RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 WASHC2CQ9Y4E1 1318 aa10.62□□□□□ -0.71
CCR9-201ENST00000355983 EIF5BO60841 1220 aaKnown RBP10.61□□□□□ -0.71
CCR9-201ENST00000355983 WDR97A6NE52 1622 aa10.6□□□□□ -0.71
CCR9-201ENST00000355983 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
CCR9-201ENST00000355983 SYNJ1O43426 1573 aa10.58□□□□□ -0.72
CCR9-201ENST00000355983 DDX10Q13206 875 aaKnown RBP10.58□□□□□ -0.72
CCR9-201ENST00000355983 CCDC136Q96JN2 1154 aa10.58□□□□□ -0.72
CCR9-201ENST00000355983 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
CCR9-201ENST00000355983 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
CCR9-201ENST00000355983 NCAPD3P42695 1498 aa10.57□□□□□ -0.72
CCR9-201ENST00000355983 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
CCR9-201ENST00000355983 ANP32AP39687 249 aaKnown RBP10.55□□□□□ -0.72
CCR9-201ENST00000355983 NBR1Q14596 966 aa10.55□□□□□ -0.72
CCR9-201ENST00000355983 ERICH3Q5RHP9 1530 aa10.55□□□□□ -0.72
CCR9-201ENST00000355983 CCNB3Q8WWL7 1395 aa10.54□□□□□ -0.72
CCR9-201ENST00000355983 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
CCR9-201ENST00000355983 PKNOX2Q96KN3 472 aa10.52□□□□□ -0.73
CCR9-201ENST00000355983 RSPH6AQ9H0K4 717 aa10.52□□□□□ -0.73
CCR9-201ENST00000355983 MAP3K1Q13233 1512 aa10.51□□□□□ -0.73
CCR9-201ENST00000355983 ARAP1Q96P48 1450 aa10.51□□□□□ -0.73
CCR9-201ENST00000355983 RAB3GAP2Q9H2M9 1393 aa10.51□□□□□ -0.73
CCR9-201ENST00000355983 DNAJC5Q9H3Z4 198 aa10.5□□□□□ -0.73
CCR9-201ENST00000355983 PEG3Q9GZU2 1588 aa10.5□□□□□ -0.73
CCR9-201ENST00000355983 SETD5Q9C0A6 1442 aa10.49□□□□□ -0.73
CCR9-201ENST00000355983 SMARCA4P51532 1647 aa10.49□□□□□ -0.73
CCR9-201ENST00000355983 RAPGEF2Q9Y4G8 1499 aa10.49□□□□□ -0.73
CCR9-201ENST00000355983 PPM1GO15355 546 aaPredicted RBP10.48□□□□□ -0.73
CCR9-201ENST00000355983 HNRNPUQ00839 825 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCR9-201ENST00000355983 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.47□□□□□ -0.73
CCR9-201ENST00000355983 GLIPR1L2Q4G1C9 344 aa10.46□□□□□ -0.73
CCR9-201ENST00000355983 ZBED9Q6R2W3 1325 aa10.45□□□□□ -0.74
CCR9-201ENST00000355983 RNF123Q5XPI4 1314 aa10.45□□□□□ -0.74
CCR9-201ENST00000355983 FHAD1B1AJZ9 1412 aa10.44□□□□□ -0.74
CCR9-201ENST00000355983 NCOA2Q15596 1464 aa10.42□□□□□ -0.74
CCR9-201ENST00000355983 IRX6P78412 446 aaPredicted RBP10.42□□□□□ -0.74
CCR9-201ENST00000355983 FAM43AQ8N2R8 423 aa10.42□□□□□ -0.74
CCR9-201ENST00000355983 B4GALNT3Q6L9W6 998 aa10.41□□□□□ -0.74
CCR9-201ENST00000355983 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
CCR9-201ENST00000355983 PRXQ9BXM0 1461 aa10.41□□□□□ -0.74
CCR9-201ENST00000355983 SMG6Q86US8 1419 aaKnown RBP10.41□□□□□ -0.74
CCR9-201ENST00000355983 KANK4Q5T7N3 995 aaPredicted RBP10.41□□□□□ -0.74
CCR9-201ENST00000355983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCR9-201ENST00000355983 NEFMP07197 916 aa10.39□□□□□ -0.75
CCR9-201ENST00000355983 GSE1Q14687 1217 aa10.39□□□□□ -0.75
CCR9-201ENST00000355983 TIAM1Q13009 1591 aa10.36□□□□□ -0.75
CCR9-201ENST00000355983 TCERG1O14776 1098 aaKnown RBP10.36□□□□□ -0.75
CCR9-201ENST00000355983 MS4A1P11836 297 aa10.36□□□□□ -0.75
CCR9-201ENST00000355983 TOP2BQ02880 1626 aa10.36□□□□□ -0.75
CCR9-201ENST00000355983 CNTLNQ9NXG0 1405 aa10.35□□□□□ -0.75
CCR9-201ENST00000355983 BIVM-ERCC5R4GMW8 1640 aa10.35□□□□□ -0.75
CCR9-201ENST00000355983 ABCA5Q8WWZ7 1642 aa10.34□□□□□ -0.75
CCR9-201ENST00000355983 DDRGK1Q96HY6 314 aa10.34□□□□□ -0.75
CCR9-201ENST00000355983 POLR1AO95602 1720 aaPredicted RBP10.34□□□□□ -0.75
CCR9-201ENST00000355983 BRPF3Q9ULD4 1205 aa10.33□□□□□ -0.76
CCR9-201ENST00000355983 KDM5BQ9UGL1 1544 aa10.33□□□□□ -0.76
CCR9-201ENST00000355983 SIN3AQ96ST3 1273 aa10.32□□□□□ -0.76
CCR9-201ENST00000355983 CFAP43Q8NDM7 1665 aa10.31□□□□□ -0.76
CCR9-201ENST00000355983 TONSLQ96HA7 1378 aa10.31□□□□□ -0.76
CCR9-201ENST00000355983 ARHGAP35Q9NRY4 1499 aa10.29□□□□□ -0.76
CCR9-201ENST00000355983 PLEKHG5O94827 1062 aa10.29□□□□□ -0.76
CCR9-201ENST00000355983 BACH2Q9BYV9 841 aa10.29□□□□□ -0.76
CCR9-201ENST00000355983 NUDCQ9Y266 331 aa10.29□□□□□ -0.76
CCR9-201ENST00000355983 LRRC9Q6ZRR7 1453 aa10.28□□□□□ -0.76
CCR9-201ENST00000355983 RRP9O43818 475 aaKnown RBP10.28□□□□□ -0.76
CCR9-201ENST00000355983 ZMYND15Q9H091 742 aa10.27□□□□□ -0.77
CCR9-201ENST00000355983 UACAQ9BZF9 1416 aa10.27□□□□□ -0.77
CCR9-201ENST00000355983 PRKRIP1Q9H875 184 aaPredicted RBP10.26□□□□□ -0.77
CCR9-201ENST00000355983 NCOA1Q15788 1441 aa10.26□□□□□ -0.77
CCR9-201ENST00000355983 PDE4AP27815 886 aa10.25□□□□□ -0.77
CCR9-201ENST00000355983 UNC13AQ9UPW8 1703 aa10.25□□□□□ -0.77
CCR9-201ENST00000355983 NFKBIBQ15653 356 aa10.25□□□□□ -0.77
CCR9-201ENST00000355983 FRAT1Q92837 279 aaPredicted RBP10.25□□□□□ -0.77
CCR9-201ENST00000355983 PODXL2Q9NZ53 605 aa10.25□□□□□ -0.77
CCR9-201ENST00000355983 LAS1LQ9Y4W2 734 aaKnown RBP10.25□□□□□ -0.77
CCR9-201ENST00000355983 AKNAQ7Z591 1439 aa10.23□□□□□ -0.77
CCR9-201ENST00000355983 HIRIP3Q9BW71 556 aaPredicted RBP10.23□□□□□ -0.77
CCR9-201ENST00000355983 PHLDB1Q86UU1 1377 aa10.22□□□□□ -0.77
CCR9-201ENST00000355983 MRS2Q9HD23 443 aa10.21□□□□□ -0.78
CCR9-201ENST00000355983 HFM1A2PYH4 1435 aa10.21□□□□□ -0.78
CCR9-201ENST00000355983 CCDC7Q96M83 1385 aa10.21□□□□□ -0.78
CCR9-201ENST00000355983 VSIG10Q8N0Z9 540 aa10.2□□□□□ -0.78
CCR9-201ENST00000355983 CENPJQ9HC77 1338 aaPredicted RBP10.2□□□□□ -0.78
CCR9-201ENST00000355983 CCDC184Q52MB2 194 aa10.2□□□□□ -0.78
CCR9-201ENST00000355983 CCDC18Q5T9S5 1454 aa10.19□□□□□ -0.78
CCR9-201ENST00000355983 PTPN23Q9H3S7 1636 aa10.19□□□□□ -0.78
CCR9-201ENST00000355983 HSPA5P11021 654 aaKnown RBP10.18□□□□□ -0.78
CCR9-201ENST00000355983 EIF4G2P78344 907 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCR9-201ENST00000355983 HSP90AA2PQ14568 343 aaPredicted RBP10.18□□□□□ -0.78
CCR9-201ENST00000355983 L1TD1Q5T7N2 865 aaKnown RBP10.18□□□□□ -0.78
CCR9-201ENST00000355983 PLPPR3Q6T4P5 718 aa10.18□□□□□ -0.78
CCR9-201ENST00000355983 HECW1Q76N89 1606 aa10.17□□□□□ -0.78
CCR9-201ENST00000355983 FAM9BQ8IZU0 186 aa10.17□□□□□ -0.78
CCR9-201ENST00000355983 KIF27Q86VH2 1401 aa10.15□□□□□ -0.78
CCR9-201ENST00000355983 BICRAQ9NZM4 1560 aa10.15□□□□□ -0.78
CCR9-201ENST00000355983 CLCN1P35523 988 aa10.15□□□□□ -0.78
CCR9-201ENST00000355983 NPM2Q86SE8 214 aaKnown RBP10.15□□□□□ -0.78
CCR9-201ENST00000355983 DCAF11Q8TEB1 546 aa10.15□□□□□ -0.78
CCR9-201ENST00000355983 HSP90AA1P07900 732 aaKnown RBP10.14□□□□□ -0.79
CCR9-201ENST00000355983 AQRO60306 1485 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCR9-201ENST00000355983 RRP1P56182 461 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms