RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
GM2A-201ENST00000357164 KANK4Q5T7N3 995 aaPredicted RBP12.19□□□□□ -0.46
GM2A-201ENST00000357164 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
GM2A-201ENST00000357164 RAB3GAP2Q9H2M9 1393 aa12.18□□□□□ -0.46
GM2A-201ENST00000357164 NCOA2Q15596 1464 aa12.17□□□□□ -0.46
GM2A-201ENST00000357164 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
GM2A-201ENST00000357164 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
GM2A-201ENST00000357164 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
GM2A-201ENST00000357164 LRRIQ1Q96JM4 1722 aa12.14□□□□□ -0.47
GM2A-201ENST00000357164 ERICH6BQ5W0A0 696 aa12.12□□□□□ -0.47
GM2A-201ENST00000357164 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
GM2A-201ENST00000357164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.11□□□□□ -0.47
GM2A-201ENST00000357164 BCANQ96GW7 911 aa12.11□□□□□ -0.47
GM2A-201ENST00000357164 SETD5Q9C0A6 1442 aa12.1□□□□□ -0.47
GM2A-201ENST00000357164 CUX1P39880 1505 aa12.09□□□□□ -0.47
GM2A-201ENST00000357164 LRRC9Q6ZRR7 1453 aa12.09□□□□□ -0.47
GM2A-201ENST00000357164 DENND4BO75064 1496 aaPredicted RBP12.08□□□□□ -0.48
GM2A-201ENST00000357164 DEKP35659 375 aaKnown RBP12.08□□□□□ -0.48
GM2A-201ENST00000357164 ITGAEP38570 1179 aa12.06□□□□□ -0.48
GM2A-201ENST00000357164 ERICH6Q7L0X2 663 aa12.06□□□□□ -0.48
GM2A-201ENST00000357164 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
GM2A-201ENST00000357164 ANO8Q9HCE9 1232 aaPredicted RBP12.05□□□□□ -0.48
GM2A-201ENST00000357164 PCF11O94913 1555 aaKnown RBP12.04□□□□□ -0.48
GM2A-201ENST00000357164 GCC2Q8IWJ2 1684 aa12.04□□□□□ -0.48
GM2A-201ENST00000357164 FHAD1B1AJZ9 1412 aa12.04□□□□□ -0.48
GM2A-201ENST00000357164 HECW1Q76N89 1606 aa12.04□□□□□ -0.48
GM2A-201ENST00000357164 PTPN23Q9H3S7 1636 aa12.04□□□□□ -0.48
GM2A-201ENST00000357164 WASHC2AQ641Q2 1341 aa12.03□□□□□ -0.48
GM2A-201ENST00000357164 RNF123Q5XPI4 1314 aa12.03□□□□□ -0.48
GM2A-201ENST00000357164 PHLDB1Q86UU1 1377 aa12.02□□□□□ -0.48
GM2A-201ENST00000357164 DDX10Q13206 875 aaKnown RBP11.99□□□□□ -0.49
GM2A-201ENST00000357164 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
GM2A-201ENST00000357164 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
GM2A-201ENST00000357164 ARHGEF11O15085 1522 aa11.96□□□□□ -0.5
GM2A-201ENST00000357164 C11orf95C9JLR9 678 aaPredicted RBP11.96□□□□□ -0.5
GM2A-201ENST00000357164 SALL2Q9Y467 1007 aaPredicted RBP11.95□□□□□ -0.5
GM2A-201ENST00000357164 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
GM2A-201ENST00000357164 UBE2Q2Q8WVN8 375 aa11.95□□□□□ -0.5
GM2A-201ENST00000357164 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
GM2A-201ENST00000357164 PPP4R2Q9NY27 417 aa11.93□□□□□ -0.5
GM2A-201ENST00000357164 CTTNBP2Q8WZ74 1663 aa11.93□□□□□ -0.5
GM2A-201ENST00000357164 HFM1A2PYH4 1435 aa11.93□□□□□ -0.5
GM2A-201ENST00000357164 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
GM2A-201ENST00000357164 SIN3AQ96ST3 1273 aa11.92□□□□□ -0.5
GM2A-201ENST00000357164 HMGXB3Q12766 1538 aa11.92□□□□□ -0.5
GM2A-201ENST00000357164 E9PCH4 1651 aa11.91□□□□□ -0.5
GM2A-201ENST00000357164 UACAQ9BZF9 1416 aa11.91□□□□□ -0.5
GM2A-201ENST00000357164 NCOA1Q15788 1441 aa11.91□□□□□ -0.5
GM2A-201ENST00000357164 FYCO1Q9BQS8 1478 aa11.9□□□□□ -0.5
GM2A-201ENST00000357164 SPATA31E1Q6ZUB1 1445 aa11.9□□□□□ -0.5
GM2A-201ENST00000357164 CNTLNQ9NXG0 1405 aa11.9□□□□□ -0.5
GM2A-201ENST00000357164 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
GM2A-201ENST00000357164 NOP58Q9Y2X3 529 aaKnown RBP11.89□□□□□ -0.51
GM2A-201ENST00000357164 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
GM2A-201ENST00000357164 VIRMAQ69YN4 1812 aaKnown RBP11.89□□□□□ -0.51
GM2A-201ENST00000357164 NEFLP07196 543 aa11.89□□□□□ -0.51
GM2A-201ENST00000357164 SMG6Q86US8 1419 aaKnown RBP11.89□□□□□ -0.51
GM2A-201ENST00000357164 KDM6BO15054 1643 aa11.89□□□□□ -0.51
GM2A-201ENST00000357164 SAMD9Q5K651 1589 aa11.87□□□□□ -0.51
GM2A-201ENST00000357164 ZBED9Q6R2W3 1325 aa11.87□□□□□ -0.51
GM2A-201ENST00000357164 CCDC18Q5T9S5 1454 aa11.87□□□□□ -0.51
GM2A-201ENST00000357164 BCORL1Q5H9F3 1711 aa11.87□□□□□ -0.51
GM2A-201ENST00000357164 EFCAB5A4FU69 1503 aa11.86□□□□□ -0.51
GM2A-201ENST00000357164 KIF27Q86VH2 1401 aa11.86□□□□□ -0.51
GM2A-201ENST00000357164 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
GM2A-201ENST00000357164 ANP32CO43423 234 aa11.85□□□□□ -0.51
GM2A-201ENST00000357164 NAIPQ13075 1403 aa11.85□□□□□ -0.51
GM2A-201ENST00000357164 FGD5Q6ZNL6 1462 aa11.85□□□□□ -0.51
GM2A-201ENST00000357164 CNGB1Q14028 1251 aaPredicted RBP11.85□□□□□ -0.51
GM2A-201ENST00000357164 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
GM2A-201ENST00000357164 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
GM2A-201ENST00000357164 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
GM2A-201ENST00000357164 CFTRP13569 1480 aa11.83□□□□□ -0.52
GM2A-201ENST00000357164 TCOF1Q13428 1488 aaKnown RBP11.82□□□□□ -0.52
GM2A-201ENST00000357164 TEX14Q8IWB6 1497 aa11.82□□□□□ -0.52
GM2A-201ENST00000357164 IPO9Q96P70 1041 aaKnown RBP11.82□□□□□ -0.52
GM2A-201ENST00000357164 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
GM2A-201ENST00000357164 AKNAQ7Z591 1439 aa11.81□□□□□ -0.52
GM2A-201ENST00000357164 MBD5Q9P267 1494 aa11.81□□□□□ -0.52
GM2A-201ENST00000357164 FGD6Q6ZV73 1430 aa11.81□□□□□ -0.52
GM2A-201ENST00000357164 IGF1RP08069 1367 aa11.81□□□□□ -0.52
GM2A-201ENST00000357164 DHX29Q7Z478 1369 aaKnown RBP11.79□□□□□ -0.52
GM2A-201ENST00000357164 UGGT2Q9NYU1 1516 aa11.78□□□□□ -0.52
GM2A-201ENST00000357164 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
GM2A-201ENST00000357164 IRX6P78412 446 aaPredicted RBP11.77□□□□□ -0.53
GM2A-201ENST00000357164 SUPT6HQ7KZ85 1726 aaKnown RBP11.76□□□□□ -0.53
GM2A-201ENST00000357164 KDM5CP41229 1560 aa11.76□□□□□ -0.53
GM2A-201ENST00000357164 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
GM2A-201ENST00000357164 MAGI3Q5TCQ9 1506 aa11.75□□□□□ -0.53
GM2A-201ENST00000357164 CUL7Q14999 1698 aa11.75□□□□□ -0.53
GM2A-201ENST00000357164 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
GM2A-201ENST00000357164 HNRNPUQ00839 825 aaKnown RBP eCLIP11.74□□□□□ -0.53
GM2A-201ENST00000357164 B4GALNT3Q6L9W6 998 aa11.74□□□□□ -0.53
GM2A-201ENST00000357164 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
GM2A-201ENST00000357164 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
GM2A-201ENST00000357164 PRKRIP1Q9H875 184 aaPredicted RBP11.73□□□□□ -0.53
GM2A-201ENST00000357164 KIF14Q15058 1648 aa11.72□□□□□ -0.53
GM2A-201ENST00000357164 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
GM2A-201ENST00000357164 LRPPRCP42704 1394 aaKnown RBP11.71□□□□□ -0.53
GM2A-201ENST00000357164 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms