RNA–Protein interactions for RNA: ENST00000355650.4

ZNF253-201, Transcript of zinc finger protein 253, humanhuman

TSL 1 (best) BASIC

Gene ZNF253, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253-201ENST00000355650 NEUROD1Q13562 356 aa9.86□□□□□ -0.83
ZNF253-201ENST00000355650 ACIN1Q9UKV3 1341 aaKnown RBP9.86□□□□□ -0.83
ZNF253-201ENST00000355650 MAP3K1Q13233 1512 aa9.86□□□□□ -0.83
ZNF253-201ENST00000355650 TIAM1Q13009 1591 aa9.85□□□□□ -0.83
ZNF253-201ENST00000355650 P3H3Q8IVL6 736 aa9.84□□□□□ -0.83
ZNF253-201ENST00000355650 DNAJC5BQ9UF47 199 aa9.83□□□□□ -0.84
ZNF253-201ENST00000355650 LRRC9Q6ZRR7 1453 aa9.83□□□□□ -0.84
ZNF253-201ENST00000355650 LAMC3Q9Y6N6 1575 aa9.83□□□□□ -0.84
ZNF253-201ENST00000355650 URB2Q14146 1524 aaKnown RBP9.83□□□□□ -0.84
ZNF253-201ENST00000355650 FHAD1B1AJZ9 1412 aa9.82□□□□□ -0.84
ZNF253-201ENST00000355650 ITGAEP38570 1179 aa9.82□□□□□ -0.84
ZNF253-201ENST00000355650 PHLDB1Q86UU1 1377 aa9.81□□□□□ -0.84
ZNF253-201ENST00000355650 CUL7Q14999 1698 aa9.8□□□□□ -0.84
ZNF253-201ENST00000355650 FHOD3Q2V2M9 1422 aa9.8□□□□□ -0.84
ZNF253-201ENST00000355650 MIER1Q8N108 512 aa9.8□□□□□ -0.84
ZNF253-201ENST00000355650 PCF11O94913 1555 aaKnown RBP9.8□□□□□ -0.84
ZNF253-201ENST00000355650 CENPBP07199 599 aaPredicted RBP9.79□□□□□ -0.84
ZNF253-201ENST00000355650 WDR97A6NE52 1622 aa9.79□□□□□ -0.84
ZNF253-201ENST00000355650 TDRD9Q8NDG6 1382 aaKnown RBP9.79□□□□□ -0.84
ZNF253-201ENST00000355650 CFAP43Q8NDM7 1665 aa9.78□□□□□ -0.84
ZNF253-201ENST00000355650 RAB3GAP2Q9H2M9 1393 aa9.78□□□□□ -0.84
ZNF253-201ENST00000355650 EFCAB5A4FU69 1503 aa9.77□□□□□ -0.84
ZNF253-201ENST00000355650 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.84
ZNF253-201ENST00000355650 CTTNBP2Q8WZ74 1663 aa9.77□□□□□ -0.85
ZNF253-201ENST00000355650 PDS5BQ9NTI5 1447 aa9.77□□□□□ -0.85
ZNF253-201ENST00000355650 CASKIN1Q8WXD9 1431 aa9.76□□□□□ -0.85
ZNF253-201ENST00000355650 ABCA5Q8WWZ7 1642 aa9.76□□□□□ -0.85
ZNF253-201ENST00000355650 FYCO1Q9BQS8 1478 aa9.76□□□□□ -0.85
ZNF253-201ENST00000355650 AQRO60306 1485 aaKnown RBP eCLIP9.75□□□□□ -0.85
ZNF253-201ENST00000355650 GAPVD1Q14C86 1478 aa9.75□□□□□ -0.85
ZNF253-201ENST00000355650 FAM50AQ14320 339 aaKnown RBP9.74□□□□□ -0.85
ZNF253-201ENST00000355650 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
ZNF253-201ENST00000355650 SETD5Q9C0A6 1442 aa9.74□□□□□ -0.85
ZNF253-201ENST00000355650 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
ZNF253-201ENST00000355650 MAPKBP1O60336 1514 aa9.73□□□□□ -0.85
ZNF253-201ENST00000355650 YTHDC1Q96MU7 727 aaKnown RBP9.72□□□□□ -0.85
ZNF253-201ENST00000355650 FMN1Q68DA7 1419 aa9.72□□□□□ -0.85
ZNF253-201ENST00000355650 SNAPC4Q5SXM2 1469 aa9.72□□□□□ -0.85
ZNF253-201ENST00000355650 SAMD9Q5K651 1589 aa9.7□□□□□ -0.86
ZNF253-201ENST00000355650 TARBP1Q13395 1621 aaKnown RBP9.7□□□□□ -0.86
ZNF253-201ENST00000355650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.69□□□□□ -0.86
ZNF253-201ENST00000355650 LRRIQ1Q96JM4 1722 aa9.68□□□□□ -0.86
ZNF253-201ENST00000355650 FGD6Q6ZV73 1430 aa9.66□□□□□ -0.86
ZNF253-201ENST00000355650 SIN3AQ96ST3 1273 aa9.66□□□□□ -0.86
ZNF253-201ENST00000355650 MTUS2Q5JR59 1369 aa9.66□□□□□ -0.86
ZNF253-201ENST00000355650 GRIN2BQ13224 1484 aa9.66□□□□□ -0.86
ZNF253-201ENST00000355650 PTPRKQ15262 1439 aa9.63□□□□□ -0.87
ZNF253-201ENST00000355650 NCOA2Q15596 1464 aa9.63□□□□□ -0.87
ZNF253-201ENST00000355650 PBRM1Q86U86 1689 aa9.63□□□□□ -0.87
ZNF253-201ENST00000355650 THOC2Q8NI27 1593 aaKnown RBP9.62□□□□□ -0.87
ZNF253-201ENST00000355650 MYOM3Q5VTT5 1437 aa9.61□□□□□ -0.87
ZNF253-201ENST00000355650 MRC2Q9UBG0 1479 aa9.61□□□□□ -0.87
ZNF253-201ENST00000355650 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
ZNF253-201ENST00000355650 MAGI3Q5TCQ9 1506 aa9.6□□□□□ -0.87
ZNF253-201ENST00000355650 ADAMTS12P58397 1594 aa9.6□□□□□ -0.87
ZNF253-201ENST00000355650 SUPT6HQ7KZ85 1726 aaKnown RBP9.59□□□□□ -0.87
ZNF253-201ENST00000355650 HFM1A2PYH4 1435 aa9.59□□□□□ -0.87
ZNF253-201ENST00000355650 EHBP1L1Q8N3D4 1523 aa9.59□□□□□ -0.87
ZNF253-201ENST00000355650 IQGAP2Q13576 1575 aa9.59□□□□□ -0.87
ZNF253-201ENST00000355650 ARHGEF11O15085 1522 aa9.59□□□□□ -0.87
ZNF253-201ENST00000355650 PELP1Q8IZL8 1130 aaKnown RBP9.58□□□□□ -0.88
ZNF253-201ENST00000355650 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
ZNF253-201ENST00000355650 UGGT2Q9NYU1 1516 aa9.58□□□□□ -0.88
ZNF253-201ENST00000355650 PPP1R15AO75807 674 aaPredicted RBP9.58□□□□□ -0.88
ZNF253-201ENST00000355650 ZNF608Q9ULD9 1512 aaPredicted RBP9.58□□□□□ -0.88
ZNF253-201ENST00000355650 PTPN23Q9H3S7 1636 aa9.57□□□□□ -0.88
ZNF253-201ENST00000355650 NAIPQ13075 1403 aa9.57□□□□□ -0.88
ZNF253-201ENST00000355650 PPP6R1Q9UPN7 881 aa9.57□□□□□ -0.88
ZNF253-201ENST00000355650 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
ZNF253-201ENST00000355650 EPRSP07814 1512 aaKnown RBP9.56□□□□□ -0.88
ZNF253-201ENST00000355650 IFT140Q96RY7 1462 aa9.55□□□□□ -0.88
ZNF253-201ENST00000355650 HECW1Q76N89 1606 aa9.55□□□□□ -0.88
ZNF253-201ENST00000355650 WDR62O43379 1518 aa9.54□□□□□ -0.88
ZNF253-201ENST00000355650 CDK13Q14004 1512 aaKnown RBP9.54□□□□□ -0.88
ZNF253-201ENST00000355650 ADRA2BP18089 450 aa9.54□□□□□ -0.88
ZNF253-201ENST00000355650 TCOF1Q13428 1488 aaKnown RBP9.53□□□□□ -0.88
ZNF253-201ENST00000355650 ARID3CA6NKF2 412 aa9.53□□□□□ -0.88
ZNF253-201ENST00000355650 DDX10Q13206 875 aaKnown RBP9.53□□□□□ -0.88
ZNF253-201ENST00000355650 KCNH8Q96L42 1107 aa9.52□□□□□ -0.89
ZNF253-201ENST00000355650 HIRIP3Q9BW71 556 aaPredicted RBP9.52□□□□□ -0.89
ZNF253-201ENST00000355650 RRP7BPQ9NSQ0 103 aa9.52□□□□□ -0.89
ZNF253-201ENST00000355650 CHIC2Q9UKJ5 165 aa9.52□□□□□ -0.89
ZNF253-201ENST00000355650 KIAA0586Q9BVV6 1533 aa9.52□□□□□ -0.89
ZNF253-201ENST00000355650 DISP1Q96F81 1524 aa9.51□□□□□ -0.89
ZNF253-201ENST00000355650 PLPPR3Q6T4P5 718 aa9.51□□□□□ -0.89
ZNF253-201ENST00000355650 TONSLQ96HA7 1378 aa9.51□□□□□ -0.89
ZNF253-201ENST00000355650 MIA2Q96PC5 1412 aa9.5□□□□□ -0.89
ZNF253-201ENST00000355650 KIAA0556O60303 1618 aa9.49□□□□□ -0.89
ZNF253-201ENST00000355650 GRIN2AQ12879 1464 aa9.49□□□□□ -0.89
ZNF253-201ENST00000355650 EIF4G3O43432 1585 aaKnown RBP9.49□□□□□ -0.89
ZNF253-201ENST00000355650 DENND4BO75064 1496 aaPredicted RBP9.49□□□□□ -0.89
ZNF253-201ENST00000355650 GCC2Q8IWJ2 1684 aa9.48□□□□□ -0.89
ZNF253-201ENST00000355650 KDM6BO15054 1643 aa9.48□□□□□ -0.89
ZNF253-201ENST00000355650 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
ZNF253-201ENST00000355650 AKNAQ7Z591 1439 aa9.47□□□□□ -0.89
ZNF253-201ENST00000355650 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
ZNF253-201ENST00000355650 CACNB1Q02641 598 aaPredicted RBP9.47□□□□□ -0.89
ZNF253-201ENST00000355650 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
ZNF253-201ENST00000355650 ERCC6Q03468 1493 aa9.45□□□□□ -0.9
ZNF253-201ENST00000355650 ZNF644Q9H582 1327 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms