RNA–Protein interactions for RNA: ENST00000356444.6

SEMA4D-202, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA4D, Length 4,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-202ENST00000356444 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
SEMA4D-202ENST00000356444 CLIP1P30622 1438 aa13.18□□□□□ -0.3
SEMA4D-202ENST00000356444 BECN1Q14457 450 aa13.17□□□□□ -0.3
SEMA4D-202ENST00000356444 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
SEMA4D-202ENST00000356444 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
SEMA4D-202ENST00000356444 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
SEMA4D-202ENST00000356444 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
SEMA4D-202ENST00000356444 ARID4BQ4LE39 1312 aaPredicted RBP13.1□□□□□ -0.31
SEMA4D-202ENST00000356444 RGS3P49796 1198 aa13.1□□□□□ -0.31
SEMA4D-202ENST00000356444 TNNT2P45379 298 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-202ENST00000356444 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-202ENST00000356444 ZNF777Q9ULD5 760 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-202ENST00000356444 WDR43Q15061 677 aaKnown RBP eCLIP13.07□□□□□ -0.32
SEMA4D-202ENST00000356444 TNIKQ9UKE5 1360 aa13.06□□□□□ -0.32
SEMA4D-202ENST00000356444 KDM2AQ9Y2K7 1162 aa13.05□□□□□ -0.32
SEMA4D-202ENST00000356444 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
SEMA4D-202ENST00000356444 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
SEMA4D-202ENST00000356444 NCLP19338 710 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-202ENST00000356444 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.32
SEMA4D-202ENST00000356444 RRP7BPQ9NSQ0 103 aa13.02□□□□□ -0.33
SEMA4D-202ENST00000356444 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-202ENST00000356444 GOLGA6L22H0YM25 854 aa13□□□□□ -0.33
SEMA4D-202ENST00000356444 DNTTIP2Q5QJE6 756 aaKnown RBP13□□□□□ -0.33
SEMA4D-202ENST00000356444 GOLGA3Q08378 1498 aa12.99□□□□□ -0.33
SEMA4D-202ENST00000356444 RSF1Q96T23 1441 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-202ENST00000356444 L1TD1Q5T7N2 865 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-202ENST00000356444 PTMAP06454 111 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-202ENST00000356444 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
SEMA4D-202ENST00000356444 SLC24A1O60721 1099 aa12.97□□□□□ -0.33
SEMA4D-202ENST00000356444 ABCC9O60706 1549 aa12.95□□□□□ -0.34
SEMA4D-202ENST00000356444 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-202ENST00000356444 EEA1Q15075 1411 aa12.94□□□□□ -0.34
SEMA4D-202ENST00000356444 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
SEMA4D-202ENST00000356444 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-202ENST00000356444 TIMELESSQ9UNS1 1208 aa12.93□□□□□ -0.34
SEMA4D-202ENST00000356444 MTUS2Q5JR59 1369 aa12.92□□□□□ -0.34
SEMA4D-202ENST00000356444 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
SEMA4D-202ENST00000356444 USP35Q9P2H5 1018 aa12.92□□□□□ -0.34
SEMA4D-202ENST00000356444 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-202ENST00000356444 HSP90AA2PQ14568 343 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-202ENST00000356444 ARID3AQ99856 593 aa12.91□□□□□ -0.34
SEMA4D-202ENST00000356444 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
SEMA4D-202ENST00000356444 GSE1Q14687 1217 aa12.89□□□□□ -0.35
SEMA4D-202ENST00000356444 AMER1Q5JTC6 1135 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-202ENST00000356444 CDK11BP21127 795 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-202ENST00000356444 CCNB3Q8WWL7 1395 aa12.88□□□□□ -0.35
SEMA4D-202ENST00000356444 MSNP26038 577 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-202ENST00000356444 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-202ENST00000356444 TPRNQ4KMQ1 711 aa12.87□□□□□ -0.35
SEMA4D-202ENST00000356444 SLC4A3P48751 1232 aa12.86□□□□□ -0.35
SEMA4D-202ENST00000356444 IL27Q8NEV9 243 aa12.86□□□□□ -0.35
SEMA4D-202ENST00000356444 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
SEMA4D-202ENST00000356444 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
SEMA4D-202ENST00000356444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.84□□□□□ -0.35
SEMA4D-202ENST00000356444 CARD11Q9BXL7 1154 aa12.84□□□□□ -0.35
SEMA4D-202ENST00000356444 PPP1R15AO75807 674 aaPredicted RBP12.83□□□□□ -0.35
SEMA4D-202ENST00000356444 PLCB2Q00722 1185 aa12.83□□□□□ -0.35
SEMA4D-202ENST00000356444 HSP90AB1P08238 724 aaKnown RBP12.83□□□□□ -0.36
SEMA4D-202ENST00000356444 FBLN2P98095 1184 aa12.83□□□□□ -0.36
SEMA4D-202ENST00000356444 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
SEMA4D-202ENST00000356444 KANK4Q5T7N3 995 aaPredicted RBP12.83□□□□□ -0.36
SEMA4D-202ENST00000356444 GOLGA6L3A6NEY3 463 aa12.82□□□□□ -0.36
SEMA4D-202ENST00000356444 NUDCQ9Y266 331 aa12.82□□□□□ -0.36
SEMA4D-202ENST00000356444 PDE4AP27815 886 aa12.82□□□□□ -0.36
SEMA4D-202ENST00000356444 SOGA1O94964 1423 aa12.82□□□□□ -0.36
SEMA4D-202ENST00000356444 MYH16Q9H6N6 1097 aa12.81□□□□□ -0.36
SEMA4D-202ENST00000356444 CEP164Q9UPV0 1460 aa12.81□□□□□ -0.36
SEMA4D-202ENST00000356444 ZBTB7CA1YPR0 619 aa12.8□□□□□ -0.36
SEMA4D-202ENST00000356444 RGL3Q3MIN7 710 aa12.8□□□□□ -0.36
SEMA4D-202ENST00000356444 CC2D1BQ5T0F9 858 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-202ENST00000356444 HSCBQ8IWL3 235 aa12.8□□□□□ -0.36
SEMA4D-202ENST00000356444 CHGAP10645 457 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-202ENST00000356444 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-202ENST00000356444 KNSTRNQ9Y448 316 aa12.78□□□□□ -0.36
SEMA4D-202ENST00000356444 RAB3GAP2Q9H2M9 1393 aa12.77□□□□□ -0.36
SEMA4D-202ENST00000356444 SETD5Q9C0A6 1442 aa12.77□□□□□ -0.36
SEMA4D-202ENST00000356444 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-202ENST00000356444 WRNQ14191 1432 aaPredicted RBP eCLIP12.76□□□□□ -0.37
SEMA4D-202ENST00000356444 DHX57Q6P158 1386 aaKnown RBP12.76□□□□□ -0.37
SEMA4D-202ENST00000356444 BRPF3Q9ULD4 1205 aa12.76□□□□□ -0.37
SEMA4D-202ENST00000356444 VPS8Q8N3P4 1428 aa12.75□□□□□ -0.37
SEMA4D-202ENST00000356444 TSPY4P0CV99 314 aa12.75□□□□□ -0.37
SEMA4D-202ENST00000356444 TSPY10P0CW01 314 aa12.75□□□□□ -0.37
SEMA4D-202ENST00000356444 BAZ1BQ9UIG0 1483 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-202ENST00000356444 PKNOX2Q96KN3 472 aa12.74□□□□□ -0.37
SEMA4D-202ENST00000356444 MSH5O43196 834 aa12.74□□□□□ -0.37
SEMA4D-202ENST00000356444 EXOC6Q8TAG9 804 aa12.71□□□□□ -0.37
SEMA4D-202ENST00000356444 CHAF1AQ13111 956 aaPredicted RBP12.7□□□□□ -0.38
SEMA4D-202ENST00000356444 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
SEMA4D-202ENST00000356444 NFKBIBQ15653 356 aa12.69□□□□□ -0.38
SEMA4D-202ENST00000356444 FOXD1Q16676 465 aa12.68□□□□□ -0.38
SEMA4D-202ENST00000356444 RB1CC1Q8TDY2 1594 aa12.67□□□□□ -0.38
SEMA4D-202ENST00000356444 ZBED9Q6R2W3 1325 aa12.67□□□□□ -0.38
SEMA4D-202ENST00000356444 PRKRIP1Q9H875 184 aaPredicted RBP12.66□□□□□ -0.38
SEMA4D-202ENST00000356444 PLIN1O60240 522 aa12.66□□□□□ -0.38
SEMA4D-202ENST00000356444 CASC1Q6TDU7 716 aa12.66□□□□□ -0.38
SEMA4D-202ENST00000356444 FAM161AQ3B820 660 aa12.65□□□□□ -0.39
SEMA4D-202ENST00000356444 KIAA2012Q0VF49 1180 aa12.64□□□□□ -0.39
SEMA4D-202ENST00000356444 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
SEMA4D-202ENST00000356444 CFAP53Q96M91 514 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms