RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 KIAA0586Q9BVV6 1533 aa31.77■■■□□ 2.68
VPS72-201ENST00000354473 RAPGEF2Q9Y4G8 1499 aa31.75■■■□□ 2.67
VPS72-201ENST00000354473 PRG4Q92954 1404 aaPredicted RBP31.74■■■□□ 2.67
VPS72-201ENST00000354473 JPH4Q96JJ6 628 aa31.74■■■□□ 2.67
VPS72-201ENST00000354473 CHIC1Q5VXU3 224 aa31.64■■■□□ 2.66
VPS72-201ENST00000354473 IQGAP2Q13576 1575 aa31.61■■■□□ 2.65
VPS72-201ENST00000354473 PRXQ9BXM0 1461 aa31.61■■■□□ 2.65
VPS72-201ENST00000354473 EEA1Q15075 1411 aa31.56■■■□□ 2.64
VPS72-201ENST00000354473 CSRNP3Q8WYN3 585 aa31.52■■■□□ 2.64
VPS72-201ENST00000354473 CTTNBP2Q8WZ74 1663 aa31.51■■■□□ 2.63
VPS72-201ENST00000354473 FAM9AQ8IZU1 332 aaPredicted RBP31.45■■■□□ 2.62
VPS72-201ENST00000354473 CARMIL2Q6F5E8 1435 aa31.43■■■□□ 2.62
VPS72-201ENST00000354473 UGGT2Q9NYU1 1516 aa31.42■■■□□ 2.62
VPS72-201ENST00000354473 DISP1Q96F81 1524 aa31.38■■■□□ 2.61
VPS72-201ENST00000354473 TNIKQ9UKE5 1360 aa31.33■■■□□ 2.61
VPS72-201ENST00000354473 PTPRGP23470 1445 aa31.32■■■□□ 2.6
VPS72-201ENST00000354473 KIAA0556O60303 1618 aa31.32■■■□□ 2.6
VPS72-201ENST00000354473 ADCY10Q96PN6 1610 aa31.3■■■□□ 2.6
VPS72-201ENST00000354473 TRHP20396 242 aaPredicted RBP31.3■■■□□ 2.6
VPS72-201ENST00000354473 TTBK1Q5TCY1 1321 aaPredicted RBP31.29■■■□□ 2.6
VPS72-201ENST00000354473 KIF21BO75037 1637 aa31.29■■■□□ 2.6
VPS72-201ENST00000354473 GOLGA3Q08378 1498 aa31.23■■■□□ 2.59
VPS72-201ENST00000354473 NPM1P06748 294 aaKnown RBP eCLIP31.15■■■□□ 2.58
VPS72-201ENST00000354473 UACAQ9BZF9 1416 aa31.12■■■□□ 2.57
VPS72-201ENST00000354473 UHRF1BP1LA0JNW5 1464 aa31.1■■■□□ 2.57
VPS72-201ENST00000354473 MAPKBP1O60336 1514 aa31.09■■■□□ 2.57
VPS72-201ENST00000354473 ABCC2Q92887 1545 aa31.09■■■□□ 2.57
VPS72-201ENST00000354473 SAMD9Q5K651 1589 aa31.07■■■□□ 2.56
VPS72-201ENST00000354473 EHMT2Q96KQ7 1210 aa31.07■■■□□ 2.56
VPS72-201ENST00000354473 P3H3Q8IVL6 736 aa31.01■■■□□ 2.56
VPS72-201ENST00000354473 KIF13AQ9H1H9 1805 aa31■■■□□ 2.55
VPS72-201ENST00000354473 RANGAP1P46060 587 aaPredicted RBP31■■■□□ 2.55
VPS72-201ENST00000354473 PLB1Q6P1J6 1458 aa31■■■□□ 2.55
VPS72-201ENST00000354473 UBTFP17480 764 aaKnown RBP30.98■■■□□ 2.55
VPS72-201ENST00000354473 ABCA8O94911 1581 aa30.96■■■□□ 2.55
VPS72-201ENST00000354473 KDM5BQ9UGL1 1544 aa30.95■■■□□ 2.55
VPS72-201ENST00000354473 ABCC10Q5T3U5 1492 aa30.94■■■□□ 2.54
VPS72-201ENST00000354473 DIP2BQ9P265 1576 aa30.93■■■□□ 2.54
VPS72-201ENST00000354473 ZCCHC11Q5TAX3 1644 aaKnown RBP30.93■■■□□ 2.54
VPS72-201ENST00000354473 EFCAB5A4FU69 1503 aa30.91■■■□□ 2.54
VPS72-201ENST00000354473 ASXL2Q76L83 1435 aa30.89■■■□□ 2.54
VPS72-201ENST00000354473 FHOD3Q2V2M9 1422 aa30.87■■■□□ 2.53
VPS72-201ENST00000354473 FAM69CQ0P6D2 419 aa30.87■■■□□ 2.53
VPS72-201ENST00000354473 RAPGEF6Q8TEU7 1601 aa30.8■■■□□ 2.52
VPS72-201ENST00000354473 ARHGAP35Q9NRY4 1499 aa30.73■■■□□ 2.51
VPS72-201ENST00000354473 WDR7Q9Y4E6 1490 aa30.73■■■□□ 2.51
VPS72-201ENST00000354473 ARID3CA6NKF2 412 aa30.73■■■□□ 2.51
VPS72-201ENST00000354473 GLI2P10070 1586 aa30.72■■■□□ 2.51
VPS72-201ENST00000354473 TSPOAP1O95153 1857 aa30.7■■■□□ 2.51
VPS72-201ENST00000354473 EPRSP07814 1512 aaKnown RBP30.7■■■□□ 2.51
VPS72-201ENST00000354473 ATP10BO94823 1461 aa30.68■■■□□ 2.5
VPS72-201ENST00000354473 NUP153P49790 1475 aaKnown RBP30.68■■■□□ 2.5
VPS72-201ENST00000354473 FMN1Q68DA7 1419 aa30.61■■■□□ 2.49
VPS72-201ENST00000354473 MAP3K4Q9Y6R4 1608 aa30.6■■■□□ 2.49
VPS72-201ENST00000354473 PPRC1Q5VV67 1664 aaKnown RBP30.57■■■□□ 2.48
VPS72-201ENST00000354473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.56■■■□□ 2.48
VPS72-201ENST00000354473 HNRNPUL2Q1KMD3 747 aaKnown RBP30.56■■■□□ 2.48
VPS72-201ENST00000354473 KCNH8Q96L42 1107 aa30.55■■■□□ 2.48
VPS72-201ENST00000354473 CLIP1P30622 1438 aa30.52■■■□□ 2.48
VPS72-201ENST00000354473 HECW1Q76N89 1606 aa30.52■■■□□ 2.48
VPS72-201ENST00000354473 CFAP43Q8NDM7 1665 aa30.49■■■□□ 2.47
VPS72-201ENST00000354473 KDM6BO15054 1643 aa30.47■■■□□ 2.47
VPS72-201ENST00000354473 CDK13Q14004 1512 aaKnown RBP30.47■■■□□ 2.47
VPS72-201ENST00000354473 ATP1B4Q9UN42 357 aaPredicted RBP30.45■■■□□ 2.46
VPS72-201ENST00000354473 TEX14Q8IWB6 1497 aa30.44■■■□□ 2.46
VPS72-201ENST00000354473 CD109Q6YHK3 1445 aa30.44■■■□□ 2.46
VPS72-201ENST00000354473 PCF11O94913 1555 aaKnown RBP30.41■■■□□ 2.46
VPS72-201ENST00000354473 ABCA9Q8IUA7 1624 aa30.4■■■□□ 2.46
VPS72-201ENST00000354473 PLEKHD1A6NEE1 506 aa30.39■■■□□ 2.46
VPS72-201ENST00000354473 MAGI3Q5TCQ9 1506 aa30.38■■■□□ 2.45
VPS72-201ENST00000354473 CEP162Q5TB80 1403 aa30.37■■■□□ 2.45
VPS72-201ENST00000354473 LRRIQ1Q96JM4 1722 aa30.36■■■□□ 2.45
VPS72-201ENST00000354473 CASKIN1Q8WXD9 1431 aa30.36■■■□□ 2.45
VPS72-201ENST00000354473 LOC105371045A0A1W2PR82 267 aa30.35■■■□□ 2.45
VPS72-201ENST00000354473 FYCO1Q9BQS8 1478 aa30.3■■■□□ 2.44
VPS72-201ENST00000354473 CCDC18Q5T9S5 1454 aa30.26■■■□□ 2.43
VPS72-201ENST00000354473 COL17A1Q9UMD9 1497 aaPredicted RBP30.25■■■□□ 2.43
VPS72-201ENST00000354473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.25■■■□□ 2.43
VPS72-201ENST00000354473 CDK11AQ9UQ88 783 aaPredicted RBP30.24■■■□□ 2.43
VPS72-201ENST00000354473 TTC37Q6PGP7 1564 aa30.24■■■□□ 2.43
VPS72-201ENST00000354473 TROQ12816 1431 aaPredicted RBP30.19■■■□□ 2.42
VPS72-201ENST00000354473 KIF14Q15058 1648 aa30.17■■■□□ 2.42
VPS72-201ENST00000354473 NEO1Q92859 1461 aa30.14■■■□□ 2.42
VPS72-201ENST00000354473 ARAP3Q8WWN8 1544 aa30.12■■■□□ 2.41
VPS72-201ENST00000354473 PHLDB1Q86UU1 1377 aa30.11■■■□□ 2.41
VPS72-201ENST00000354473 CFAP74Q9C0B2 1584 aa30.09■■■□□ 2.41
VPS72-201ENST00000354473 MYO5CQ9NQX4 1742 aa30.09■■■□□ 2.41
VPS72-201ENST00000354473 FANCAO15360 1455 aa30.08■■■□□ 2.41
VPS72-201ENST00000354473 PLCH2O75038 1416 aa30.04■■■□□ 2.4
VPS72-201ENST00000354473 AKNAQ7Z591 1439 aa30.01■■■□□ 2.4
VPS72-201ENST00000354473 VPS8Q8N3P4 1428 aa29.99■■■□□ 2.39
VPS72-201ENST00000354473 FRMPD1Q5SYB0 1578 aa29.97■■■□□ 2.39
VPS72-201ENST00000354473 RAPGEF3O95398 923 aa29.96■■■□□ 2.39
VPS72-201ENST00000354473 ARHGAP5Q13017 1502 aa29.94■■■□□ 2.38
VPS72-201ENST00000354473 MTUS2Q5JR59 1369 aa29.94■■■□□ 2.38
VPS72-201ENST00000354473 PREX2Q70Z35 1606 aa29.93■■■□□ 2.38
VPS72-201ENST00000354473 DENND4BO75064 1496 aaPredicted RBP29.93■■■□□ 2.38
VPS72-201ENST00000354473 RICTORQ6R327 1708 aa29.92■■■□□ 2.38
VPS72-201ENST00000354473 CDC42BPBQ9Y5S2 1711 aa29.91■■■□□ 2.38
VPS72-201ENST00000354473 ADGRL1O94910 1474 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms