RNA–Protein interactions for RNA: ENST00000355007.7

PTPA-204, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5 BASIC

Gene PTPA, Length 2,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-204ENST00000355007 TIMELESSQ9UNS1 1208 aa27.36■■□□□ 1.97
PTPA-204ENST00000355007 MAP3K1Q13233 1512 aa27.36■■□□□ 1.97
PTPA-204ENST00000355007 KIF27Q86VH2 1401 aa27.33■■□□□ 1.97
PTPA-204ENST00000355007 TIAM1Q13009 1591 aa27.33■■□□□ 1.97
PTPA-204ENST00000355007 MSH5O43196 834 aa27.31■■□□□ 1.96
PTPA-204ENST00000355007 TRIM52Q96A61 297 aa27.31■■□□□ 1.96
PTPA-204ENST00000355007 ANP32CO43423 234 aa27.31■■□□□ 1.96
PTPA-204ENST00000355007 FANCIQ9NVI1 1328 aa27.28■■□□□ 1.96
PTPA-204ENST00000355007 SIN3AQ96ST3 1273 aa27.28■■□□□ 1.96
PTPA-204ENST00000355007 CUX1P39880 1505 aa27.24■■□□□ 1.95
PTPA-204ENST00000355007 LRRC9Q6ZRR7 1453 aa27.2■■□□□ 1.95
PTPA-204ENST00000355007 PHLDB1Q86UU1 1377 aa27.16■■□□□ 1.94
PTPA-204ENST00000355007 HIRIP3Q9BW71 556 aaPredicted RBP27.12■■□□□ 1.93
PTPA-204ENST00000355007 CDK11AQ9UQ88 783 aaPredicted RBP27.11■■□□□ 1.93
PTPA-204ENST00000355007 CFAP43Q8NDM7 1665 aa27.09■■□□□ 1.93
PTPA-204ENST00000355007 ERICH6Q7L0X2 663 aa27.08■■□□□ 1.92
PTPA-204ENST00000355007 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
PTPA-204ENST00000355007 MYT1LQ9UL68 1186 aa27.04■■□□□ 1.92
PTPA-204ENST00000355007 ERICH6BQ5W0A0 696 aa27■■□□□ 1.91
PTPA-204ENST00000355007 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
PTPA-204ENST00000355007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.98■■□□□ 1.91
PTPA-204ENST00000355007 TONSLQ96HA7 1378 aa26.97■■□□□ 1.91
PTPA-204ENST00000355007 HNRNPUQ00839 825 aaKnown RBP eCLIP26.96■■□□□ 1.91
PTPA-204ENST00000355007 PCF11O94913 1555 aaKnown RBP26.94■■□□□ 1.9
PTPA-204ENST00000355007 IGF1RP08069 1367 aa26.94■■□□□ 1.9
PTPA-204ENST00000355007 HMGXB3Q12766 1538 aa26.92■■□□□ 1.9
PTPA-204ENST00000355007 IRX6P78412 446 aaPredicted RBP26.9■■□□□ 1.9
PTPA-204ENST00000355007 CFTRP13569 1480 aa26.89■■□□□ 1.89
PTPA-204ENST00000355007 PPP4R2Q9NY27 417 aa26.88■■□□□ 1.89
PTPA-204ENST00000355007 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
PTPA-204ENST00000355007 CCDC18Q5T9S5 1454 aa26.83■■□□□ 1.89
PTPA-204ENST00000355007 UACAQ9BZF9 1416 aa26.83■■□□□ 1.89
PTPA-204ENST00000355007 NCAPD3P42695 1498 aa26.83■■□□□ 1.88
PTPA-204ENST00000355007 FYCO1Q9BQS8 1478 aa26.8■■□□□ 1.88
PTPA-204ENST00000355007 KDM5BQ9UGL1 1544 aa26.79■■□□□ 1.88
PTPA-204ENST00000355007 HFM1A2PYH4 1435 aa26.77■■□□□ 1.88
PTPA-204ENST00000355007 PRDM2Q13029 1718 aa26.77■■□□□ 1.88
PTPA-204ENST00000355007 DEKP35659 375 aaKnown RBP26.77■■□□□ 1.88
PTPA-204ENST00000355007 PTPN23Q9H3S7 1636 aa26.75■■□□□ 1.87
PTPA-204ENST00000355007 FGD6Q6ZV73 1430 aa26.75■■□□□ 1.87
PTPA-204ENST00000355007 AQRO60306 1485 aaKnown RBP eCLIP26.73■■□□□ 1.872e-7■■■■□ 20.4
PTPA-204ENST00000355007 FGD5Q6ZNL6 1462 aa26.73■■□□□ 1.87
PTPA-204ENST00000355007 CASKIN1Q8WXD9 1431 aa26.72■■□□□ 1.87
PTPA-204ENST00000355007 NCOA2Q15596 1464 aa26.71■■□□□ 1.87
PTPA-204ENST00000355007 WASHC2AQ641Q2 1341 aa26.7■■□□□ 1.87
PTPA-204ENST00000355007 EFCAB5A4FU69 1503 aa26.69■■□□□ 1.86
PTPA-204ENST00000355007 ATP1B4Q9UN42 357 aaPredicted RBP26.66■■□□□ 1.86
PTPA-204ENST00000355007 FHOD3Q2V2M9 1422 aa26.66■■□□□ 1.86
PTPA-204ENST00000355007 CNTLNQ9NXG0 1405 aa26.65■■□□□ 1.86
PTPA-204ENST00000355007 PTPRKQ15262 1439 aa26.65■■□□□ 1.86
PTPA-204ENST00000355007 P3H3Q8IVL6 736 aa26.64■■□□□ 1.85
PTPA-204ENST00000355007 NOP58Q9Y2X3 529 aaKnown RBP26.64■■□□□ 1.85
PTPA-204ENST00000355007 NAIPQ13075 1403 aa26.63■■□□□ 1.85
PTPA-204ENST00000355007 B4GALNT3Q6L9W6 998 aa26.63■■□□□ 1.85
PTPA-204ENST00000355007 HSPA5P11021 654 aaKnown RBP26.62■■□□□ 1.85
PTPA-204ENST00000355007 ZBED9Q6R2W3 1325 aa26.61■■□□□ 1.85
PTPA-204ENST00000355007 CCDC184Q52MB2 194 aa26.58■■□□□ 1.84
PTPA-204ENST00000355007 FMN1Q68DA7 1419 aa26.56■■□□□ 1.84
PTPA-204ENST00000355007 EIF4G2P78344 907 aaKnown RBP eCLIP26.54■■□□□ 1.84
PTPA-204ENST00000355007 PRKRIP1Q9H875 184 aaPredicted RBP26.53■■□□□ 1.84
PTPA-204ENST00000355007 SNAPC4Q5SXM2 1469 aa26.51■■□□□ 1.83
PTPA-204ENST00000355007 NCOA1Q15788 1441 aa26.49■■□□□ 1.83
PTPA-204ENST00000355007 MTUS2Q5JR59 1369 aa26.49■■□□□ 1.83
PTPA-204ENST00000355007 FAM9BQ8IZU0 186 aa26.49■■□□□ 1.83
PTPA-204ENST00000355007 HECW1Q76N89 1606 aa26.49■■□□□ 1.83
PTPA-204ENST00000355007 PAK3O75914 559 aaPredicted RBP26.48■■□□□ 1.83
PTPA-204ENST00000355007 MYOM3Q5VTT5 1437 aa26.48■■□□□ 1.83
PTPA-204ENST00000355007 MRS2Q9HD23 443 aa26.47■■□□□ 1.83
PTPA-204ENST00000355007 CTTNBP2Q8WZ74 1663 aa26.47■■□□□ 1.83
PTPA-204ENST00000355007 NBR1Q14596 966 aa26.47■■□□□ 1.83
PTPA-204ENST00000355007 CCDC7Q96M83 1385 aa26.46■■□□□ 1.83
PTPA-204ENST00000355007 PRKCSHP14314 528 aaPredicted RBP26.43■■□□□ 1.82
PTPA-204ENST00000355007 DENND4BO75064 1496 aaPredicted RBP26.43■■□□□ 1.82
PTPA-204ENST00000355007 GCC2Q8IWJ2 1684 aa26.43■■□□□ 1.82
PTPA-204ENST00000355007 SMG6Q86US8 1419 aaKnown RBP26.4■■□□□ 1.82
PTPA-204ENST00000355007 SUPT6HQ7KZ85 1726 aaKnown RBP26.4■■□□□ 1.82
PTPA-204ENST00000355007 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.82
PTPA-204ENST00000355007 LRRIQ1Q96JM4 1722 aa26.39■■□□□ 1.81
PTPA-204ENST00000355007 IPO9Q96P70 1041 aaKnown RBP26.38■■□□□ 1.81
PTPA-204ENST00000355007 CUL7Q14999 1698 aa26.38■■□□□ 1.81
PTPA-204ENST00000355007 C11orf95C9JLR9 678 aaPredicted RBP26.38■■□□□ 1.81
PTPA-204ENST00000355007 ANP32AP39687 249 aaKnown RBP26.38■■□□□ 1.81
PTPA-204ENST00000355007 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
PTPA-204ENST00000355007 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
PTPA-204ENST00000355007 POLR1AO95602 1720 aaPredicted RBP26.37■■□□□ 1.81
PTPA-204ENST00000355007 EHBP1L1Q8N3D4 1523 aa26.35■■□□□ 1.81
PTPA-204ENST00000355007 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
PTPA-204ENST00000355007 RNF123Q5XPI4 1314 aa26.34■■□□□ 1.81
PTPA-204ENST00000355007 AKNAQ7Z591 1439 aa26.34■■□□□ 1.81
PTPA-204ENST00000355007 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
PTPA-204ENST00000355007 RTL5Q5HYW3 569 aaPredicted RBP26.32■■□□□ 1.8
PTPA-204ENST00000355007 UGGT2Q9NYU1 1516 aa26.31■■□□□ 1.8
PTPA-204ENST00000355007 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
PTPA-204ENST00000355007 ARHGEF11O15085 1522 aa26.3■■□□□ 1.8
PTPA-204ENST00000355007 SAMD9Q5K651 1589 aa26.3■■□□□ 1.8
PTPA-204ENST00000355007 L3MBTL2Q969R5 705 aa26.29■■□□□ 1.8
PTPA-204ENST00000355007 TCOF1Q13428 1488 aaKnown RBP26.29■■□□□ 1.8
PTPA-204ENST00000355007 CCDC136Q96JN2 1154 aa26.28■■□□□ 1.8
PTPA-204ENST00000355007 ZBTB47Q9UFB7 747 aaPredicted RBP26.28■■□□□ 1.8
PTPA-204ENST00000355007 NUDCQ9Y266 331 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms