RNA–Protein interactions for RNA: ENST00000349736.9

CSNK2A1-202, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-202ENST00000349736 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
CSNK2A1-202ENST00000349736 IGF1RP08069 1367 aa13.4□□□□□ -0.26
CSNK2A1-202ENST00000349736 KCNH8Q96L42 1107 aa13.39□□□□□ -0.27
CSNK2A1-202ENST00000349736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.27
CSNK2A1-202ENST00000349736 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
CSNK2A1-202ENST00000349736 TONSLQ96HA7 1378 aa13.38□□□□□ -0.27
CSNK2A1-202ENST00000349736 KDM2AQ9Y2K7 1162 aa13.38□□□□□ -0.27
CSNK2A1-202ENST00000349736 ANP32CO43423 234 aa13.38□□□□□ -0.27
CSNK2A1-202ENST00000349736 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
CSNK2A1-202ENST00000349736 IRX6P78412 446 aaPredicted RBP13.34□□□□□ -0.27
CSNK2A1-202ENST00000349736 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.27
CSNK2A1-202ENST00000349736 RAB3GAP2Q9H2M9 1393 aa13.33□□□□□ -0.28
CSNK2A1-202ENST00000349736 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
CSNK2A1-202ENST00000349736 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
CSNK2A1-202ENST00000349736 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
CSNK2A1-202ENST00000349736 ARAP1Q96P48 1450 aa13.32□□□□□ -0.28
CSNK2A1-202ENST00000349736 FAM9BQ8IZU0 186 aa13.31□□□□□ -0.28
CSNK2A1-202ENST00000349736 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
CSNK2A1-202ENST00000349736 KIF21BO75037 1637 aa13.29□□□□□ -0.28
CSNK2A1-202ENST00000349736 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
CSNK2A1-202ENST00000349736 CUX1P39880 1505 aa13.29□□□□□ -0.28
CSNK2A1-202ENST00000349736 FKBP8Q14318 412 aa13.28□□□□□ -0.28
CSNK2A1-202ENST00000349736 RGL3Q3MIN7 710 aa13.28□□□□□ -0.28
CSNK2A1-202ENST00000349736 DHX57Q6P158 1386 aaKnown RBP13.26□□□□□ -0.29
CSNK2A1-202ENST00000349736 HNRNPUQ00839 825 aaKnown RBP eCLIP13.26□□□□□ -0.29
CSNK2A1-202ENST00000349736 CFDP1Q9UEE9 299 aaPredicted RBP13.25□□□□□ -0.29
CSNK2A1-202ENST00000349736 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
CSNK2A1-202ENST00000349736 CFTRP13569 1480 aa13.24□□□□□ -0.29
CSNK2A1-202ENST00000349736 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
CSNK2A1-202ENST00000349736 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.299e-8■■■□□ 18.2
CSNK2A1-202ENST00000349736 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
CSNK2A1-202ENST00000349736 ARHGAP35Q9NRY4 1499 aa13.2□□□□□ -0.3
CSNK2A1-202ENST00000349736 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
CSNK2A1-202ENST00000349736 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
CSNK2A1-202ENST00000349736 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
CSNK2A1-202ENST00000349736 CC2D2AQ9P2K1 1620 aa13.18□□□□□ -0.3
CSNK2A1-202ENST00000349736 FHAD1B1AJZ9 1412 aa13.18□□□□□ -0.3
CSNK2A1-202ENST00000349736 TSPY4P0CV99 314 aa13.18□□□□□ -0.3
CSNK2A1-202ENST00000349736 TSPY10P0CW01 314 aa13.18□□□□□ -0.3
CSNK2A1-202ENST00000349736 PRXQ9BXM0 1461 aa13.18□□□□□ -0.3
CSNK2A1-202ENST00000349736 CHGAP10645 457 aaKnown RBP13.16□□□□□ -0.3
CSNK2A1-202ENST00000349736 PLPPR3Q6T4P5 718 aa13.13□□□□□ -0.31
CSNK2A1-202ENST00000349736 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
CSNK2A1-202ENST00000349736 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
CSNK2A1-202ENST00000349736 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
CSNK2A1-202ENST00000349736 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
CSNK2A1-202ENST00000349736 HNRNPMP52272 730 aaKnown RBP eCLIP13.1□□□□□ -0.312e-7■■□□□ 14.5
CSNK2A1-202ENST00000349736 JPH4Q96JJ6 628 aa13.1□□□□□ -0.31
CSNK2A1-202ENST00000349736 MPHOSPH9Q99550 1183 aa13.1□□□□□ -0.31
CSNK2A1-202ENST00000349736 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
CSNK2A1-202ENST00000349736 L3MBTL2Q969R5 705 aa13.09□□□□□ -0.31
CSNK2A1-202ENST00000349736 HSPA5P11021 654 aaKnown RBP13.09□□□□□ -0.31
CSNK2A1-202ENST00000349736 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
CSNK2A1-202ENST00000349736 ERICH6Q7L0X2 663 aa13.08□□□□□ -0.32
CSNK2A1-202ENST00000349736 PKD2Q13563 968 aa13.06□□□□□ -0.32
CSNK2A1-202ENST00000349736 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
CSNK2A1-202ENST00000349736 FMN1Q68DA7 1419 aa13.04□□□□□ -0.32
CSNK2A1-202ENST00000349736 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
CSNK2A1-202ENST00000349736 DCAF11Q8TEB1 546 aa13.04□□□□□ -0.32
CSNK2A1-202ENST00000349736 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
CSNK2A1-202ENST00000349736 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.32
CSNK2A1-202ENST00000349736 PEG3Q9GZU2 1588 aa13.02□□□□□ -0.33
CSNK2A1-202ENST00000349736 HMGXB3Q12766 1538 aa13.02□□□□□ -0.33
CSNK2A1-202ENST00000349736 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
CSNK2A1-202ENST00000349736 BCL11AQ9H165 835 aa13□□□□□ -0.33
CSNK2A1-202ENST00000349736 TMC1Q8TDI8 760 aa12.99□□□□□ -0.33
CSNK2A1-202ENST00000349736 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
CSNK2A1-202ENST00000349736 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
CSNK2A1-202ENST00000349736 NUP155O75694 1391 aa12.94□□□□□ -0.34
CSNK2A1-202ENST00000349736 CC2D1BQ5T0F9 858 aaKnown RBP12.93□□□□□ -0.34
CSNK2A1-202ENST00000349736 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
CSNK2A1-202ENST00000349736 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
CSNK2A1-202ENST00000349736 URB2Q14146 1524 aaKnown RBP12.92□□□□□ -0.34
CSNK2A1-202ENST00000349736 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
CSNK2A1-202ENST00000349736 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
CSNK2A1-202ENST00000349736 NUTM2DQ5VT03 806 aaPredicted RBP12.9□□□□□ -0.34
CSNK2A1-202ENST00000349736 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
CSNK2A1-202ENST00000349736 TNNT2P45379 298 aaPredicted RBP12.89□□□□□ -0.35
CSNK2A1-202ENST00000349736 CCDC184Q52MB2 194 aa12.88□□□□□ -0.35
CSNK2A1-202ENST00000349736 B4GALNT3Q6L9W6 998 aa12.88□□□□□ -0.35
CSNK2A1-202ENST00000349736 CASKIN1Q8WXD9 1431 aa12.87□□□□□ -0.35
CSNK2A1-202ENST00000349736 NPM2Q86SE8 214 aaKnown RBP12.87□□□□□ -0.35
CSNK2A1-202ENST00000349736 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
CSNK2A1-202ENST00000349736 CDK13Q14004 1512 aaKnown RBP12.87□□□□□ -0.35
CSNK2A1-202ENST00000349736 SAFB2Q14151 953 aaKnown RBP eCLIP12.87□□□□□ -0.35
CSNK2A1-202ENST00000349736 NBPF8Q3BBV2 869 aa12.86□□□□□ -0.35
CSNK2A1-202ENST00000349736 GGT6Q6P531 493 aa12.86□□□□□ -0.35
CSNK2A1-202ENST00000349736 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
CSNK2A1-202ENST00000349736 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
CSNK2A1-202ENST00000349736 TIAM1Q13009 1591 aa12.84□□□□□ -0.35
CSNK2A1-202ENST00000349736 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
CSNK2A1-202ENST00000349736 PCF11O94913 1555 aaKnown RBP12.83□□□□□ -0.36
CSNK2A1-202ENST00000349736 PTPRKQ15262 1439 aa12.83□□□□□ -0.36
CSNK2A1-202ENST00000349736 CARMIL2Q6F5E8 1435 aa12.83□□□□□ -0.36
CSNK2A1-202ENST00000349736 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
CSNK2A1-202ENST00000349736 ABCA10Q8WWZ4 1543 aa12.82□□□□□ -0.36
CSNK2A1-202ENST00000349736 MLECQ14165 292 aa12.82□□□□□ -0.36
CSNK2A1-202ENST00000349736 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
CSNK2A1-202ENST00000349736 NEUROD2Q15784 382 aa12.82□□□□□ -0.36
CSNK2A1-202ENST00000349736 DNMBPQ6XZF7 1577 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms