGA6L3A6NEY3 463 aa11.42□□□□□ -0.58
ATP2B4-203ENST00000357681 KIAA2012Q0VF49 1180 aa11.4□□□□□ -0.58
ATP2B4-203ENST00000357681 SCAF1Q9H7N4 1312 aaKnown RBP11.4□□□□□ -0.59
ATP2B4-203ENST00000357681 MAP7D2Q96T17 732 aa11.39□□□□□ -0.59
ATP2B4-203ENST00000357681 RSF1Q96T23 1441 aaPredicted RBP11.39□□□□□ -0.59
ATP2B4-203ENST00000357681 SETQ01105 290 aaPredicted RBP11.38□□□□□ -0.59
ATP2B4-203ENST00000357681 PHF14O94880 888 aa11.38□□□□□ -0.59
ATP2B4-203ENST00000357681 GBP4Q96PP9 640 aa11.37□□□□□ -0.59
ATP2B4-203ENST00000357681 HTATSF1O43719 755 aaKnown RBP11.37□□□□□ -0.59
ATP2B4-203ENST00000357681 TNNT3P45378 269 aaPredicted RBP11.37□□□□□ -0.59
ATP2B4-203ENST00000357681 CCDC34Q96HJ3 373 aa11.36□□□□□ -0.59
ATP2B4-203ENST00000357681 GOLGA6L1Q8N7Z2 621 aa11.36□□□□□ -0.59
ATP2B4-203ENST00000357681 CHMP4AQ9BY43 222 aa11.36□□□□□ -0.59
ATP2B4-203ENST00000357681 CCER2I3L3R5 266 aa11.35□□□□□ -0.59
ATP2B4-203ENST00000357681 EIF4G2P78344 907 aaKnown RBP eCLIP11.35□□□□□ -0.59
ATP2B4-203ENST00000357681 CSRNP3Q8WYN3 585 aa11.35□□□□□ -0.59
ATP2B4-203ENST00000357681 CSPP1Q1MSJ5 1256 aa11.34□□□□□ -0.59
ATP2B4-203ENST00000357681 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
ATP2B4-203ENST00000357681 CHMP4CQ96CF2 233 aa11.33□□□□□ -0.6
ATP2B4-203ENST00000357681 MCCP23508 829 aa11.32□□□□□ -0.6
ATP2B4-203ENST00000357681 PHLDB1Q86UU1 1377 aa11.31□□□□□ -0.6
ATP2B4-203ENST00000357681 GOLGA6L4A6NEF3 574 aa11.31□□□□□ -0.6
ATP2B4-203ENST00000357681 HSCBQ8IWL3 235 aa11.31□□□□□ -0.6
ATP2B4-203ENST00000357681 CNGB1Q14028 1251 aaPredicted RBP11.3□□□□□ -0.6
ATP2B4-203ENST00000357681 CFAP53Q96M91 514 aa11.3□□□□□ -0.6
ATP2B4-203ENST00000357681 GPS2Q13227 327 aa11.29□□□□□ -0.6
ATP2B4-203ENST00000357681 TCERG1O14776 1098 aaKnown RBP11.28□□□□□ -0.6
ATP2B4-203ENST00000357681 GOLGA3Q08378 1498 aa11.28□□□□□ -0.6
ATP2B4-203ENST00000357681 HSP90AA2PQ14568 343 aaPredicted RBP11.27□□□□□ -0.6
ATP2B4-203ENST00000357681 TPM4P67936 248 aa11.26□□□□□ -0.61
ATP2B4-203ENST00000357681 DEKP35659 375 aaKnown RBP11.26□□□□□ -0.61
ATP2B4-203ENST00000357681 SKOR2Q2VWA4 1001 aaPredicted RBP11.25□□□□□ -0.61
ATP2B4-203ENST00000357681 TAF3Q5VWG9 929 aa11.25□□□□□ -0.61
ATP2B4-203ENST00000357681 NOM1Q5C9Z4 860 aaKnown RBP11.25□□□□□ -0.61
ATP2B4-203ENST00000357681 HSP90AB1P08238 724 aaKnown RBP11.23□□□□□ -0.61
ATP2B4-203ENST00000357681 FAM9BQ8IZU0 186 aa11.23□□□□□ -0.61
ATP2B4-203ENST00000357681 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
ATP2B4-203ENST00000357681 FTSJ3Q8IY81 847 aaKnown RBP11.23□□□□□ -0.61
ATP2B4-203ENST00000357681 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
ATP2B4-203ENST00000357681 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
ATP2B4-203ENST00000357681 DHX8Q14562 1220 aaKnown RBP11.22□□□□□ -0.61
ATP2B4-203ENST00000357681 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
ATP2B4-203ENST00000357681 TEX35Q5T0J7 233 aa11.21□□□□□ -0.62
ATP2B4-203ENST00000357681 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
ATP2B4-203ENST00000357681 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
ATP2B4-203ENST00000357681 CLIP1P30622 1438 aa11.19□□□□□ -0.62
ATP2B4-203ENST00000357681 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
ATP2B4-203ENST00000357681 KIF3AQ9Y496 699 aa11.18□□□□□ -0.62
ATP2B4-203ENST00000357681 CALD1Q05682 793 aaKnown RBP11.18□□□□□ -0.62
ATP2B4-203ENST00000357681 AAMPQ13685 434 aa11.17□□□□□ -0.62
ATP2B4-203ENST00000357681 CCDC70Q6NSX1 233 aa11.17□□□□□ -0.62
ATP2B4-203ENST00000357681 NGEFQ8N5V2 710 aa11.17□□□□□ -0.62
ATP2B4-203ENST00000357681 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
ATP2B4-203ENST00000357681 CCDC66A2RUB6 948 aa11.16□□□□□ -0.62
ATP2B4-203ENST00000357681 ATP6V1DQ9Y5K8 247 aa11.16□□□□□ -0.62
ATP2B4-203ENST00000357681 CWC15Q9P013 229 aaKnown RBP11.15□□□□□ -0.62
ATP2B4-203ENST00000357681 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.62
ATP2B4-203ENST00000357681 NUDCQ9Y266 331 aa11.15□□□□□ -0.62
ATP2B4-203ENST00000357681 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.15□□□□□ -0.63
ATP2B4-203ENST00000357681 CEP162Q5TB80 1403 aa11.15□□□□□ -0.63
ATP2B4-203ENST00000357681 BAZ1AQ9NRL2 1556 aaPredicted RBP11.14□□□□□ -0.63
ATP2B4-203ENST00000357681 PDE3BQ13370 1112 aa11.14□□□□□ -0.63
ATP2B4-203ENST00000357681 SUPT16HQ9Y5B9 1047 aaKnown RBP11.14□□□□□ -0.63
ATP2B4-203ENST00000357681 FANCIQ9NVI1 1328 aa11.14□□□□□ -0.63
ATP2B4-203ENST00000357681 MIER1Q8N108 512 aa11.14□□□□□ -0.63
ATP2B4-203ENST00000357681 IPO9Q96P70 1041 aaKnown RBP11.14□□□□□ -0.63
ATP2B4-203ENST00000357681 KNSTRNQ9Y448 316 aa11.13□□□□□ -0.63
ATP2B4-203ENST00000357681 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
ATP2B4-203ENST00000357681 IPO8O15397 1037 aaKnown RBP11.13□□□□□ -0.63
ATP2B4-203ENST00000357681 ACBD3Q9H3P7 528 aa11.13□□□□□ -0.63
ATP2B4-203ENST00000357681 DRC7Q8IY82 874 aa11.12□□□□□ -0.63
ATP2B4-203ENST00000357681 TSPY4P0CV99 314 aa11.11□□□□□ -0.63
ATP2B4-203ENST00000357681 TSPY10P0CW01 314 aa11.11□□□□□ -0.63
ATP2B4-203ENST00000357681 MAPK8IP3Q9UPT6 1336 aa11.11□□□□□ -0.63
ATP2B4-203ENST00000357681 CDR1P51861 262 aa11.1□□□□□ -0.63
ATP2B4-203ENST00000357681 TNIKQ9UKE5 1360 aa11.1□□□□□ -0.63
ATP2B4-203ENST00000357681 TPM3P06753 285 aa11.1□□□□□ -0.63
ATP2B4-203ENST00000357681 RBM19Q9Y4C8 960 aaKnown RBP11.1□□□□□ -0.63
ATP2B4-203ENST00000357681 TSPYL1Q9H0U9 437 aa11.1□□□□□ -0.63
ATP2B4-203ENST00000357681 ESF1Q9H501 851 aaKnown RBP11.1□□□□□ -0.63
ATP2B4-203ENST00000357681 HMMRO75330 724 aa11.1□□□□□ -0.63
ATP2B4-203ENST00000357681 CAVIN1Q6NZI2 390 aaKnown RBP11.09□□□□□ -0.63
ATP2B4-203ENST00000357681 PMFBP1Q8TBY8 1022 aa11.09□□□□□ -0.63
ATP2B4-203ENST00000357681 RB1CC1Q8TDY2 1594 aa11.09□□□□□ -0.63
ATP2B4-203ENST00000357681 KIF16BQ96L93 1317 aa11.09□□□□□ -0.63
ATP2B4-203ENST00000357681 TPM2P07951 284 aa11.08□□□□□ -0.64
ATP2B4-203ENST00000357681 ARXQ96QS3 562 aa11.07□□□□□ -0.64
ATP2B4-203ENST00000357681 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
ATP2B4-203ENST00000357681 NOC3LQ8WTT2 800 aaKnown RBP11.07□□□□□ -0.64
ATP2B4-203ENST00000357681 ARGLU1Q9NWB6 273 aaPredicted RBP11.06□□□□□ -0.64
ATP2B4-203ENST00000357681 USP8P40818 1118 aa11.05□□□□□ -0.64
ATP2B4-203ENST00000357681 RALBP1Q15311 655 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms