RNA–Protein interactions for RNA: ENST00000355852.6

PCBP4-202, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-202ENST00000355852 GRIN2AQ12879 1464 aa25.97■■□□□ 1.75
PCBP4-202ENST00000355852 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.75
PCBP4-202ENST00000355852 CTTNBP2Q8WZ74 1663 aa25.94■■□□□ 1.74
PCBP4-202ENST00000355852 CEP162Q5TB80 1403 aa25.92■■□□□ 1.74
PCBP4-202ENST00000355852 RANGAP1P46060 587 aaPredicted RBP25.91■■□□□ 1.74
PCBP4-202ENST00000355852 CHD1O14646 1710 aa25.91■■□□□ 1.74
PCBP4-202ENST00000355852 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
PCBP4-202ENST00000355852 CLIP1P30622 1438 aa25.81■■□□□ 1.72
PCBP4-202ENST00000355852 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
PCBP4-202ENST00000355852 IQGAP2Q13576 1575 aa25.78■■□□□ 1.72
PCBP4-202ENST00000355852 NUP160Q12769 1436 aa25.77■■□□□ 1.72
PCBP4-202ENST00000355852 KIAA0586Q9BVV6 1533 aa25.74■■□□□ 1.71
PCBP4-202ENST00000355852 ZEB1P37275 1124 aaPredicted RBP25.73■■□□□ 1.71
PCBP4-202ENST00000355852 ARHGAP35Q9NRY4 1499 aa25.68■■□□□ 1.7
PCBP4-202ENST00000355852 EFCAB5A4FU69 1503 aa25.64■■□□□ 1.7
PCBP4-202ENST00000355852 ARAP1Q96P48 1450 aa25.61■■□□□ 1.69
PCBP4-202ENST00000355852 SAMD9Q5K651 1589 aa25.61■■□□□ 1.69
PCBP4-202ENST00000355852 UGGT2Q9NYU1 1516 aa25.61■■□□□ 1.69
PCBP4-202ENST00000355852 P3H3Q8IVL6 736 aa25.61■■□□□ 1.69
PCBP4-202ENST00000355852 FHOD3Q2V2M9 1422 aa25.57■■□□□ 1.68
PCBP4-202ENST00000355852 CLASP1Q7Z460 1538 aa25.56■■□□□ 1.68
PCBP4-202ENST00000355852 JPH4Q96JJ6 628 aa25.55■■□□□ 1.68
PCBP4-202ENST00000355852 KIAA0556O60303 1618 aa25.52■■□□□ 1.68
PCBP4-202ENST00000355852 VPS8Q8N3P4 1428 aa25.51■■□□□ 1.67
PCBP4-202ENST00000355852 DISP1Q96F81 1524 aa25.51■■□□□ 1.67
PCBP4-202ENST00000355852 OSCARQ8IYS5 282 aa25.49■■□□□ 1.67
PCBP4-202ENST00000355852 SHROOM2Q13796 1616 aa25.49■■□□□ 1.67
PCBP4-202ENST00000355852 CARMIL2Q6F5E8 1435 aa25.46■■□□□ 1.67
PCBP4-202ENST00000355852 PRG4Q92954 1404 aaPredicted RBP25.45■■□□□ 1.67
PCBP4-202ENST00000355852 TTBK1Q5TCY1 1321 aaPredicted RBP25.41■■□□□ 1.66
PCBP4-202ENST00000355852 FMN1Q68DA7 1419 aa25.4■■□□□ 1.66
PCBP4-202ENST00000355852 PCF11O94913 1555 aaKnown RBP25.37■■□□□ 1.65
PCBP4-202ENST00000355852 ERCC6L2Q5T890 1561 aa25.37■■□□□ 1.65
PCBP4-202ENST00000355852 ATP1B4Q9UN42 357 aaPredicted RBP25.3■■□□□ 1.64
PCBP4-202ENST00000355852 FYCO1Q9BQS8 1478 aa25.3■■□□□ 1.64
PCBP4-202ENST00000355852 CASKIN1Q8WXD9 1431 aa25.28■■□□□ 1.64
PCBP4-202ENST00000355852 APLP2Q06481 763 aa25.27■■□□□ 1.64
PCBP4-202ENST00000355852 PTPRGP23470 1445 aa25.24■■□□□ 1.63
PCBP4-202ENST00000355852 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
PCBP4-202ENST00000355852 PLB1Q6P1J6 1458 aa25.22■■□□□ 1.63
PCBP4-202ENST00000355852 HECW1Q76N89 1606 aa25.21■■□□□ 1.63
PCBP4-202ENST00000355852 LRRIQ1Q96JM4 1722 aa25.19■■□□□ 1.62
PCBP4-202ENST00000355852 SCAF1Q9H7N4 1312 aaKnown RBP25.17■■□□□ 1.62
PCBP4-202ENST00000355852 TIAM1Q13009 1591 aa25.16■■□□□ 1.62
PCBP4-202ENST00000355852 CFAP43Q8NDM7 1665 aa25.16■■□□□ 1.62
PCBP4-202ENST00000355852 ABCA8O94911 1581 aa25.15■■□□□ 1.62
PCBP4-202ENST00000355852 ARID3CA6NKF2 412 aa25.14■■□□□ 1.62
PCBP4-202ENST00000355852 NUP153P49790 1475 aaKnown RBP25.13■■□□□ 1.61
PCBP4-202ENST00000355852 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
PCBP4-202ENST00000355852 CCDC18Q5T9S5 1454 aa25.11■■□□□ 1.61
PCBP4-202ENST00000355852 EPRSP07814 1512 aaKnown RBP25.1■■□□□ 1.61
PCBP4-202ENST00000355852 MAP3K1Q13233 1512 aa25.1■■□□□ 1.61
PCBP4-202ENST00000355852 CDK13Q14004 1512 aaKnown RBP25.09■■□□□ 1.61
PCBP4-202ENST00000355852 UACAQ9BZF9 1416 aa25.09■■□□□ 1.61
PCBP4-202ENST00000355852 KANK4Q5T7N3 995 aaPredicted RBP25.07■■□□□ 1.6
PCBP4-202ENST00000355852 ABCC2Q92887 1545 aa25.04■■□□□ 1.6
PCBP4-202ENST00000355852 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
PCBP4-202ENST00000355852 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
PCBP4-202ENST00000355852 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
PCBP4-202ENST00000355852 MYT1Q01538 1121 aa25.03■■□□□ 1.6
PCBP4-202ENST00000355852 LRRC9Q6ZRR7 1453 aa25.02■■□□□ 1.6
PCBP4-202ENST00000355852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.02■■□□□ 1.6
PCBP4-202ENST00000355852 HNRNPUL2Q1KMD3 747 aaKnown RBP25.02■■□□□ 1.6
PCBP4-202ENST00000355852 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
PCBP4-202ENST00000355852 ADCY10Q96PN6 1610 aa24.97■■□□□ 1.59
PCBP4-202ENST00000355852 ATP10BO94823 1461 aa24.97■■□□□ 1.59
PCBP4-202ENST00000355852 UHRF1BP1LA0JNW5 1464 aa24.96■■□□□ 1.59
PCBP4-202ENST00000355852 MAGI3Q5TCQ9 1506 aa24.95■■□□□ 1.58
PCBP4-202ENST00000355852 EHBP1L1Q8N3D4 1523 aa24.94■■□□□ 1.58
PCBP4-202ENST00000355852 ZCCHC11Q5TAX3 1644 aaKnown RBP24.9■■□□□ 1.58
PCBP4-202ENST00000355852 CDK11AQ9UQ88 783 aaPredicted RBP24.9■■□□□ 1.58
PCBP4-202ENST00000355852 KDM5BQ9UGL1 1544 aa24.88■■□□□ 1.57
PCBP4-202ENST00000355852 CYB5RLQ6IPT4 315 aa24.88■■□□□ 1.57
PCBP4-202ENST00000355852 SUPT6HQ7KZ85 1726 aaKnown RBP24.87■■□□□ 1.57
PCBP4-202ENST00000355852 TROQ12816 1431 aaPredicted RBP24.83■■□□□ 1.57
PCBP4-202ENST00000355852 PLEKHD1A6NEE1 506 aa24.83■■□□□ 1.56
PCBP4-202ENST00000355852 NCOA2Q15596 1464 aa24.81■■□□□ 1.56
PCBP4-202ENST00000355852 ACIN1Q9UKV3 1341 aaKnown RBP24.8■■□□□ 1.56
PCBP4-202ENST00000355852 KIF14Q15058 1648 aa24.78■■□□□ 1.56
PCBP4-202ENST00000355852 PHLDB1Q86UU1 1377 aa24.77■■□□□ 1.56
PCBP4-202ENST00000355852 NPM1P06748 294 aaKnown RBP eCLIP24.76■■□□□ 1.55
PCBP4-202ENST00000355852 WDR7Q9Y4E6 1490 aa24.69■■□□□ 1.54
PCBP4-202ENST00000355852 ASXL2Q76L83 1435 aa24.68■■□□□ 1.54
PCBP4-202ENST00000355852 MYOM3Q5VTT5 1437 aa24.67■■□□□ 1.54
PCBP4-202ENST00000355852 KCNH8Q96L42 1107 aa24.67■■□□□ 1.54
PCBP4-202ENST00000355852 RRBP1Q9P2E9 1410 aaKnown RBP24.66■■□□□ 1.54
PCBP4-202ENST00000355852 CCNB3Q8WWL7 1395 aa24.66■■□□□ 1.54
PCBP4-202ENST00000355852 FGD6Q6ZV73 1430 aa24.64■■□□□ 1.53
PCBP4-202ENST00000355852 ABCC10Q5T3U5 1492 aa24.63■■□□□ 1.53
PCBP4-202ENST00000355852 ITSN2Q9NZM3 1697 aa24.62■■□□□ 1.53
PCBP4-202ENST00000355852 CENPBP07199 599 aaPredicted RBP24.62■■□□□ 1.53
PCBP4-202ENST00000355852 TTC37Q6PGP7 1564 aa24.62■■□□□ 1.53
PCBP4-202ENST00000355852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.61■■□□□ 1.53
PCBP4-202ENST00000355852 CDC42BPAQ5VT25 1732 aa24.6■■□□□ 1.53
PCBP4-202ENST00000355852 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
PCBP4-202ENST00000355852 MAPKBP1O60336 1514 aa24.59■■□□□ 1.53
PCBP4-202ENST00000355852 GPATCH8Q9UKJ3 1502 aaKnown RBP24.58■■□□□ 1.53
PCBP4-202ENST00000355852 FAM50AQ14320 339 aaKnown RBP24.57■■□□□ 1.52
PCBP4-202ENST00000355852 NEUROD1Q13562 356 aa24.57■■□□□ 1.52
PCBP4-202ENST00000355852 PTPN23Q9H3S7 1636 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms