RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
NPAS3-202ENST00000356141 FBLN2P98095 1184 aa26.74■■□□□ 1.87
NPAS3-202ENST00000356141 WDR97A6NE52 1622 aa26.66■■□□□ 1.86
NPAS3-202ENST00000356141 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
NPAS3-202ENST00000356141 ABCA5Q8WWZ7 1642 aa26.64■■□□□ 1.86
NPAS3-202ENST00000356141 ZEB1P37275 1124 aaPredicted RBP26.61■■□□□ 1.85
NPAS3-202ENST00000356141 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
NPAS3-202ENST00000356141 CUL7Q14999 1698 aa26.56■■□□□ 1.84
NPAS3-202ENST00000356141 FAM50AQ14320 339 aaKnown RBP26.51■■□□□ 1.83
NPAS3-202ENST00000356141 PCF11O94913 1555 aaKnown RBP26.48■■□□□ 1.83
NPAS3-202ENST00000356141 WDR62O43379 1518 aa26.46■■□□□ 1.83
NPAS3-202ENST00000356141 PBRM1Q86U86 1689 aa26.45■■□□□ 1.83
NPAS3-202ENST00000356141 CHMP7Q8WUX9 453 aaPredicted RBP26.44■■□□□ 1.82
NPAS3-202ENST00000356141 CTTNBP2Q8WZ74 1663 aa26.44■■□□□ 1.82
NPAS3-202ENST00000356141 GRIN2BQ13224 1484 aa26.43■■□□□ 1.82
NPAS3-202ENST00000356141 SNAPC4Q5SXM2 1469 aa26.43■■□□□ 1.82
NPAS3-202ENST00000356141 IFT140Q96RY7 1462 aa26.43■■□□□ 1.82
NPAS3-202ENST00000356141 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
NPAS3-202ENST00000356141 PHLDB1Q86UU1 1377 aa26.37■■□□□ 1.81
NPAS3-202ENST00000356141 TIAM1Q13009 1591 aa26.37■■□□□ 1.81
NPAS3-202ENST00000356141 EIF4G3O43432 1585 aaKnown RBP26.35■■□□□ 1.81
NPAS3-202ENST00000356141 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
NPAS3-202ENST00000356141 CCNB3Q8WWL7 1395 aa26.34■■□□□ 1.81
NPAS3-202ENST00000356141 LRRC9Q6ZRR7 1453 aa26.33■■□□□ 1.81
NPAS3-202ENST00000356141 ADAMTS12P58397 1594 aa26.33■■□□□ 1.81
NPAS3-202ENST00000356141 MTUS2Q5JR59 1369 aa26.27■■□□□ 1.8
NPAS3-202ENST00000356141 EFCAB5A4FU69 1503 aa26.26■■□□□ 1.79
NPAS3-202ENST00000356141 FMN1Q68DA7 1419 aa26.25■■□□□ 1.79
NPAS3-202ENST00000356141 CASKIN1Q8WXD9 1431 aa26.24■■□□□ 1.79
NPAS3-202ENST00000356141 IQGAP2Q13576 1575 aa26.21■■□□□ 1.79
NPAS3-202ENST00000356141 RRBP1Q9P2E9 1410 aaKnown RBP26.2■■□□□ 1.79
NPAS3-202ENST00000356141 FYCO1Q9BQS8 1478 aa26.2■■□□□ 1.78
NPAS3-202ENST00000356141 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
NPAS3-202ENST00000356141 SAMD9Q5K651 1589 aa26.16■■□□□ 1.78
NPAS3-202ENST00000356141 CDK13Q14004 1512 aaKnown RBP26.12■■□□□ 1.77
NPAS3-202ENST00000356141 LRRIQ1Q96JM4 1722 aa26.11■■□□□ 1.77
NPAS3-202ENST00000356141 CFAP43Q8NDM7 1665 aa26.1■■□□□ 1.77
NPAS3-202ENST00000356141 CHIC2Q9UKJ5 165 aa26.09■■□□□ 1.77
NPAS3-202ENST00000356141 JPH4Q96JJ6 628 aa26.08■■□□□ 1.77
NPAS3-202ENST00000356141 SLC24A1O60721 1099 aa26.06■■□□□ 1.76
NPAS3-202ENST00000356141 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
NPAS3-202ENST00000356141 RAB3GAP2Q9H2M9 1393 aa26.05■■□□□ 1.76
NPAS3-202ENST00000356141 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
NPAS3-202ENST00000356141 KIAA0586Q9BVV6 1533 aa26.04■■□□□ 1.76
NPAS3-202ENST00000356141 SYNJ2O15056 1496 aa26.04■■□□□ 1.76
NPAS3-202ENST00000356141 MAP3K1Q13233 1512 aa26.03■■□□□ 1.76
NPAS3-202ENST00000356141 MAGI3Q5TCQ9 1506 aa26.03■■□□□ 1.76
NPAS3-202ENST00000356141 DISP1Q96F81 1524 aa26.01■■□□□ 1.75
NPAS3-202ENST00000356141 MAGI1Q96QZ7 1491 aaPredicted RBP26.01■■□□□ 1.75
NPAS3-202ENST00000356141 NCOA2Q15596 1464 aa25.99■■□□□ 1.75
NPAS3-202ENST00000356141 NEUROD1Q13562 356 aa25.98■■□□□ 1.75
NPAS3-202ENST00000356141 PLB1Q6P1J6 1458 aa25.96■■□□□ 1.75
NPAS3-202ENST00000356141 RRP7BPQ9NSQ0 103 aa25.96■■□□□ 1.75
NPAS3-202ENST00000356141 EPRSP07814 1512 aaKnown RBP25.95■■□□□ 1.74
NPAS3-202ENST00000356141 FGD6Q6ZV73 1430 aa25.95■■□□□ 1.74
NPAS3-202ENST00000356141 MYT1Q01538 1121 aa25.94■■□□□ 1.74
NPAS3-202ENST00000356141 UGGT2Q9NYU1 1516 aa25.93■■□□□ 1.74
NPAS3-202ENST00000356141 KIAA0556O60303 1618 aa25.93■■□□□ 1.74
NPAS3-202ENST00000356141 SIN3AQ96ST3 1273 aa25.92■■□□□ 1.74
NPAS3-202ENST00000356141 ZNF777Q9ULD5 760 aaPredicted RBP25.91■■□□□ 1.74
NPAS3-202ENST00000356141 ZNF644Q9H582 1327 aaPredicted RBP25.9■■□□□ 1.74
NPAS3-202ENST00000356141 PTPRKQ15262 1439 aa25.88■■□□□ 1.73
NPAS3-202ENST00000356141 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
NPAS3-202ENST00000356141 DIEXFQ68CQ4 756 aaKnown RBP25.87■■□□□ 1.73
NPAS3-202ENST00000356141 HECW1Q76N89 1606 aa25.86■■□□□ 1.73
NPAS3-202ENST00000356141 NUP153P49790 1475 aaKnown RBP25.84■■□□□ 1.73
NPAS3-202ENST00000356141 MYOM3Q5VTT5 1437 aa25.84■■□□□ 1.73
NPAS3-202ENST00000356141 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
NPAS3-202ENST00000356141 NUP160Q12769 1436 aa25.81■■□□□ 1.72
NPAS3-202ENST00000356141 ZNF316A6NFI3 1004 aaPredicted RBP25.81■■□□□ 1.72
NPAS3-202ENST00000356141 EHBP1L1Q8N3D4 1523 aa25.79■■□□□ 1.72
NPAS3-202ENST00000356141 SUPT6HQ7KZ85 1726 aaKnown RBP25.79■■□□□ 1.72
NPAS3-202ENST00000356141 CCDC18Q5T9S5 1454 aa25.79■■□□□ 1.72
NPAS3-202ENST00000356141 CARMIL2Q6F5E8 1435 aa25.79■■□□□ 1.72
NPAS3-202ENST00000356141 TRIM52Q96A61 297 aa25.74■■□□□ 1.71
NPAS3-202ENST00000356141 RAPGEF6Q8TEU7 1601 aa25.74■■□□□ 1.71
NPAS3-202ENST00000356141 CHD1O14646 1710 aa25.73■■□□□ 1.71
NPAS3-202ENST00000356141 CDK11AQ9UQ88 783 aaPredicted RBP25.73■■□□□ 1.71
NPAS3-202ENST00000356141 PTPN23Q9H3S7 1636 aa25.69■■□□□ 1.7
NPAS3-202ENST00000356141 PRKCSHP14314 528 aaPredicted RBP25.68■■□□□ 1.7
NPAS3-202ENST00000356141 FOXD1Q16676 465 aa25.68■■□□□ 1.7
NPAS3-202ENST00000356141 CFDP1Q9UEE9 299 aaPredicted RBP25.67■■□□□ 1.7
NPAS3-202ENST00000356141 PTPRGP23470 1445 aa25.66■■□□□ 1.7
NPAS3-202ENST00000356141 HIRIP3Q9BW71 556 aaPredicted RBP25.66■■□□□ 1.7
NPAS3-202ENST00000356141 ERCC6L2Q5T890 1561 aa25.66■■□□□ 1.7
NPAS3-202ENST00000356141 MAPKBP1O60336 1514 aa25.66■■□□□ 1.7
NPAS3-202ENST00000356141 PLEKHD1A6NEE1 506 aa25.65■■□□□ 1.7
NPAS3-202ENST00000356141 KCNH8Q96L42 1107 aa25.64■■□□□ 1.7
NPAS3-202ENST00000356141 KIF14Q15058 1648 aa25.59■■□□□ 1.69
NPAS3-202ENST00000356141 ARHGEF11O15085 1522 aa25.58■■□□□ 1.69
NPAS3-202ENST00000356141 NAIPQ13075 1403 aa25.58■■□□□ 1.69
NPAS3-202ENST00000356141 YTHDC1Q96MU7 727 aaKnown RBP25.57■■□□□ 1.68
NPAS3-202ENST00000356141 CLSPNQ9HAW4 1339 aa25.55■■□□□ 1.68
NPAS3-202ENST00000356141 ATP10BO94823 1461 aa25.55■■□□□ 1.68
NPAS3-202ENST00000356141 TROQ12816 1431 aaPredicted RBP25.55■■□□□ 1.68
NPAS3-202ENST00000356141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.54■■□□□ 1.68
NPAS3-202ENST00000356141 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
NPAS3-202ENST00000356141 KDM6BO15054 1643 aa25.51■■□□□ 1.67
NPAS3-202ENST00000356141 MIER1Q8N108 512 aa25.5■■□□□ 1.67
NPAS3-202ENST00000356141 HNRNPMP52272 730 aaKnown RBP eCLIP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms