RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CLSPNQ9HAW4 1339 aa33.11■■■□□ 2.89
NKX2-1-201ENST00000354822 TDRD9Q8NDG6 1382 aaKnown RBP33.1■■■□□ 2.89
NKX2-1-201ENST00000354822 FHAD1B1AJZ9 1412 aa33.09■■■□□ 2.89
NKX2-1-201ENST00000354822 ZNF316A6NFI3 1004 aaPredicted RBP33.09■■■□□ 2.89
NKX2-1-201ENST00000354822 CTTNBP2Q8WZ74 1663 aa33.05■■■□□ 2.88
NKX2-1-201ENST00000354822 CCNB3Q8WWL7 1395 aa33.04■■■□□ 2.88
NKX2-1-201ENST00000354822 TIAM1Q13009 1591 aa33.04■■■□□ 2.88
NKX2-1-201ENST00000354822 EFCAB5A4FU69 1503 aa32.97■■■□□ 2.87
NKX2-1-201ENST00000354822 LRRC9Q6ZRR7 1453 aa32.93■■■□□ 2.86
NKX2-1-201ENST00000354822 DHX57Q6P158 1386 aaKnown RBP32.92■■■□□ 2.86
NKX2-1-201ENST00000354822 WDR62O43379 1518 aa32.91■■■□□ 2.86
NKX2-1-201ENST00000354822 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
NKX2-1-201ENST00000354822 AQRO60306 1485 aaKnown RBP eCLIP32.85■■■□□ 2.85
NKX2-1-201ENST00000354822 CFAP43Q8NDM7 1665 aa32.84■■■□□ 2.85
NKX2-1-201ENST00000354822 IFT140Q96RY7 1462 aa32.82■■■□□ 2.84
NKX2-1-201ENST00000354822 FYCO1Q9BQS8 1478 aa32.82■■■□□ 2.84
NKX2-1-201ENST00000354822 PCF11O94913 1555 aaKnown RBP32.82■■■□□ 2.84
NKX2-1-201ENST00000354822 P3H3Q8IVL6 736 aa32.8■■■□□ 2.84
NKX2-1-201ENST00000354822 CASKIN1Q8WXD9 1431 aa32.8■■■□□ 2.84
NKX2-1-201ENST00000354822 FHOD3Q2V2M9 1422 aa32.79■■■□□ 2.84
NKX2-1-201ENST00000354822 FMN1Q68DA7 1419 aa32.76■■■□□ 2.83
NKX2-1-201ENST00000354822 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
NKX2-1-201ENST00000354822 GRIN2BQ13224 1484 aa32.74■■■□□ 2.83
NKX2-1-201ENST00000354822 ADAMTS12P58397 1594 aa32.74■■■□□ 2.83
NKX2-1-201ENST00000354822 SAMD9Q5K651 1589 aa32.72■■■□□ 2.83
NKX2-1-201ENST00000354822 PHLDB1Q86UU1 1377 aa32.71■■■□□ 2.83
NKX2-1-201ENST00000354822 ATP1B4Q9UN42 357 aaPredicted RBP32.68■■■□□ 2.82
NKX2-1-201ENST00000354822 ITGAEP38570 1179 aa32.66■■■□□ 2.82
NKX2-1-201ENST00000354822 THOC2Q8NI27 1593 aaKnown RBP32.66■■■□□ 2.82
NKX2-1-201ENST00000354822 ZNF608Q9ULD9 1512 aaPredicted RBP32.65■■■□□ 2.82
NKX2-1-201ENST00000354822 CENPBP07199 599 aaPredicted RBP32.62■■■□□ 2.81
NKX2-1-201ENST00000354822 ACIN1Q9UKV3 1341 aaKnown RBP32.61■■■□□ 2.81
NKX2-1-201ENST00000354822 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.61■■■□□ 2.81
NKX2-1-201ENST00000354822 RAB3GAP2Q9H2M9 1393 aa32.6■■■□□ 2.81
NKX2-1-201ENST00000354822 SETD5Q9C0A6 1442 aa32.6■■■□□ 2.81
NKX2-1-201ENST00000354822 SCAF1Q9H7N4 1312 aaKnown RBP32.58■■■□□ 2.81
NKX2-1-201ENST00000354822 SNAPC4Q5SXM2 1469 aa32.57■■■□□ 2.8
NKX2-1-201ENST00000354822 FAM50AQ14320 339 aaKnown RBP32.55■■■□□ 2.8
NKX2-1-201ENST00000354822 EIF4G3O43432 1585 aaKnown RBP32.54■■■□□ 2.8
NKX2-1-201ENST00000354822 IQGAP2Q13576 1575 aa32.53■■■□□ 2.8
NKX2-1-201ENST00000354822 NEUROD1Q13562 356 aa32.46■■■□□ 2.79
NKX2-1-201ENST00000354822 MTUS2Q5JR59 1369 aa32.44■■■□□ 2.78
NKX2-1-201ENST00000354822 MIER1Q8N108 512 aa32.39■■■□□ 2.78
NKX2-1-201ENST00000354822 LRRIQ1Q96JM4 1722 aa32.39■■■□□ 2.78
NKX2-1-201ENST00000354822 MAPKBP1O60336 1514 aa32.39■■■□□ 2.78
NKX2-1-201ENST00000354822 FGD6Q6ZV73 1430 aa32.38■■■□□ 2.77
NKX2-1-201ENST00000354822 UGGT2Q9NYU1 1516 aa32.38■■■□□ 2.77
NKX2-1-201ENST00000354822 MAGI1Q96QZ7 1491 aaPredicted RBP32.37■■■□□ 2.77
NKX2-1-201ENST00000354822 GRIN2AQ12879 1464 aa32.36■■■□□ 2.77
NKX2-1-201ENST00000354822 KIAA0586Q9BVV6 1533 aa32.34■■■□□ 2.77
NKX2-1-201ENST00000354822 CCDC18Q5T9S5 1454 aa32.3■■■□□ 2.76
NKX2-1-201ENST00000354822 EHBP1L1Q8N3D4 1523 aa32.29■■■□□ 2.76
NKX2-1-201ENST00000354822 TIMELESSQ9UNS1 1208 aa32.26■■■□□ 2.76
NKX2-1-201ENST00000354822 NCOA2Q15596 1464 aa32.26■■■□□ 2.76
NKX2-1-201ENST00000354822 SUPT6HQ7KZ85 1726 aaKnown RBP32.26■■■□□ 2.76
NKX2-1-201ENST00000354822 HECW1Q76N89 1606 aa32.26■■■□□ 2.75
NKX2-1-201ENST00000354822 SYNJ2O15056 1496 aa32.25■■■□□ 2.75
NKX2-1-201ENST00000354822 MYOM3Q5VTT5 1437 aa32.25■■■□□ 2.75
NKX2-1-201ENST00000354822 KIAA0556O60303 1618 aa32.2■■■□□ 2.74
NKX2-1-201ENST00000354822 CHMP7Q8WUX9 453 aaPredicted RBP32.17■■■□□ 2.74
NKX2-1-201ENST00000354822 DISP1Q96F81 1524 aa32.17■■■□□ 2.74
NKX2-1-201ENST00000354822 ARHGEF11O15085 1522 aa32.16■■■□□ 2.74
NKX2-1-201ENST00000354822 HFM1A2PYH4 1435 aa32.15■■■□□ 2.74
NKX2-1-201ENST00000354822 CEP170Q5SW79 1584 aa32.15■■■□□ 2.74
NKX2-1-201ENST00000354822 EPRSP07814 1512 aaKnown RBP32.12■■■□□ 2.73
NKX2-1-201ENST00000354822 GTF3C3Q9Y5Q9 886 aa32.11■■■□□ 2.73
NKX2-1-201ENST00000354822 MAGI3Q5TCQ9 1506 aa32.09■■■□□ 2.73
NKX2-1-201ENST00000354822 YTHDC1Q96MU7 727 aaKnown RBP32.08■■■□□ 2.73
NKX2-1-201ENST00000354822 NUP160Q12769 1436 aa32.07■■■□□ 2.72
NKX2-1-201ENST00000354822 PTPRKQ15262 1439 aa32.07■■■□□ 2.72
NKX2-1-201ENST00000354822 SIN3AQ96ST3 1273 aa32.07■■■□□ 2.72
NKX2-1-201ENST00000354822 PTPN23Q9H3S7 1636 aa32.06■■■□□ 2.72
NKX2-1-201ENST00000354822 UACAQ9BZF9 1416 aa32.04■■■□□ 2.72
NKX2-1-201ENST00000354822 TCOF1Q13428 1488 aaKnown RBP32.03■■■□□ 2.72
NKX2-1-201ENST00000354822 FBLN2P98095 1184 aa32.02■■■□□ 2.72
NKX2-1-201ENST00000354822 CDK13Q14004 1512 aaKnown RBP32.01■■■□□ 2.71
NKX2-1-201ENST00000354822 NAIPQ13075 1403 aa32.01■■■□□ 2.71
NKX2-1-201ENST00000354822 RAPGEF6Q8TEU7 1601 aa31.98■■■□□ 2.71
NKX2-1-201ENST00000354822 MIA2Q96PC5 1412 aa31.98■■■□□ 2.71
NKX2-1-201ENST00000354822 PPP1R15AO75807 674 aaPredicted RBP31.93■■■□□ 2.7
NKX2-1-201ENST00000354822 NUP153P49790 1475 aaKnown RBP31.92■■■□□ 2.7
NKX2-1-201ENST00000354822 CARMIL2Q6F5E8 1435 aa31.92■■■□□ 2.7
NKX2-1-201ENST00000354822 AKNAQ7Z591 1439 aa31.9■■■□□ 2.7
NKX2-1-201ENST00000354822 JPH4Q96JJ6 628 aa31.9■■■□□ 2.7
NKX2-1-201ENST00000354822 TONSLQ96HA7 1378 aa31.83■■■□□ 2.69
NKX2-1-201ENST00000354822 ARID3CA6NKF2 412 aa31.83■■■□□ 2.69
NKX2-1-201ENST00000354822 CDK11AQ9UQ88 783 aaPredicted RBP31.83■■■□□ 2.69
NKX2-1-201ENST00000354822 GCC2Q8IWJ2 1684 aa31.81■■■□□ 2.68
NKX2-1-201ENST00000354822 PELP1Q8IZL8 1130 aaKnown RBP31.8■■■□□ 2.68
NKX2-1-201ENST00000354822 PLB1Q6P1J6 1458 aa31.76■■■□□ 2.68
NKX2-1-201ENST00000354822 RRP7BPQ9NSQ0 103 aa31.75■■■□□ 2.67
NKX2-1-201ENST00000354822 CHIC2Q9UKJ5 165 aa31.73■■■□□ 2.67
NKX2-1-201ENST00000354822 CHD1O14646 1710 aa31.73■■■□□ 2.67
NKX2-1-201ENST00000354822 ROCK1Q13464 1354 aa31.68■■■□□ 2.66
NKX2-1-201ENST00000354822 ABCA8O94911 1581 aa31.68■■■□□ 2.66
NKX2-1-201ENST00000354822 TROQ12816 1431 aaPredicted RBP31.68■■■□□ 2.66
NKX2-1-201ENST00000354822 DAPK1P53355 1430 aa31.63■■■□□ 2.65
NKX2-1-201ENST00000354822 TRIM52Q96A61 297 aa31.63■■■□□ 2.65
NKX2-1-201ENST00000354822 ADCY10Q96PN6 1610 aa31.62■■■□□ 2.65
NKX2-1-201ENST00000354822 DDX10Q13206 875 aaKnown RBP31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms