RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 CENPBP07199 599 aaPredicted RBP22.78■■□□□ 1.24
USP6-202ENST00000357482 ERICH6Q7L0X2 663 aa22.75■■□□□ 1.23
USP6-202ENST00000357482 BCL11AQ9H165 835 aa22.74■■□□□ 1.23
USP6-202ENST00000357482 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
USP6-202ENST00000357482 NUP160Q12769 1436 aa22.71■■□□□ 1.23
USP6-202ENST00000357482 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
USP6-202ENST00000357482 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
USP6-202ENST00000357482 PRKCSHP14314 528 aaPredicted RBP22.66■■□□□ 1.22
USP6-202ENST00000357482 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
USP6-202ENST00000357482 ERCC6L2Q5T890 1561 aa22.59■■□□□ 1.21
USP6-202ENST00000357482 IGF1RP08069 1367 aa22.59■■□□□ 1.21
USP6-202ENST00000357482 CUL7Q14999 1698 aa22.57■■□□□ 1.2
USP6-202ENST00000357482 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
USP6-202ENST00000357482 GTF3C3Q9Y5Q9 886 aa22.53■■□□□ 1.2
USP6-202ENST00000357482 RUSC2Q8N2Y8 1516 aa22.52■■□□□ 1.2
USP6-202ENST00000357482 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
USP6-202ENST00000357482 PRG4Q92954 1404 aaPredicted RBP22.52■■□□□ 1.2
USP6-202ENST00000357482 JPH4Q96JJ6 628 aa22.52■■□□□ 1.2
USP6-202ENST00000357482 NEUROD1Q13562 356 aa22.49■■□□□ 1.19
USP6-202ENST00000357482 CARMIL1Q5VZK9 1371 aa22.48■■□□□ 1.19
USP6-202ENST00000357482 KIAA0586Q9BVV6 1533 aa22.44■■□□□ 1.18
USP6-202ENST00000357482 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.18
USP6-202ENST00000357482 APLP2Q06481 763 aa22.38■■□□□ 1.17
USP6-202ENST00000357482 RAPGEF2Q9Y4G8 1499 aa22.31■■□□□ 1.16
USP6-202ENST00000357482 IQGAP2Q13576 1575 aa22.29■■□□□ 1.16
USP6-202ENST00000357482 NPM1P06748 294 aaKnown RBP eCLIP22.26■■□□□ 1.15
USP6-202ENST00000357482 CARMIL2Q6F5E8 1435 aa22.26■■□□□ 1.15
USP6-202ENST00000357482 ANP32EQ9BTT0 268 aa22.22■■□□□ 1.15
USP6-202ENST00000357482 PTPRGP23470 1445 aa22.21■■□□□ 1.15
USP6-202ENST00000357482 ADCY10Q96PN6 1610 aa22.19■■□□□ 1.14
USP6-202ENST00000357482 TNIKQ9UKE5 1360 aa22.18■■□□□ 1.14
USP6-202ENST00000357482 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
USP6-202ENST00000357482 DISP1Q96F81 1524 aa22.12■■□□□ 1.13
USP6-202ENST00000357482 UGGT2Q9NYU1 1516 aa22.12■■□□□ 1.13
USP6-202ENST00000357482 PRXQ9BXM0 1461 aa22.11■■□□□ 1.13
USP6-202ENST00000357482 MAPKBP1O60336 1514 aa22.09■■□□□ 1.13
USP6-202ENST00000357482 KIF13AQ9H1H9 1805 aa22.09■■□□□ 1.13
USP6-202ENST00000357482 FAM69CQ0P6D2 419 aa22.08■■□□□ 1.13
USP6-202ENST00000357482 KIAA0556O60303 1618 aa22.07■■□□□ 1.12
USP6-202ENST00000357482 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
USP6-202ENST00000357482 ABCC10Q5T3U5 1492 aa22.05■■□□□ 1.12
USP6-202ENST00000357482 UACAQ9BZF9 1416 aa22.03■■□□□ 1.12
USP6-202ENST00000357482 ABCC2Q92887 1545 aa22.03■■□□□ 1.12
USP6-202ENST00000357482 DIP2BQ9P265 1576 aa22.02■■□□□ 1.11
USP6-202ENST00000357482 GOLGA3Q08378 1498 aa22.01■■□□□ 1.11
USP6-202ENST00000357482 EEA1Q15075 1411 aa22■■□□□ 1.11
USP6-202ENST00000357482 UHRF1BP1LA0JNW5 1464 aa21.99■■□□□ 1.11
USP6-202ENST00000357482 ASXL2Q76L83 1435 aa21.94■■□□□ 1.1
USP6-202ENST00000357482 PLB1Q6P1J6 1458 aa21.92■■□□□ 1.1
USP6-202ENST00000357482 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
USP6-202ENST00000357482 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
USP6-202ENST00000357482 TSPOAP1O95153 1857 aa21.89■■□□□ 1.1
USP6-202ENST00000357482 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.1
USP6-202ENST00000357482 ZCCHC11Q5TAX3 1644 aaKnown RBP21.89■■□□□ 1.09
USP6-202ENST00000357482 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
USP6-202ENST00000357482 ABCA8O94911 1581 aa21.83■■□□□ 1.08
USP6-202ENST00000357482 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
USP6-202ENST00000357482 EHMT2Q96KQ7 1210 aa21.82■■□□□ 1.08
USP6-202ENST00000357482 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
USP6-202ENST00000357482 GLI2P10070 1586 aa21.8■■□□□ 1.08
USP6-202ENST00000357482 KIF21BO75037 1637 aa21.8■■□□□ 1.08
USP6-202ENST00000357482 EPRSP07814 1512 aaKnown RBP21.79■■□□□ 1.08
USP6-202ENST00000357482 KDM6BO15054 1643 aa21.79■■□□□ 1.08
USP6-202ENST00000357482 SAMD9Q5K651 1589 aa21.78■■□□□ 1.08
USP6-202ENST00000357482 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
USP6-202ENST00000357482 WDR7Q9Y4E6 1490 aa21.77■■□□□ 1.08
USP6-202ENST00000357482 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
USP6-202ENST00000357482 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
USP6-202ENST00000357482 KCNH8Q96L42 1107 aa21.73■■□□□ 1.07
USP6-202ENST00000357482 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
USP6-202ENST00000357482 MAP3K4Q9Y6R4 1608 aa21.71■■□□□ 1.07
USP6-202ENST00000357482 PPRC1Q5VV67 1664 aaKnown RBP21.7■■□□□ 1.06
USP6-202ENST00000357482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
USP6-202ENST00000357482 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
USP6-202ENST00000357482 RAPGEF6Q8TEU7 1601 aa21.68■■□□□ 1.06
USP6-202ENST00000357482 TEX14Q8IWB6 1497 aa21.67■■□□□ 1.06
USP6-202ENST00000357482 ATP10BO94823 1461 aa21.66■■□□□ 1.06
USP6-202ENST00000357482 EFCAB5A4FU69 1503 aa21.65■■□□□ 1.06
USP6-202ENST00000357482 CD109Q6YHK3 1445 aa21.62■■□□□ 1.05
USP6-202ENST00000357482 CFAP43Q8NDM7 1665 aa21.61■■□□□ 1.05
USP6-202ENST00000357482 NUP153P49790 1475 aaKnown RBP21.58■■□□□ 1.05
USP6-202ENST00000357482 MAGI3Q5TCQ9 1506 aa21.55■■□□□ 1.04
USP6-202ENST00000357482 COL17A1Q9UMD9 1497 aaPredicted RBP21.54■■□□□ 1.04
USP6-202ENST00000357482 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
USP6-202ENST00000357482 PLEKHD1A6NEE1 506 aa21.5■■□□□ 1.03
USP6-202ENST00000357482 ARHGAP35Q9NRY4 1499 aa21.49■■□□□ 1.03
USP6-202ENST00000357482 ABCA9Q8IUA7 1624 aa21.48■■□□□ 1.03
USP6-202ENST00000357482 FMN1Q68DA7 1419 aa21.48■■□□□ 1.03
USP6-202ENST00000357482 TSHZ2Q9NRE2 1034 aa21.47■■□□□ 1.03
USP6-202ENST00000357482 CDK13Q14004 1512 aaKnown RBP21.44■■□□□ 1.02
USP6-202ENST00000357482 MYT1LQ9UL68 1186 aa21.43■■□□□ 1.02
USP6-202ENST00000357482 HECW1Q76N89 1606 aa21.42■■□□□ 1.02
USP6-202ENST00000357482 KDM4FA0A1W2PPD8 638 aa21.4■■□□□ 1.02
USP6-202ENST00000357482 ARAP3Q8WWN8 1544 aa21.37■■□□□ 1.01
USP6-202ENST00000357482 PHLDB1Q86UU1 1377 aa21.36■■□□□ 1.01
USP6-202ENST00000357482 NEO1Q92859 1461 aa21.36■■□□□ 1.01
USP6-202ENST00000357482 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.34■■□□□ 1.01
USP6-202ENST00000357482 SLC24A1O60721 1099 aa21.34■■□□□ 1.01
USP6-202ENST00000357482 CDK11AQ9UQ88 783 aaPredicted RBP21.34■■□□□ 1.01
USP6-202ENST00000357482 ADGRL1O94910 1474 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms