RNA–Protein interactions for RNA: ENST00000356508.9

PLD3-201, Transcript of phospholipase D family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLD3, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-201ENST00000356508 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
PLD3-201ENST00000356508 CEP162Q5TB80 1403 aa24.43■■□□□ 1.5
PLD3-201ENST00000356508 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
PLD3-201ENST00000356508 CLIP1P30622 1438 aa24.36■■□□□ 1.49
PLD3-201ENST00000356508 PPARGC1BQ86YN6 1023 aaKnown RBP24.33■■□□□ 1.49
PLD3-201ENST00000356508 CTTNBP2Q8WZ74 1663 aa24.33■■□□□ 1.48
PLD3-201ENST00000356508 KIAA0586Q9BVV6 1533 aa24.29■■□□□ 1.48
PLD3-201ENST00000356508 NUP160Q12769 1436 aa24.27■■□□□ 1.48
PLD3-201ENST00000356508 CHD1O14646 1710 aa24.25■■□□□ 1.47
PLD3-201ENST00000356508 IQGAP2Q13576 1575 aa24.25■■□□□ 1.47
PLD3-201ENST00000356508 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
PLD3-201ENST00000356508 PCGF6Q9BYE7 350 aa24.23■■□□□ 1.47
PLD3-201ENST00000356508 ARHGAP35Q9NRY4 1499 aa24.18■■□□□ 1.46
PLD3-201ENST00000356508 P3H3Q8IVL6 736 aa24.16■■□□□ 1.46
PLD3-201ENST00000356508 JPH4Q96JJ6 628 aa24.16■■□□□ 1.46
PLD3-201ENST00000356508 EFCAB5A4FU69 1503 aa24.16■■□□□ 1.46
PLD3-201ENST00000356508 OSCARQ8IYS5 282 aa24.12■■□□□ 1.45
PLD3-201ENST00000356508 UGGT2Q9NYU1 1516 aa24.12■■□□□ 1.45
PLD3-201ENST00000356508 ARAP1Q96P48 1450 aa24.1■■□□□ 1.45
PLD3-201ENST00000356508 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
PLD3-201ENST00000356508 VPS8Q8N3P4 1428 aa24.07■■□□□ 1.44
PLD3-201ENST00000356508 CARMIL2Q6F5E8 1435 aa24.07■■□□□ 1.44
PLD3-201ENST00000356508 SAMD9Q5K651 1589 aa24.06■■□□□ 1.44
PLD3-201ENST00000356508 FHOD3Q2V2M9 1422 aa24.05■■□□□ 1.44
PLD3-201ENST00000356508 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
PLD3-201ENST00000356508 DISP1Q96F81 1524 aa24.01■■□□□ 1.43
PLD3-201ENST00000356508 FMN1Q68DA7 1419 aa24■■□□□ 1.43
PLD3-201ENST00000356508 PRG4Q92954 1404 aaPredicted RBP24■■□□□ 1.43
PLD3-201ENST00000356508 TRIM26Q12899 539 aaPredicted RBP23.99■■□□□ 1.43
PLD3-201ENST00000356508 APLP2Q06481 763 aa23.98■■□□□ 1.43
PLD3-201ENST00000356508 KIAA0556O60303 1618 aa23.98■■□□□ 1.43
PLD3-201ENST00000356508 TTBK1Q5TCY1 1321 aaPredicted RBP23.95■■□□□ 1.42
PLD3-201ENST00000356508 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
PLD3-201ENST00000356508 ATP1B4Q9UN42 357 aaPredicted RBP23.92■■□□□ 1.42
PLD3-201ENST00000356508 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
PLD3-201ENST00000356508 CASKIN1Q8WXD9 1431 aa23.86■■□□□ 1.41
PLD3-201ENST00000356508 PTPRGP23470 1445 aa23.84■■□□□ 1.41
PLD3-201ENST00000356508 FYCO1Q9BQS8 1478 aa23.83■■□□□ 1.41
PLD3-201ENST00000356508 PCF11O94913 1555 aaKnown RBP23.81■■□□□ 1.4
PLD3-201ENST00000356508 ERCC6L2Q5T890 1561 aa23.77■■□□□ 1.4
PLD3-201ENST00000356508 HECW1Q76N89 1606 aa23.73■■□□□ 1.39
PLD3-201ENST00000356508 PLB1Q6P1J6 1458 aa23.72■■□□□ 1.39
PLD3-201ENST00000356508 RAPGEF6Q8TEU7 1601 aa23.71■■□□□ 1.39
PLD3-201ENST00000356508 MAP3K1Q13233 1512 aa23.71■■□□□ 1.39
PLD3-201ENST00000356508 CCDC18Q5T9S5 1454 aa23.69■■□□□ 1.38
PLD3-201ENST00000356508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
PLD3-201ENST00000356508 HNRNPUL2Q1KMD3 747 aaKnown RBP23.68■■□□□ 1.38
PLD3-201ENST00000356508 UACAQ9BZF9 1416 aa23.68■■□□□ 1.38
PLD3-201ENST00000356508 TIAM1Q13009 1591 aa23.67■■□□□ 1.38
PLD3-201ENST00000356508 ARID3CA6NKF2 412 aa23.67■■□□□ 1.38
PLD3-201ENST00000356508 ABCA8O94911 1581 aa23.66■■□□□ 1.38
PLD3-201ENST00000356508 KANK4Q5T7N3 995 aaPredicted RBP23.65■■□□□ 1.38
PLD3-201ENST00000356508 EPRSP07814 1512 aaKnown RBP23.65■■□□□ 1.38
PLD3-201ENST00000356508 NUP153P49790 1475 aaKnown RBP23.65■■□□□ 1.38
PLD3-201ENST00000356508 CDK11AQ9UQ88 783 aaPredicted RBP23.63■■□□□ 1.37
PLD3-201ENST00000356508 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
PLD3-201ENST00000356508 MTUS2Q5JR59 1369 aa23.6■■□□□ 1.37
PLD3-201ENST00000356508 CFAP43Q8NDM7 1665 aa23.6■■□□□ 1.37
PLD3-201ENST00000356508 LRRC9Q6ZRR7 1453 aa23.59■■□□□ 1.37
PLD3-201ENST00000356508 CDK13Q14004 1512 aaKnown RBP23.57■■□□□ 1.36
PLD3-201ENST00000356508 ABCC2Q92887 1545 aa23.57■■□□□ 1.36
PLD3-201ENST00000356508 UHRF1BP1LA0JNW5 1464 aa23.55■■□□□ 1.36
PLD3-201ENST00000356508 LRRIQ1Q96JM4 1722 aa23.55■■□□□ 1.36
PLD3-201ENST00000356508 ATP10BO94823 1461 aa23.53■■□□□ 1.36
PLD3-201ENST00000356508 PLEKHD1A6NEE1 506 aa23.53■■□□□ 1.36
PLD3-201ENST00000356508 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
PLD3-201ENST00000356508 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
PLD3-201ENST00000356508 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
PLD3-201ENST00000356508 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
PLD3-201ENST00000356508 NPM1P06748 294 aaKnown RBP eCLIP23.48■■□□□ 1.35
PLD3-201ENST00000356508 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
PLD3-201ENST00000356508 EHBP1L1Q8N3D4 1523 aa23.48■■□□□ 1.35
PLD3-201ENST00000356508 KDM5BQ9UGL1 1544 aa23.44■■□□□ 1.34
PLD3-201ENST00000356508 ADCY10Q96PN6 1610 aa23.43■■□□□ 1.34
PLD3-201ENST00000356508 TROQ12816 1431 aaPredicted RBP23.43■■□□□ 1.34
PLD3-201ENST00000356508 MAGI3Q5TCQ9 1506 aa23.42■■□□□ 1.34
PLD3-201ENST00000356508 SUPT6HQ7KZ85 1726 aaKnown RBP23.39■■□□□ 1.33
PLD3-201ENST00000356508 NCOA2Q15596 1464 aa23.38■■□□□ 1.33
PLD3-201ENST00000356508 ZCCHC11Q5TAX3 1644 aaKnown RBP23.38■■□□□ 1.33
PLD3-201ENST00000356508 PHLDB1Q86UU1 1377 aa23.34■■□□□ 1.33
PLD3-201ENST00000356508 KCNH8Q96L42 1107 aa23.31■■□□□ 1.32
PLD3-201ENST00000356508 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
PLD3-201ENST00000356508 KIF14Q15058 1648 aa23.29■■□□□ 1.32
PLD3-201ENST00000356508 MYOM3Q5VTT5 1437 aa23.28■■□□□ 1.32
PLD3-201ENST00000356508 RRBP1Q9P2E9 1410 aaKnown RBP23.27■■□□□ 1.32
PLD3-201ENST00000356508 WDR7Q9Y4E6 1490 aa23.26■■□□□ 1.31
PLD3-201ENST00000356508 ASXL2Q76L83 1435 aa23.25■■□□□ 1.31
PLD3-201ENST00000356508 FAM50AQ14320 339 aaKnown RBP23.23■■□□□ 1.31
PLD3-201ENST00000356508 FGD6Q6ZV73 1430 aa23.22■■□□□ 1.31
PLD3-201ENST00000356508 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
PLD3-201ENST00000356508 NEUROD1Q13562 356 aa23.21■■□□□ 1.31
PLD3-201ENST00000356508 CFDP1Q9UEE9 299 aaPredicted RBP23.2■■□□□ 1.3
PLD3-201ENST00000356508 MIA2Q96PC5 1412 aa23.2■■□□□ 1.3
PLD3-201ENST00000356508 ABCC10Q5T3U5 1492 aa23.19■■□□□ 1.3
PLD3-201ENST00000356508 CENPBP07199 599 aaPredicted RBP23.18■■□□□ 1.3
PLD3-201ENST00000356508 GPATCH8Q9UKJ3 1502 aaKnown RBP23.17■■□□□ 1.3
PLD3-201ENST00000356508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.15■■□□□ 1.33e-7■■■□□ 17.4
PLD3-201ENST00000356508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.15■■□□□ 1.3
PLD3-201ENST00000356508 MAPKBP1O60336 1514 aa23.14■■□□□ 1.3
PLD3-201ENST00000356508 ITSN2Q9NZM3 1697 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms