RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
SREBF1-202ENST00000355815 MTUS2Q5JR59 1369 aa19.52■□□□□ 0.72
SREBF1-202ENST00000355815 IRX6P78412 446 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-202ENST00000355815 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
SREBF1-202ENST00000355815 CCNB3Q8WWL7 1395 aa19.47■□□□□ 0.71
SREBF1-202ENST00000355815 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■■□□□ 12.3
SREBF1-202ENST00000355815 PRKCSHP14314 528 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-202ENST00000355815 FAM9BQ8IZU0 186 aa19.42■□□□□ 0.7
SREBF1-202ENST00000355815 KCNH8Q96L42 1107 aa19.42■□□□□ 0.7
SREBF1-202ENST00000355815 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
SREBF1-202ENST00000355815 ANP32AP39687 249 aaKnown RBP19.37■□□□□ 0.69
SREBF1-202ENST00000355815 RAB3GAP2Q9H2M9 1393 aa19.33■□□□□ 0.68
SREBF1-202ENST00000355815 RTN4Q9NQC3 1192 aaKnown RBP19.32■□□□□ 0.68
SREBF1-202ENST00000355815 FOXD1Q16676 465 aa19.32■□□□□ 0.68
SREBF1-202ENST00000355815 SALL2Q9Y467 1007 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-202ENST00000355815 KDM2AQ9Y2K7 1162 aa19.3■□□□□ 0.68
SREBF1-202ENST00000355815 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
SREBF1-202ENST00000355815 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
SREBF1-202ENST00000355815 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
SREBF1-202ENST00000355815 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
SREBF1-202ENST00000355815 CHMP7Q8WUX9 453 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-202ENST00000355815 SUPT16HQ9Y5B9 1047 aaKnown RBP19.24■□□□□ 0.67
SREBF1-202ENST00000355815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.678e-9■■□□□ 11.5
SREBF1-202ENST00000355815 ARXQ96QS3 562 aa19.22■□□□□ 0.67
SREBF1-202ENST00000355815 CADPSQ9ULU8 1353 aa19.22■□□□□ 0.67
SREBF1-202ENST00000355815 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
SREBF1-202ENST00000355815 IGF1RP08069 1367 aa19.19■□□□□ 0.66
SREBF1-202ENST00000355815 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
SREBF1-202ENST00000355815 KIF21BO75037 1637 aa19.17■□□□□ 0.66
SREBF1-202ENST00000355815 EIF4G2P78344 907 aaKnown RBP eCLIP19.16■□□□□ 0.666e-7■■■■□ 24.4
SREBF1-202ENST00000355815 ZBTB47Q9UFB7 747 aaPredicted RBP19.14■□□□□ 0.66
SREBF1-202ENST00000355815 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
SREBF1-202ENST00000355815 EIF4G1Q04637 1599 aaKnown RBP19.13■□□□□ 0.65
SREBF1-202ENST00000355815 FHAD1B1AJZ9 1412 aa19.12■□□□□ 0.65
SREBF1-202ENST00000355815 RGL3Q3MIN7 710 aa19.11■□□□□ 0.65
SREBF1-202ENST00000355815 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
SREBF1-202ENST00000355815 PPP1R15AO75807 674 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-202ENST00000355815 CFDP1Q9UEE9 299 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-202ENST00000355815 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.65
SREBF1-202ENST00000355815 BICRAQ9NZM4 1560 aa19.08■□□□□ 0.65
SREBF1-202ENST00000355815 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
SREBF1-202ENST00000355815 CCDC136Q96JN2 1154 aa19.06■□□□□ 0.64
SREBF1-202ENST00000355815 TSPY4P0CV99 314 aa19.05■□□□□ 0.64
SREBF1-202ENST00000355815 TSPY10P0CW01 314 aa19.05■□□□□ 0.64
SREBF1-202ENST00000355815 PHLDB1Q86UU1 1377 aa19.04■□□□□ 0.64
SREBF1-202ENST00000355815 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.64
SREBF1-202ENST00000355815 HSPA5P11021 654 aaKnown RBP19.02■□□□□ 0.64
SREBF1-202ENST00000355815 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.64
SREBF1-202ENST00000355815 TMC1Q8TDI8 760 aa19.01■□□□□ 0.63
SREBF1-202ENST00000355815 TSHZ2Q9NRE2 1034 aa19.01■□□□□ 0.63
SREBF1-202ENST00000355815 RBM19Q9Y4C8 960 aaKnown RBP19■□□□□ 0.63
SREBF1-202ENST00000355815 NCAPD3P42695 1498 aa18.99■□□□□ 0.63
SREBF1-202ENST00000355815 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
SREBF1-202ENST00000355815 PLEKHD1A6NEE1 506 aa18.98■□□□□ 0.63
SREBF1-202ENST00000355815 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
SREBF1-202ENST00000355815 CUX1P39880 1505 aa18.95■□□□□ 0.62
SREBF1-202ENST00000355815 DEKP35659 375 aaKnown RBP18.95■□□□□ 0.62
SREBF1-202ENST00000355815 L3MBTL2Q969R5 705 aa18.94■□□□□ 0.62
SREBF1-202ENST00000355815 MPHOSPH9Q99550 1183 aa18.94■□□□□ 0.62
SREBF1-202ENST00000355815 NESP48681 1621 aa18.93■□□□□ 0.62
SREBF1-202ENST00000355815 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
SREBF1-202ENST00000355815 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-202ENST00000355815 LAS1LQ9Y4W2 734 aaKnown RBP18.91■□□□□ 0.62
SREBF1-202ENST00000355815 CFTRP13569 1480 aa18.88■□□□□ 0.61
SREBF1-202ENST00000355815 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-202ENST00000355815 GLIPR1L2Q4G1C9 344 aa18.88■□□□□ 0.61
SREBF1-202ENST00000355815 CARD11Q9BXL7 1154 aa18.88■□□□□ 0.61
SREBF1-202ENST00000355815 B4GALNT3Q6L9W6 998 aa18.87■□□□□ 0.61
SREBF1-202ENST00000355815 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
SREBF1-202ENST00000355815 FMN1Q68DA7 1419 aa18.86■□□□□ 0.61
SREBF1-202ENST00000355815 PKD2Q13563 968 aa18.86■□□□□ 0.61
SREBF1-202ENST00000355815 TIMELESSQ9UNS1 1208 aa18.84■□□□□ 0.61
SREBF1-202ENST00000355815 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
SREBF1-202ENST00000355815 DCAF11Q8TEB1 546 aa18.84■□□□□ 0.61
SREBF1-202ENST00000355815 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.6
SREBF1-202ENST00000355815 PDS5BQ9NTI5 1447 aa18.81■□□□□ 0.6
SREBF1-202ENST00000355815 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
SREBF1-202ENST00000355815 NEFMP07197 916 aa18.8■□□□□ 0.6
SREBF1-202ENST00000355815 ERCC6Q03468 1493 aa18.77■□□□□ 0.6
SREBF1-202ENST00000355815 RRBP1Q9P2E9 1410 aaKnown RBP18.77■□□□□ 0.6
SREBF1-202ENST00000355815 CCER2I3L3R5 266 aa18.77■□□□□ 0.6
SREBF1-202ENST00000355815 NOP58Q9Y2X3 529 aaKnown RBP18.76■□□□□ 0.59
SREBF1-202ENST00000355815 HNRNPMP52272 730 aaKnown RBP eCLIP18.75■□□□□ 0.598e-8■■□□□ 12.4
SREBF1-202ENST00000355815 AQRO60306 1485 aaKnown RBP eCLIP18.75■□□□□ 0.592e-8■■■■■ 30.6
SREBF1-202ENST00000355815 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
SREBF1-202ENST00000355815 ERICH3Q5RHP9 1530 aa18.73■□□□□ 0.59
SREBF1-202ENST00000355815 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
SREBF1-202ENST00000355815 FGD6Q6ZV73 1430 aa18.7■□□□□ 0.58
SREBF1-202ENST00000355815 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
SREBF1-202ENST00000355815 JPH4Q96JJ6 628 aa18.69■□□□□ 0.58
SREBF1-202ENST00000355815 NUP155O75694 1391 aa18.67■□□□□ 0.58
SREBF1-202ENST00000355815 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-202ENST00000355815 HSP90AA1P07900 732 aaKnown RBP18.64■□□□□ 0.57
SREBF1-202ENST00000355815 CCDC184Q52MB2 194 aa18.63■□□□□ 0.57
SREBF1-202ENST00000355815 ARID4BQ4LE39 1312 aaPredicted RBP18.62■□□□□ 0.57
SREBF1-202ENST00000355815 WASHC2AQ641Q2 1341 aa18.61■□□□□ 0.57
SREBF1-202ENST00000355815 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
SREBF1-202ENST00000355815 PPP4R2Q9NY27 417 aa18.6■□□□□ 0.57
SREBF1-202ENST00000355815 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
SREBF1-202ENST00000355815 TNNT2P45379 298 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms