RNA–Protein interactions for RNA: ENST00000355216.5

FOXN4-202, Transcript of forkhead box N4, humanhuman

TSL 2 BASIC

Gene FOXN4, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-202ENST00000355216 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.85
FOXN4-202ENST00000355216 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
FOXN4-202ENST00000355216 FHOD3Q2V2M9 1422 aa20.31■□□□□ 0.84
FOXN4-202ENST00000355216 CTTNBP2Q8WZ74 1663 aa20.29■□□□□ 0.84
FOXN4-202ENST00000355216 LRRC9Q6ZRR7 1453 aa20.29■□□□□ 0.84
FOXN4-202ENST00000355216 EFCAB5A4FU69 1503 aa20.28■□□□□ 0.84
FOXN4-202ENST00000355216 PCF11O94913 1555 aaKnown RBP20.28■□□□□ 0.84
FOXN4-202ENST00000355216 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.84
FOXN4-202ENST00000355216 ATP1B4Q9UN42 357 aaPredicted RBP20.26■□□□□ 0.83
FOXN4-202ENST00000355216 DIEXFQ68CQ4 756 aaKnown RBP20.24■□□□□ 0.83
FOXN4-202ENST00000355216 DHX57Q6P158 1386 aaKnown RBP20.22■□□□□ 0.83
FOXN4-202ENST00000355216 CFAP43Q8NDM7 1665 aa20.21■□□□□ 0.83
FOXN4-202ENST00000355216 CASKIN1Q8WXD9 1431 aa20.21■□□□□ 0.83
FOXN4-202ENST00000355216 ZNF316A6NFI3 1004 aaPredicted RBP20.21■□□□□ 0.83
FOXN4-202ENST00000355216 ITGAEP38570 1179 aa20.21■□□□□ 0.83
FOXN4-202ENST00000355216 FYCO1Q9BQS8 1478 aa20.2■□□□□ 0.83
FOXN4-202ENST00000355216 PHLDB1Q86UU1 1377 aa20.2■□□□□ 0.82
FOXN4-202ENST00000355216 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
FOXN4-202ENST00000355216 MRC2Q9UBG0 1479 aa20.19■□□□□ 0.82
FOXN4-202ENST00000355216 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
FOXN4-202ENST00000355216 FMN1Q68DA7 1419 aa20.16■□□□□ 0.82
FOXN4-202ENST00000355216 SAMD9Q5K651 1589 aa20.14■□□□□ 0.81
FOXN4-202ENST00000355216 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
FOXN4-202ENST00000355216 PBRM1Q86U86 1689 aa20.12■□□□□ 0.81
FOXN4-202ENST00000355216 FAM50AQ14320 339 aaKnown RBP20.09■□□□□ 0.81
FOXN4-202ENST00000355216 RAB3GAP2Q9H2M9 1393 aa20.07■□□□□ 0.8
FOXN4-202ENST00000355216 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
FOXN4-202ENST00000355216 WDR62O43379 1518 aa20.04■□□□□ 0.8
FOXN4-202ENST00000355216 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
FOXN4-202ENST00000355216 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
FOXN4-202ENST00000355216 ZNF608Q9ULD9 1512 aaPredicted RBP20.04■□□□□ 0.8
FOXN4-202ENST00000355216 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.8
FOXN4-202ENST00000355216 LRRIQ1Q96JM4 1722 aa20.01■□□□□ 0.79
FOXN4-202ENST00000355216 MTUS2Q5JR59 1369 aa20■□□□□ 0.79
FOXN4-202ENST00000355216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.98■□□□□ 0.79
FOXN4-202ENST00000355216 IQGAP2Q13576 1575 aa19.98■□□□□ 0.79
FOXN4-202ENST00000355216 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
FOXN4-202ENST00000355216 FGD6Q6ZV73 1430 aa19.95■□□□□ 0.78
FOXN4-202ENST00000355216 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
FOXN4-202ENST00000355216 MAPKBP1O60336 1514 aa19.93■□□□□ 0.78
FOXN4-202ENST00000355216 NCOA2Q15596 1464 aa19.9■□□□□ 0.78
FOXN4-202ENST00000355216 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
FOXN4-202ENST00000355216 EHBP1L1Q8N3D4 1523 aa19.88■□□□□ 0.77
FOXN4-202ENST00000355216 UGGT2Q9NYU1 1516 aa19.88■□□□□ 0.77
FOXN4-202ENST00000355216 MAGI3Q5TCQ9 1506 aa19.87■□□□□ 0.77
FOXN4-202ENST00000355216 CCDC18Q5T9S5 1454 aa19.87■□□□□ 0.77
FOXN4-202ENST00000355216 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
FOXN4-202ENST00000355216 SUPT6HQ7KZ85 1726 aaKnown RBP19.86■□□□□ 0.77
FOXN4-202ENST00000355216 MIER1Q8N108 512 aa19.86■□□□□ 0.77
FOXN4-202ENST00000355216 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
FOXN4-202ENST00000355216 KIAA0586Q9BVV6 1533 aa19.85■□□□□ 0.77
FOXN4-202ENST00000355216 HECW1Q76N89 1606 aa19.85■□□□□ 0.77
FOXN4-202ENST00000355216 PTPRKQ15262 1439 aa19.84■□□□□ 0.77
FOXN4-202ENST00000355216 GRIN2AQ12879 1464 aa19.83■□□□□ 0.77
FOXN4-202ENST00000355216 EPRSP07814 1512 aaKnown RBP19.83■□□□□ 0.76
FOXN4-202ENST00000355216 ARHGEF11O15085 1522 aa19.82■□□□□ 0.76
FOXN4-202ENST00000355216 ACIN1Q9UKV3 1341 aaKnown RBP19.82■□□□□ 0.76
FOXN4-202ENST00000355216 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
FOXN4-202ENST00000355216 DISP1Q96F81 1524 aa19.8■□□□□ 0.76
FOXN4-202ENST00000355216 SIN3AQ96ST3 1273 aa19.8■□□□□ 0.76
FOXN4-202ENST00000355216 ARID3CA6NKF2 412 aa19.8■□□□□ 0.76
FOXN4-202ENST00000355216 CDK13Q14004 1512 aaKnown RBP19.79■□□□□ 0.76
FOXN4-202ENST00000355216 KIAA0556O60303 1618 aa19.77■□□□□ 0.76
FOXN4-202ENST00000355216 PTPN23Q9H3S7 1636 aa19.77■□□□□ 0.76
FOXN4-202ENST00000355216 MAGI1Q96QZ7 1491 aaPredicted RBP19.77■□□□□ 0.76
FOXN4-202ENST00000355216 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
FOXN4-202ENST00000355216 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
FOXN4-202ENST00000355216 CENPBP07199 599 aaPredicted RBP19.75■□□□□ 0.75
FOXN4-202ENST00000355216 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
FOXN4-202ENST00000355216 NAIPQ13075 1403 aa19.72■□□□□ 0.75
FOXN4-202ENST00000355216 FBLN2P98095 1184 aa19.71■□□□□ 0.75
FOXN4-202ENST00000355216 TCOF1Q13428 1488 aaKnown RBP19.71■□□□□ 0.75
FOXN4-202ENST00000355216 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
FOXN4-202ENST00000355216 NUP153P49790 1475 aaKnown RBP19.68■□□□□ 0.74
FOXN4-202ENST00000355216 YTHDC1Q96MU7 727 aaKnown RBP19.68■□□□□ 0.74
FOXN4-202ENST00000355216 UACAQ9BZF9 1416 aa19.67■□□□□ 0.74
FOXN4-202ENST00000355216 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
FOXN4-202ENST00000355216 MIA2Q96PC5 1412 aa19.66■□□□□ 0.74
FOXN4-202ENST00000355216 CHIC2Q9UKJ5 165 aa19.66■□□□□ 0.74
FOXN4-202ENST00000355216 RAPGEF6Q8TEU7 1601 aa19.66■□□□□ 0.74
FOXN4-202ENST00000355216 RRP7BPQ9NSQ0 103 aa19.65■□□□□ 0.74
FOXN4-202ENST00000355216 NUP160Q12769 1436 aa19.63■□□□□ 0.73
FOXN4-202ENST00000355216 JPH4Q96JJ6 628 aa19.62■□□□□ 0.73
FOXN4-202ENST00000355216 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
FOXN4-202ENST00000355216 CDK11AQ9UQ88 783 aaPredicted RBP19.59■□□□□ 0.73
FOXN4-202ENST00000355216 PLB1Q6P1J6 1458 aa19.59■□□□□ 0.73
FOXN4-202ENST00000355216 CARMIL2Q6F5E8 1435 aa19.57■□□□□ 0.72
FOXN4-202ENST00000355216 GTF3C3Q9Y5Q9 886 aa19.56■□□□□ 0.72
FOXN4-202ENST00000355216 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
FOXN4-202ENST00000355216 GCC2Q8IWJ2 1684 aa19.55■□□□□ 0.72
FOXN4-202ENST00000355216 PRG4Q92954 1404 aaPredicted RBP19.55■□□□□ 0.72
FOXN4-202ENST00000355216 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
FOXN4-202ENST00000355216 KDM6BO15054 1643 aa19.54■□□□□ 0.72
FOXN4-202ENST00000355216 TONSLQ96HA7 1378 aa19.53■□□□□ 0.72
FOXN4-202ENST00000355216 TROQ12816 1431 aaPredicted RBP19.52■□□□□ 0.72
FOXN4-202ENST00000355216 DAPK1P53355 1430 aa19.51■□□□□ 0.71
FOXN4-202ENST00000355216 TRIM52Q96A61 297 aa19.51■□□□□ 0.71
FOXN4-202ENST00000355216 ABCC5O15440 1437 aa19.5■□□□□ 0.71
FOXN4-202ENST00000355216 DENND4BO75064 1496 aaPredicted RBP19.49■□□□□ 0.71
FOXN4-202ENST00000355216 ROCK1Q13464 1354 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms