RNA–Protein interactions for RNA: ENST00000354376.3

C9orf163-201, Transcript of chromosome 9 open reading frame 163, humanhuman

Gene C9orf163, Length 2,572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf163-201ENST00000354376 ABCA5Q8WWZ7 1642 aa33.75■■■□□ 2.99
C9orf163-201ENST00000354376 TIAM1Q13009 1591 aa33.74■■■□□ 2.99
C9orf163-201ENST00000354376 ITGAEP38570 1179 aa33.73■■■□□ 2.99
C9orf163-201ENST00000354376 PCF11O94913 1555 aaKnown RBP33.69■■■□□ 2.98
C9orf163-201ENST00000354376 CCNB3Q8WWL7 1395 aa33.68■■■□□ 2.98
C9orf163-201ENST00000354376 CTTNBP2Q8WZ74 1663 aa33.65■■■□□ 2.98
C9orf163-201ENST00000354376 TARBP1Q13395 1621 aaKnown RBP33.64■■■□□ 2.98
C9orf163-201ENST00000354376 FHAD1B1AJZ9 1412 aa33.63■■■□□ 2.97
C9orf163-201ENST00000354376 LRRC9Q6ZRR7 1453 aa33.63■■■□□ 2.97
C9orf163-201ENST00000354376 MAP3K1Q13233 1512 aa33.58■■■□□ 2.97
C9orf163-201ENST00000354376 PHLDB1Q86UU1 1377 aa33.57■■■□□ 2.96
C9orf163-201ENST00000354376 AQRO60306 1485 aaKnown RBP eCLIP33.57■■■□□ 2.96
C9orf163-201ENST00000354376 DIEXFQ68CQ4 756 aaKnown RBP33.55■■■□□ 2.96
C9orf163-201ENST00000354376 DHX57Q6P158 1386 aaKnown RBP33.55■■■□□ 2.96
C9orf163-201ENST00000354376 EFCAB5A4FU69 1503 aa33.54■■■□□ 2.96
C9orf163-201ENST00000354376 MRC2Q9UBG0 1479 aa33.5■■■□□ 2.95
C9orf163-201ENST00000354376 CFAP43Q8NDM7 1665 aa33.48■■■□□ 2.95
C9orf163-201ENST00000354376 CASKIN1Q8WXD9 1431 aa33.47■■■□□ 2.95
C9orf163-201ENST00000354376 ZNF316A6NFI3 1004 aaPredicted RBP33.46■■■□□ 2.95
C9orf163-201ENST00000354376 FYCO1Q9BQS8 1478 aa33.45■■■□□ 2.95
C9orf163-201ENST00000354376 FAM50AQ14320 339 aaKnown RBP33.44■■■□□ 2.94
C9orf163-201ENST00000354376 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
C9orf163-201ENST00000354376 ZNF608Q9ULD9 1512 aaPredicted RBP33.39■■■□□ 2.94
C9orf163-201ENST00000354376 SNAPC4Q5SXM2 1469 aa33.38■■■□□ 2.93
C9orf163-201ENST00000354376 SAMD9Q5K651 1589 aa33.37■■■□□ 2.93
C9orf163-201ENST00000354376 FMN1Q68DA7 1419 aa33.37■■■□□ 2.93
C9orf163-201ENST00000354376 RAB3GAP2Q9H2M9 1393 aa33.31■■■□□ 2.92
C9orf163-201ENST00000354376 LRRIQ1Q96JM4 1722 aa33.28■■■□□ 2.92
C9orf163-201ENST00000354376 ADAMTS12P58397 1594 aa33.26■■■□□ 2.92
C9orf163-201ENST00000354376 GRIN2BQ13224 1484 aa33.24■■■□□ 2.91
C9orf163-201ENST00000354376 WDR62O43379 1518 aa33.23■■■□□ 2.91
C9orf163-201ENST00000354376 CLSPNQ9HAW4 1339 aa33.23■■■□□ 2.91
C9orf163-201ENST00000354376 IFT140Q96RY7 1462 aa33.2■■■□□ 2.91
C9orf163-201ENST00000354376 MTUS2Q5JR59 1369 aa33.2■■■□□ 2.91
C9orf163-201ENST00000354376 ERCC6Q03468 1493 aa33.18■■■□□ 2.9
C9orf163-201ENST00000354376 SETD5Q9C0A6 1442 aa33.17■■■□□ 2.9
C9orf163-201ENST00000354376 ARID3CA6NKF2 412 aa33.15■■■□□ 2.9
C9orf163-201ENST00000354376 IQGAP2Q13576 1575 aa33.14■■■□□ 2.9
C9orf163-201ENST00000354376 SCAF1Q9H7N4 1312 aaKnown RBP33.09■■■□□ 2.89
C9orf163-201ENST00000354376 FGD6Q6ZV73 1430 aa33.09■■■□□ 2.89
C9orf163-201ENST00000354376 MAPKBP1O60336 1514 aa33.08■■■□□ 2.89
C9orf163-201ENST00000354376 MAGI3Q5TCQ9 1506 aa33.06■■■□□ 2.88
C9orf163-201ENST00000354376 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
C9orf163-201ENST00000354376 NCOA2Q15596 1464 aa33.04■■■□□ 2.88
C9orf163-201ENST00000354376 PTPRKQ15262 1439 aa32.99■■■□□ 2.87
C9orf163-201ENST00000354376 MIER1Q8N108 512 aa32.99■■■□□ 2.87
C9orf163-201ENST00000354376 THOC2Q8NI27 1593 aaKnown RBP32.98■■■□□ 2.87
C9orf163-201ENST00000354376 SIN3AQ96ST3 1273 aa32.97■■■□□ 2.87
C9orf163-201ENST00000354376 CDK13Q14004 1512 aaKnown RBP32.95■■■□□ 2.87
C9orf163-201ENST00000354376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.94■■■□□ 2.86
C9orf163-201ENST00000354376 MYOM3Q5VTT5 1437 aa32.93■■■□□ 2.86
C9orf163-201ENST00000354376 NEUROD1Q13562 356 aa32.93■■■□□ 2.86
C9orf163-201ENST00000354376 GRIN2AQ12879 1464 aa32.92■■■□□ 2.86
C9orf163-201ENST00000354376 FBLN2P98095 1184 aa32.92■■■□□ 2.86
C9orf163-201ENST00000354376 EHBP1L1Q8N3D4 1523 aa32.92■■■□□ 2.86
C9orf163-201ENST00000354376 UGGT2Q9NYU1 1516 aa32.92■■■□□ 2.86
C9orf163-201ENST00000354376 EPRSP07814 1512 aaKnown RBP32.91■■■□□ 2.86
C9orf163-201ENST00000354376 SUPT6HQ7KZ85 1726 aaKnown RBP32.91■■■□□ 2.86
C9orf163-201ENST00000354376 KIAA0586Q9BVV6 1533 aa32.89■■■□□ 2.86
C9orf163-201ENST00000354376 HECW1Q76N89 1606 aa32.88■■■□□ 2.85
C9orf163-201ENST00000354376 DISP1Q96F81 1524 aa32.88■■■□□ 2.85
C9orf163-201ENST00000354376 CCDC18Q5T9S5 1454 aa32.86■■■□□ 2.85
C9orf163-201ENST00000354376 CHMP7Q8WUX9 453 aaPredicted RBP32.86■■■□□ 2.85
C9orf163-201ENST00000354376 ARHGEF11O15085 1522 aa32.82■■■□□ 2.84
C9orf163-201ENST00000354376 ACIN1Q9UKV3 1341 aaKnown RBP32.81■■■□□ 2.84
C9orf163-201ENST00000354376 YTHDC1Q96MU7 727 aaKnown RBP32.81■■■□□ 2.84
C9orf163-201ENST00000354376 KIAA0556O60303 1618 aa32.81■■■□□ 2.84
C9orf163-201ENST00000354376 PTPN23Q9H3S7 1636 aa32.79■■■□□ 2.84
C9orf163-201ENST00000354376 CHIC2Q9UKJ5 165 aa32.77■■■□□ 2.84
C9orf163-201ENST00000354376 CEP170Q5SW79 1584 aa32.76■■■□□ 2.83
C9orf163-201ENST00000354376 MAGI1Q96QZ7 1491 aaPredicted RBP32.74■■■□□ 2.83
C9orf163-201ENST00000354376 HFM1A2PYH4 1435 aa32.72■■■□□ 2.83
C9orf163-201ENST00000354376 RRP7BPQ9NSQ0 103 aa32.72■■■□□ 2.83
C9orf163-201ENST00000354376 SYNJ2O15056 1496 aa32.72■■■□□ 2.83
C9orf163-201ENST00000354376 NAIPQ13075 1403 aa32.7■■■□□ 2.83
C9orf163-201ENST00000354376 NUP153P49790 1475 aaKnown RBP32.69■■■□□ 2.82
C9orf163-201ENST00000354376 CENPBP07199 599 aaPredicted RBP32.63■■■□□ 2.81
C9orf163-201ENST00000354376 TCOF1Q13428 1488 aaKnown RBP32.61■■■□□ 2.81
C9orf163-201ENST00000354376 RAPGEF6Q8TEU7 1601 aa32.61■■■□□ 2.81
C9orf163-201ENST00000354376 PLB1Q6P1J6 1458 aa32.61■■■□□ 2.81
C9orf163-201ENST00000354376 MYT1Q01538 1121 aa32.6■■■□□ 2.81
C9orf163-201ENST00000354376 JPH4Q96JJ6 628 aa32.6■■■□□ 2.81
C9orf163-201ENST00000354376 ZNF644Q9H582 1327 aaPredicted RBP32.58■■■□□ 2.81
C9orf163-201ENST00000354376 UACAQ9BZF9 1416 aa32.57■■■□□ 2.8
C9orf163-201ENST00000354376 NUP160Q12769 1436 aa32.54■■■□□ 2.8
C9orf163-201ENST00000354376 PRG4Q92954 1404 aaPredicted RBP32.53■■■□□ 2.8
C9orf163-201ENST00000354376 KDM6BO15054 1643 aa32.52■■■□□ 2.8
C9orf163-201ENST00000354376 HIRIP3Q9BW71 556 aaPredicted RBP32.51■■■□□ 2.79
C9orf163-201ENST00000354376 MIA2Q96PC5 1412 aa32.5■■■□□ 2.79
C9orf163-201ENST00000354376 PPP1R15AO75807 674 aaPredicted RBP32.48■■■□□ 2.79
C9orf163-201ENST00000354376 GTF3C3Q9Y5Q9 886 aa32.47■■■□□ 2.79
C9orf163-201ENST00000354376 TRIM52Q96A61 297 aa32.45■■■□□ 2.78
C9orf163-201ENST00000354376 CDK11AQ9UQ88 783 aaPredicted RBP32.42■■■□□ 2.78
C9orf163-201ENST00000354376 CARMIL2Q6F5E8 1435 aa32.42■■■□□ 2.78
C9orf163-201ENST00000354376 TIMELESSQ9UNS1 1208 aa32.39■■■□□ 2.78
C9orf163-201ENST00000354376 TONSLQ96HA7 1378 aa32.39■■■□□ 2.78
C9orf163-201ENST00000354376 DENND4BO75064 1496 aaPredicted RBP32.39■■■□□ 2.78
C9orf163-201ENST00000354376 GCC2Q8IWJ2 1684 aa32.38■■■□□ 2.77
C9orf163-201ENST00000354376 DAPK1P53355 1430 aa32.37■■■□□ 2.77
C9orf163-201ENST00000354376 TROQ12816 1431 aaPredicted RBP32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms